data_7WCI
#
_model_server_result.job_id            koOwuY1ShERQ9ChrgujgpA 
_model_server_result.datetime_utc      '2024-11-24 03:57:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wci 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    7WCI 
#
_exptl.entry_id    7WCI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              158.238 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'nonanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WCI 
_cell.length_a            54.674 
_cell.length_b            69.633 
_cell.length_c            33.671 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WCI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C9 H18 O2' 
_chem_comp.formula_weight    158.238 
_chem_comp.id                KNA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'nonanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C1 KNA doub 173 n n 
C1 C2 KNA sing 174 n n 
C1 O1 KNA sing 175 n n 
O1 HO1 KNA sing 176 n n 
C3 C2 KNA sing 177 n n 
C2 H2 KNA sing 178 n n 
C2 H2A KNA sing 179 n n 
C3 C4 KNA sing 180 n n 
C3 H3 KNA sing 181 n n 
C3 H3A KNA sing 182 n n 
C5 C4 KNA sing 183 n n 
C4 H4 KNA sing 184 n n 
C4 H4A KNA sing 185 n n 
C5 C6 KNA sing 186 n n 
C5 H5 KNA sing 187 n n 
C5 H5A KNA sing 188 n n 
C6 C7 KNA sing 189 n n 
C6 H6 KNA sing 190 n n 
C6 H6A KNA sing 191 n n 
C7 C8 KNA sing 192 n n 
C7 H7 KNA sing 193 n n 
C7 H7A KNA sing 194 n n 
C8 C9 KNA sing 195 n n 
C8 H8 KNA sing 196 n n 
C8 H8A KNA sing 197 n n 
C9 H9 KNA sing 198 n n 
C9 H9A KNA sing 199 n n 
C9 H9B KNA sing 200 n n 
#
_atom_sites.entry_id                     7WCI 
_atom_sites.fract_transf_matrix[1][1]    0.01829 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014361 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029699 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 KNA A 1 201 200 KNA C99 . 
C 2 KNA A 1 202 210 KNA C99 . 
D 3 P6G A 1 203 220 P6G P6G . 
E 3 P6G A 1 204 230 P6G P6G . 
F 4 HOH A 1 301 1205 HOH HOH . 
F 4 HOH A 2 302 1194 HOH HOH . 
F 4 HOH A 3 303 1124 HOH HOH . 
F 4 HOH A 4 304 1183 HOH HOH . 
F 4 HOH A 5 305 1067 HOH HOH . 
F 4 HOH A 6 306 1064 HOH HOH . 
F 4 HOH A 7 307 1180 HOH HOH . 
F 4 HOH A 8 308 1420 HOH HOH . 
F 4 HOH A 9 309 1276 HOH HOH . 
F 4 HOH A 10 310 1254 HOH HOH . 
F 4 HOH A 11 311 1073 HOH HOH . 
F 4 HOH A 12 312 1085 HOH HOH . 
F 4 HOH A 13 313 1244 HOH HOH . 
F 4 HOH A 14 314 1357 HOH HOH . 
F 4 HOH A 15 315 1030 HOH HOH . 
F 4 HOH A 16 316 1136 HOH HOH . 
F 4 HOH A 17 317 1089 HOH HOH . 
F 4 HOH A 18 318 1007 HOH HOH . 
F 4 HOH A 19 319 1249 HOH HOH . 
F 4 HOH A 20 320 1248 HOH HOH . 
F 4 HOH A 21 321 1358 HOH HOH . 
F 4 HOH A 22 322 1065 HOH HOH . 
F 4 HOH A 23 323 1256 HOH HOH . 
F 4 HOH A 24 324 1048 HOH HOH . 
F 4 HOH A 25 325 1222 HOH HOH . 
F 4 HOH A 26 326 1310 HOH HOH . 
F 4 HOH A 27 327 1266 HOH HOH . 
F 4 HOH A 28 328 1096 HOH HOH . 
F 4 HOH A 29 329 1261 HOH HOH . 
F 4 HOH A 30 330 1134 HOH HOH . 
F 4 HOH A 31 331 1404 HOH HOH . 
F 4 HOH A 32 332 1229 HOH HOH . 
F 4 HOH A 33 333 1130 HOH HOH . 
F 4 HOH A 34 334 1123 HOH HOH . 
F 4 HOH A 35 335 1052 HOH HOH . 
F 4 HOH A 36 336 1342 HOH HOH . 
F 4 HOH A 37 337 1038 HOH HOH . 
F 4 HOH A 38 338 1270 HOH HOH . 
F 4 HOH A 39 339 1053 HOH HOH . 
F 4 HOH A 40 340 1369 HOH HOH . 
F 4 HOH A 41 341 1075 HOH HOH . 
F 4 HOH A 42 342 1118 HOH HOH . 
F 4 HOH A 43 343 1099 HOH HOH . 
F 4 HOH A 44 344 1093 HOH HOH . 
F 4 HOH A 45 345 1046 HOH HOH . 
F 4 HOH A 46 346 1090 HOH HOH . 
F 4 HOH A 47 347 1115 HOH HOH . 
F 4 HOH A 48 348 1051 HOH HOH . 
F 4 HOH A 49 349 1004 HOH HOH . 
F 4 HOH A 50 350 1021 HOH HOH . 
F 4 HOH A 51 351 1393 HOH HOH . 
F 4 HOH A 52 352 1110 HOH HOH . 
F 4 HOH A 53 353 1091 HOH HOH . 
F 4 HOH A 54 354 1061 HOH HOH . 
F 4 HOH A 55 355 1144 HOH HOH . 
F 4 HOH A 56 356 1041 HOH HOH . 
F 4 HOH A 57 357 1059 HOH HOH . 
F 4 HOH A 58 358 1009 HOH HOH . 
F 4 HOH A 59 359 1142 HOH HOH . 
F 4 HOH A 60 360 1019 HOH HOH . 
F 4 HOH A 61 361 1024 HOH HOH . 
F 4 HOH A 62 362 1255 HOH HOH . 
F 4 HOH A 63 363 1011 HOH HOH . 
F 4 HOH A 64 364 1071 HOH HOH . 
F 4 HOH A 65 365 1133 HOH HOH . 
F 4 HOH A 66 366 1397 HOH HOH . 
F 4 HOH A 67 367 1435 HOH HOH . 
F 4 HOH A 68 368 1148 HOH HOH . 
F 4 HOH A 69 369 1062 HOH HOH . 
F 4 HOH A 70 370 1042 HOH HOH . 
F 4 HOH A 71 371 1060 HOH HOH . 
F 4 HOH A 72 372 1017 HOH HOH . 
F 4 HOH A 73 373 1140 HOH HOH . 
F 4 HOH A 74 374 1117 HOH HOH . 
F 4 HOH A 75 375 1103 HOH HOH . 
F 4 HOH A 76 376 1066 HOH HOH . 
F 4 HOH A 77 377 1076 HOH HOH . 
F 4 HOH A 78 378 1079 HOH HOH . 
F 4 HOH A 79 379 1173 HOH HOH . 
F 4 HOH A 80 380 1035 HOH HOH . 
F 4 HOH A 81 381 1268 HOH HOH . 
F 4 HOH A 82 382 1402 HOH HOH . 
F 4 HOH A 83 383 1083 HOH HOH . 
F 4 HOH A 84 384 1106 HOH HOH . 
F 4 HOH A 85 385 1086 HOH HOH . 
F 4 HOH A 86 386 1112 HOH HOH . 
F 4 HOH A 87 387 1284 HOH HOH . 
F 4 HOH A 88 388 1147 HOH HOH . 
F 4 HOH A 89 389 1155 HOH HOH . 
