data_7WCE # _model_server_result.job_id pL8BzuUdZm48ruFCG3Y_ug _model_server_result.datetime_utc '2024-10-11 00:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 7WCE # _exptl.entry_id 7WCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7WCE _cell.length_a 72.401 _cell.length_b 72.401 _cell.length_c 65.776 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 224 n n C1 C2 GOL sing 225 n n C1 H11 GOL sing 226 n n C1 H12 GOL sing 227 n n O1 HO1 GOL sing 228 n n C2 O2 GOL sing 229 n n C2 C3 GOL sing 230 n n C2 H2 GOL sing 231 n n O2 HO2 GOL sing 232 n n C3 O3 GOL sing 233 n n C3 H31 GOL sing 234 n n C3 H32 GOL sing 235 n n O3 HO3 GOL sing 236 n n # _atom_sites.entry_id 7WCE _atom_sites.fract_transf_matrix[1][1] 0.013812 _atom_sites.fract_transf_matrix[1][2] 0.007974 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 1 SO4 SO4 . C 2 SO4 A 1 302 2 SO4 SO4 . D 3 8Z3 A 1 303 1 8Z3 MOL . E 4 GOL A 1 304 1 GOL GOL . F 5 HOH A 1 401 63 HOH HOH . F 5 HOH A 2 402 39 HOH HOH . F 5 HOH A 3 403 77 HOH HOH . F 5 HOH A 4 404 36 HOH HOH . F 5 HOH A 5 405 46 HOH HOH . F 5 HOH A 6 406 66 HOH HOH . F 5 HOH A 7 407 28 HOH HOH . F 5 HOH A 8 408 40 HOH HOH . F 5 HOH A 9 409 22 HOH HOH . F 5 HOH A 10 410 29 HOH HOH . F 5 HOH A 11 411 43 HOH HOH . F 5 HOH A 12 412 8 HOH HOH . F 5 HOH A 13 413 50 HOH HOH . F 5 HOH A 14 414 55 HOH HOH . F 5 HOH A 15 415 37 HOH HOH . F 5 HOH A 16 416 12 HOH HOH . F 5 HOH A 17 417 19 HOH HOH . F 5 HOH A 18 418 72 HOH HOH . F 5 HOH A 19 419 2 HOH HOH . F 5 HOH A 20 420 11 HOH HOH . F 5 HOH A 21 421 4 HOH HOH . F 5 HOH A 22 422 20 HOH HOH . F 5 HOH A 23 423 7 HOH HOH . F 5 HOH A 24 424 3 HOH HOH . F 5 HOH A 25 425 6 HOH HOH . F 5 HOH A 26 426 61 HOH HOH . F 5 HOH A 27 427 9 HOH HOH . F 5 HOH A 28 428 27 HOH HOH . F 5 HOH A 29 429 78 HOH HOH . F 5 HOH A 30 430 25 HOH HOH . F 5 HOH A 31 431 38 HOH HOH . F 5 HOH A 32 432 26 HOH HOH . F 5 HOH A 33 433 30 HOH HOH . F 5 HOH A 34 434 1 HOH HOH . F 5 HOH A 35 435 41 HOH HOH . F 5 HOH A 36 436 33 HOH HOH . F 5 HOH A 37 437 31 HOH HOH . F 5 HOH A 38 438 45 HOH HOH . F 5 HOH A 39 439 21 HOH HOH . F 5 HOH A 40 440 23 HOH HOH . F 5 HOH A 41 441 65 HOH HOH . F 5 HOH A 42 442 76 HOH HOH . F 5 HOH A 43 443 58 HOH HOH . F 5 HOH A 44 444 10 HOH HOH . F 5 HOH A 45 445 5 HOH HOH . F 5 HOH A 46 446 24 HOH HOH . F 5 HOH A 47 447 75 HOH HOH . F 5 HOH A 48 448 13 HOH HOH . F 5 HOH A 49 449 15 HOH HOH . F 5 HOH A 50 450 32 HOH HOH . F 5 HOH A 51 451 68 HOH HOH . F 5 HOH A 52 452 17 HOH HOH . F 5 HOH A 53 453 42 HOH HOH . F 5 HOH A 54 454 52 HOH HOH . F 5 HOH A 55 455 44 HOH HOH . F 5 HOH A 56 456 56 HOH HOH . F 5 HOH A 57 457 14 HOH HOH . F 5 HOH A 58 458 35 HOH HOH . F 5 HOH A 59 459 51 HOH HOH . F 5 HOH A 60 460 18 HOH HOH . F 5 HOH A 61 461 16 HOH HOH . F 5 HOH A 62 462 49 HOH HOH . F 5 HOH A 63 463 54 HOH HOH . F 5 HOH A 64 464 73 HOH HOH . F 5 HOH A 65 465 62 HOH HOH . F 5 HOH A 66 466 34 HOH HOH . F 5 HOH A 67 467 57 HOH HOH . F 5 HOH A 68 468 53 HOH HOH . F 5 HOH A 69 469 64 HOH HOH . F 5 HOH A 70 470 74 HOH HOH . F 5 HOH A 71 471 60 HOH HOH . F 5 HOH A 72 472 71 HOH HOH . F 5 HOH A 73 473 47 HOH HOH . F 5 HOH A 74 474 69 HOH HOH . F 5 HOH A 75 475 48 HOH HOH . F 5 HOH A 76 476 59 HOH HOH . F 5 HOH A 77 477 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -26.331 11.238 9.674 1 63.77 ? C1 GOL 304 A 1 HETATM 2 O O1 GOL . . . E 4 -26.706 12.192 10.64 1 58.08 ? O1 GOL 304 A 1 HETATM 3 C C2 GOL . . . E 4 -25.585 11.925 8.536 1 69.69 ? C2 GOL 304 A 1 HETATM 4 O O2 GOL . . . E 4 -24.227 12.092 8.89 1 68.64 ? O2 GOL 304 A 1 HETATM 5 C C3 GOL . . . E 4 -25.676 11.069 7.277 1 68.95 ? C3 GOL 304 A 1 HETATM 6 O O3 GOL . . . E 4 -25.636 11.914 6.15 1 51.68 ? O3 GOL 304 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #