data_7WDJ # _model_server_result.job_id eisLnXX7fwvAyx5EVuaYDg _model_server_result.datetime_utc '2024-11-23 20:25:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wdj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7WDJ # _exptl.entry_id 7WDJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WDJ _cell.length_a 54.62 _cell.length_b 69.733 _cell.length_c 33.617 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WDJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 288 n n O1 H1 P6G sing 289 n n C2 C3 P6G sing 290 n n C2 H21 P6G sing 291 n n C2 H22 P6G sing 292 n n C3 O4 P6G sing 293 n n C3 H31 P6G sing 294 n n C3 H32 P6G sing 295 n n O4 C5 P6G sing 296 n n C5 C6 P6G sing 297 n n C5 H51 P6G sing 298 n n C5 H52 P6G sing 299 n n C6 O7 P6G sing 300 n n C6 H61 P6G sing 301 n n C6 H62 P6G sing 302 n n O7 C8 P6G sing 303 n n C8 C9 P6G sing 304 n n C8 H81 P6G sing 305 n n C8 H82 P6G sing 306 n n C9 O10 P6G sing 307 n n C9 H91 P6G sing 308 n n C9 H92 P6G sing 309 n n O10 C11 P6G sing 310 n n C11 C12 P6G sing 311 n n C11 H111 P6G sing 312 n n C11 H112 P6G sing 313 n n C12 O13 P6G sing 314 n n C12 H121 P6G sing 315 n n C12 H122 P6G sing 316 n n O13 C14 P6G sing 317 n n C14 C15 P6G sing 318 n n C14 H141 P6G sing 319 n n C14 H142 P6G sing 320 n n C15 O16 P6G sing 321 n n C15 H151 P6G sing 322 n n C15 H152 P6G sing 323 n n O16 C17 P6G sing 324 n n C17 C18 P6G sing 325 n n C17 H171 P6G sing 326 n n C17 H172 P6G sing 327 n n C18 O19 P6G sing 328 n n C18 H181 P6G sing 329 n n C18 H182 P6G sing 330 n n O19 H19 P6G sing 331 n n # _atom_sites.entry_id 7WDJ _atom_sites.fract_transf_matrix[1][1] 0.018308 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029747 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EIC A 1 201 200 EIC LIN . C 3 P6G A 1 202 210 P6G P6G . D 3 P6G A 1 203 211 P6G P6G . E 4 HOH A 1 301 1123 HOH HOH . E 4 HOH A 2 302 1094 HOH HOH . E 4 HOH A 3 303 1103 HOH HOH . E 4 HOH A 4 304 1124 HOH HOH . E 4 HOH A 5 305 1082 HOH HOH . E 4 HOH A 6 306 1151 HOH HOH . E 4 HOH A 7 307 1039 HOH HOH . E 4 HOH A 8 308 1122 HOH HOH . E 4 HOH A 9 309 1143 HOH HOH . E 4 HOH A 10 310 1007 HOH HOH . E 4 HOH A 11 311 1099 HOH HOH . E 4 HOH A 12 312 1041 HOH HOH . E 4 HOH A 13 313 1002 HOH HOH . E 4 HOH A 14 314 1043 HOH HOH . E 4 HOH A 15 315 1113 HOH HOH . E 4 HOH A 16 316 1102 HOH HOH . E 4 HOH A 17 317 1019 HOH HOH . E 4 HOH A 18 318 1052 HOH HOH . E 4 HOH A 19 319 1064 HOH HOH . E 4 HOH A 20 320 1140 HOH HOH . E 4 HOH A 21 321 1023 HOH HOH . E 4 HOH A 22 322 1050 HOH HOH . E 4 HOH A 23 323 1073 HOH HOH . E 4 HOH A 24 324 1098 HOH HOH . E 4 HOH A 25 325 1074 HOH HOH . E 4 HOH A 26 326 1100 HOH HOH . E 4 HOH A 27 327 1097 HOH HOH . E 4 HOH A 28 328 1028 HOH HOH . E 4 HOH A 29 329 1057 HOH HOH . E 4 HOH A 30 330 1081 HOH HOH . E 4 HOH A 31 331 1053 HOH HOH . E 4 HOH A 32 332 1139 HOH HOH . E 4 HOH A 33 333 1009 HOH HOH . E 4 HOH A 34 334 1036 HOH HOH . E 4 HOH A 35 335 1005 HOH HOH . E 4 HOH A 36 336 1090 HOH HOH . E 4 HOH A 37 337 1065 HOH HOH . E 4 HOH A 38 338 1013 HOH HOH . E 4 HOH A 39 339 1047 