F 4 HOH A 90 390 1044 HOH HOH . 
F 4 HOH A 91 391 1077 HOH HOH . 
F 4 HOH A 92 392 1098 HOH HOH . 
F 4 HOH A 93 393 1028 HOH HOH . 
F 4 HOH A 94 394 1078 HOH HOH . 
F 4 HOH A 95 395 1146 HOH HOH . 
F 4 HOH A 96 396 1010 HOH HOH . 
F 4 HOH A 97 397 1108 HOH HOH . 
F 4 HOH A 98 398 1191 HOH HOH . 
F 4 HOH A 99 399 1293 HOH HOH . 
F 4 HOH A 100 400 1178 HOH HOH . 
F 4 HOH A 101 401 1037 HOH HOH . 
F 4 HOH A 102 402 1116 HOH HOH . 
F 4 HOH A 103 403 1259 HOH HOH . 
F 4 HOH A 104 404 1026 HOH HOH . 
F 4 HOH A 105 405 1145 HOH HOH . 
F 4 HOH A 106 406 1022 HOH HOH . 
F 4 HOH A 107 407 1097 HOH HOH . 
F 4 HOH A 108 408 1181 HOH HOH . 
F 4 HOH A 109 409 1252 HOH HOH . 
F 4 HOH A 110 410 1034 HOH HOH . 
F 4 HOH A 111 411 1126 HOH HOH . 
F 4 HOH A 112 412 1095 HOH HOH . 
F 4 HOH A 113 413 1023 HOH HOH . 
F 4 HOH A 114 414 1163 HOH HOH . 
F 4 HOH A 115 415 1137 HOH HOH . 
F 4 HOH A 116 416 1040 HOH HOH . 
F 4 HOH A 117 417 1088 HOH HOH . 
F 4 HOH A 118 418 1025 HOH HOH . 
F 4 HOH A 119 419 1165 HOH HOH . 
F 4 HOH A 120 420 1029 HOH HOH . 
F 4 HOH A 121 421 1055 HOH HOH . 
F 4 HOH A 122 422 1251 HOH HOH . 
F 4 HOH A 123 423 1279 HOH HOH . 
F 4 HOH A 124 424 1087 HOH HOH . 
F 4 HOH A 125 425 1101 HOH HOH . 
F 4 HOH A 126 426 1018 HOH HOH . 
F 4 HOH A 127 427 1111 HOH HOH . 
F 4 HOH A 128 428 1127 HOH HOH . 
F 4 HOH A 129 429 1105 HOH HOH . 
F 4 HOH A 130 430 1353 HOH HOH . 
F 4 HOH A 131 431 1242 HOH HOH . 
F 4 HOH A 132 432 1143 HOH HOH . 
F 4 HOH A 133 433 1125 HOH HOH . 
F 4 HOH A 134 434 1277 HOH HOH . 
F 4 HOH A 135 435 1153 HOH HOH . 
F 4 HOH A 136 436 1104 HOH HOH . 
F 4 HOH A 137 437 1221 HOH HOH . 
F 4 HOH A 138 438 1070 HOH HOH . 
F 4 HOH A 139 439 1109 HOH HOH . 
F 4 HOH A 140 440 1243 HOH HOH . 
F 4 HOH A 141 441 1043 HOH HOH . 
F 4 HOH A 142 442 1005 HOH HOH . 
F 4 HOH A 143 443 1141 HOH HOH . 
F 4 HOH A 144 444 1020 HOH HOH . 
F 4 HOH A 145 445 1299 HOH HOH . 
F 4 HOH A 146 446 1072 HOH HOH . 
F 4 HOH A 147 447 1102 HOH HOH . 
F 4 HOH A 148 448 1271 HOH HOH . 
F 4 HOH A 149 449 1258 HOH HOH . 
F 4 HOH A 150 450 1157 HOH HOH . 
F 4 HOH A 151 451 1003 HOH HOH . 
F 4 HOH A 152 452 1084 HOH HOH . 
F 4 HOH A 153 453 1352 HOH HOH . 
F 4 HOH A 154 454 1047 HOH HOH . 
F 4 HOH A 155 455 1430 HOH HOH . 
F 4 HOH A 156 456 1439 HOH HOH . 
F 4 HOH A 157 457 1330 HOH HOH . 
F 4 HOH A 158 458 1359 HOH HOH . 
F 4 HOH A 159 459 1237 HOH HOH . 
F 4 HOH A 160 460 1162 HOH HOH . 
F 4 HOH A 161 461 1204 HOH HOH . 
F 4 HOH A 162 462 1331 HOH HOH . 
F 4 HOH A 163 463 1006 HOH HOH . 
F 4 HOH A 164 464 1063 HOH HOH . 
F 4 HOH A 165 465 1365 HOH HOH . 
F 4 HOH A 166 466 1429 HOH HOH . 
F 4 HOH A 167 467 1049 HOH HOH . 
F 4 HOH A 168 468 1412 HOH HOH . 
F 4 HOH A 169 469 1383 HOH HOH . 
F 4 HOH A 170 470 1218 HOH HOH . 
F 4 HOH A 171 471 1175 HOH HOH . 
F 4 HOH A 172 472 1438 HOH HOH . 
F 4 HOH A 173 473 1423 HOH HOH . 
F 4 HOH A 174 474 1171 HOH HOH . 
F 4 HOH A 175 475 1002 HOH HOH . 
F 4 HOH A 176 476 1027 HOH HOH . 
F 4 HOH A 177 477 1036 HOH HOH . 
F 4 HOH A 178 478 1107 HOH HOH . 
F 4 HOH A 179 479 1113 HOH HOH . 
F 4 HOH A 180 480 1326 HOH HOH . 
F 4 HOH A 181 481 1280 HOH HOH . 
F 4 HOH A 182 482 1408 HOH HOH . 
F 4 HOH A 183 483 1054 HOH HOH . 
F 4 HOH A 184 484 1114 HOH HOH . 
F 4 HOH A 185 485 1227 HOH HOH . 
F 4 HOH A 186 486 1267 HOH HOH . 
F 4 HOH A 187 487 1092 HOH HOH . 
F 4 HOH A 188 488 1050 HOH HOH . 
F 4 HOH A 189 489 1375 HOH HOH . 
F 4 HOH A 190 490 1335 HOH HOH . 
F 4 HOH A 191 491 1274 HOH HOH . 
F 4 HOH A 192 492 1058 HOH HOH . 
F 4 HOH A 193 493 1325 HOH HOH . 
F 4 HOH A 194 494 1230 HOH HOH . 
F 4 HOH A 195 495 1442 HOH HOH . 
F 4 HOH A 196 496 1008 HOH HOH . 
F 4 HOH A 197 497 1322 HOH HOH . 
F 4 HOH A 198 498 1275 HOH HOH . 
F 4 HOH A 199 499 1432 HOH HOH . 
F 4 HOH A 200 500 1288 HOH HOH . 
F 4 HOH A 201 501 1327 HOH HOH . 
F 4 HOH A 202 502 1057 HOH HOH . 
F 4 HOH A 203 503 1100 HOH HOH . 
F 4 HOH A 204 504 1045 HOH HOH . 
F 4 HOH A 205 505 1316 HOH HOH . 
F 4 HOH A 206 506 1360 HOH HOH . 
F 4 HOH A 207 507 1179 HOH HOH . 
F 4 HOH A 208 508 1039 HOH HOH . 
F 4 HOH A 209 509 1332 HOH HOH . 
F 4 HOH A 210 510 1319 HOH HOH . 
F 4 HOH A 211 511 1328 HOH HOH . 
F 4 HOH A 212 512 1193 HOH HOH . 
F 4 HOH A 213 513 1440 HOH HOH . 
F 4 HOH A 214 514 1032 HOH HOH . 
F 4 HOH A 215 515 1334 HOH HOH . 
F 4 HOH A 216 516 1151 HOH HOH . 
F 4 HOH A 217 517 1396 HOH HOH . 
F 4 HOH A 218 518 1240 HOH HOH . 
F 4 HOH A 219 519 1001 HOH HOH . 
F 4 HOH A 220 520 1241 HOH HOH . 
F 4 HOH A 221 521 1031 HOH HOH . 
F 4 HOH A 222 522 1298 HOH HOH . 
F 4 HOH A 223 523 1250 HOH HOH . 
F 4 HOH A 224 524 1341 HOH HOH . 
F 4 HOH A 225 525 1209 HOH HOH . 
F 4 HOH A 226 526 1441 HOH HOH . 
F 4 HOH A 227 527 1245 HOH HOH . 
F 4 HOH A 228 528 1401 HOH HOH . 
F 4 HOH A 229 529 1392 HOH HOH . 
F 4 HOH A 230 530 1231 HOH HOH . 
F 4 HOH A 231 531 1340 HOH HOH . 
F 4 HOH A 232 532 1056 HOH HOH . 
F 4 HOH A 233 533 1234 HOH HOH . 
F 4 HOH A 234 534 1431 HOH HOH . 
F 4 HOH A 235 535 1329 HOH HOH . 
F 4 HOH A 236 536 1233 HOH HOH . 
F 4 HOH A 237 537 1343 HOH HOH . 
F 4 HOH A 238 538 1161 HOH HOH . 
F 4 HOH A 239 539 1434 HOH HOH . 
F 4 HOH A 240 540 1169 HOH HOH . 
F 4 HOH A 241 541 1082 HOH HOH . 
F 4 HOH A 242 542 1346 HOH HOH . 
F 4 HOH A 243 543 1232 HOH HOH . 
F 4 HOH A 244 544 1198 HOH HOH . 
F 4 HOH A 245 545 1176 HOH HOH . 
F 4 HOH A 246 546 1236 HOH HOH . 
F 4 HOH A 247 547 1235 HOH HOH . 
F 4 HOH A 248 548 1428 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 KNA . . . C 2 8.159 -25.961 -3.095 0.9 16.68 ? C1 KNA 202 A 1 
HETATM 2 O O1 KNA . . . C 2 8.914 -26.422 -2.288 0.9 20.75 ? O1 KNA 202 A 1 
HETATM 3 C C2 KNA . . . C 2 7.221 -24.816 -2.787 0.9 16.95 ? C2 KNA 202 A 1 
HETATM 4 O O2 KNA . . . C 2 8.127 -26.552 -4.211 0.9 23.2 ? O2 KNA 202 A 1 
HETATM 5 C C3 KNA . . . C 2 7.388 -24.205 -1.412 0.9 17.25 ? C3 KNA 202 A 1 
HETATM 6 C C4 KNA . . . C 2 6.514 -22.997 -1.289 0.9 17.93 ? C4 KNA 202 A 1 
HETATM 7 C C5 KNA . . . C 2 6.19 -22.506 0.124 0.9 17.57 ? C5 KNA 202 A 1 
HETATM 8 C C6 KNA . . . C 2 7.308 -22.144 1.026 0.9 18.93 ? C6 KNA 202 A 1 
HETATM 9 C C7 KNA . . . C 2 8.347 -21.233 0.429 0.9 17.9 ? C7 KNA 202 A 1 
HETATM 10 C C8 KNA . . . C 2 9.43 -20.789 1.422 0.9 14.8 ? C8 KNA 202 A 1 
HETATM 11 C C9 KNA . . . C 2 10.697 -20.392 0.767 0.9 12.9 ? C9 KNA 202 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           11 
#