HOH HOH . E 4 HOH A 40 340 1054 HOH HOH . E 4 HOH A 41 341 1059 HOH HOH . E 4 HOH A 42 342 1008 HOH HOH . E 4 HOH A 43 343 1084 HOH HOH . E 4 HOH A 44 344 1109 HOH HOH . E 4 HOH A 45 345 1137 HOH HOH . E 4 HOH A 46 346 1003 HOH HOH . E 4 HOH A 47 347 1108 HOH HOH . E 4 HOH A 48 348 1120 HOH HOH . E 4 HOH A 49 349 1190 HOH HOH . E 4 HOH A 50 350 1032 HOH HOH . E 4 HOH A 51 351 1011 HOH HOH . E 4 HOH A 52 352 1075 HOH HOH . E 4 HOH A 53 353 1055 HOH HOH . E 4 HOH A 54 354 1025 HOH HOH . E 4 HOH A 55 355 1020 HOH HOH . E 4 HOH A 56 356 1089 HOH HOH . E 4 HOH A 57 357 1010 HOH HOH . E 4 HOH A 58 358 1046 HOH HOH . E 4 HOH A 59 359 1022 HOH HOH . E 4 HOH A 60 360 1012 HOH HOH . E 4 HOH A 61 361 1034 HOH HOH . E 4 HOH A 62 362 1087 HOH HOH . E 4 HOH A 63 363 1070 HOH HOH . E 4 HOH A 64 364 1107 HOH HOH . E 4 HOH A 65 365 1056 HOH HOH . E 4 HOH A 66 366 1048 HOH HOH . E 4 HOH A 67 367 1125 HOH HOH . E 4 HOH A 68 368 1077 HOH HOH . E 4 HOH A 69 369 1118 HOH HOH . E 4 HOH A 70 370 1067 HOH HOH . E 4 HOH A 71 371 1080 HOH HOH . E 4 HOH A 72 372 1132 HOH HOH . E 4 HOH A 73 373 1076 HOH HOH . E 4 HOH A 74 374 1014 HOH HOH . E 4 HOH A 75 375 1096 HOH HOH . E 4 HOH A 76 376 1027 HOH HOH . E 4 HOH A 77 377 1072 HOH HOH . E 4 HOH A 78 378 1060 HOH HOH . E 4 HOH A 79 379 1116 HOH HOH . E 4 HOH A 80 380 1177 HOH HOH . E 4 HOH A 81 381 1051 HOH HOH . E 4 HOH A 82 382 1018 HOH HOH . E 4 HOH A 83 383 1017 HOH HOH . E 4 HOH A 84 384 1148 HOH HOH . E 4 HOH A 85 385 1153 HOH HOH . E 4 HOH A 86 386 1066 HOH HOH . E 4 HOH A 87 387 1004 HOH HOH . E 4 HOH A 88 388 1031 HOH HOH . E 4 HOH A 89 389 1086 HOH HOH . E 4 HOH A 90 390 1105 HOH HOH . E 4 HOH A 91 391 1068 HOH HOH . E 4 HOH A 92 392 1062 HOH HOH . E 4 HOH A 93 393 1042 HOH HOH . E 4 HOH A 94 394 1021 HOH HOH . E 4 HOH A 95 395 1088 HOH HOH . E 4 HOH A 96 396 1078 HOH HOH . E 4 HOH A 97 397 1119 HOH HOH . E 4 HOH A 98 398 1035 HOH HOH . E 4 HOH A 99 399 1106 HOH HOH . E 4 HOH A 100 400 1044 HOH HOH . E 4 HOH A 101 401 1038 HOH HOH . E 4 HOH A 102 402 1167 HOH HOH . E 4 HOH A 103 403 1033 HOH HOH . E 4 HOH A 104 404 1130 HOH HOH . E 4 HOH A 105 405 1029 HOH HOH . E 4 HOH A 106 406 1001 HOH HOH . E 4 HOH A 107 407 1063 HOH HOH . E 4 HOH A 108 408 1015 HOH HOH . E 4 HOH A 109 409 1104 HOH HOH . E 4 HOH A 110 410 1037 HOH HOH . E 4 HOH A 111 411 1061 HOH HOH . E 4 HOH A 112 412 1085 HOH HOH . E 4 HOH A 113 413 1045 HOH HOH . E 4 HOH A 114 414 1093 HOH HOH . E 4 HOH A 115 415 1079 HOH HOH . E 4 HOH A 116 416 1135 HOH HOH . E 4 HOH A 117 417 1030 HOH HOH . E 4 HOH A 118 418 1134 HOH HOH . E 4 HOH A 119 419 1095 HOH HOH . E 4 HOH A 120 420 1150 HOH HOH . E 4 HOH A 121 421 1152 HOH HOH . E 4 HOH A 122 422 1145 HOH HOH . E 4 HOH A 123 423 1071 HOH HOH . E 4 HOH A 124 424 1026 HOH HOH . E 4 HOH A 125 425 1083 HOH HOH . E 4 HOH A 126 426 1189 HOH HOH . E 4 HOH A 127 427 1040 HOH HOH . E 4 HOH A 128 428 1114 HOH HOH . E 4 HOH A 129 429 1006 HOH HOH . E 4 HOH A 130 430 1136 HOH HOH . E 4 HOH A 131 431 1155 HOH HOH . E 4 HOH A 132 432 1161 HOH HOH . E 4 HOH A 133 433 1049 HOH HOH . E 4 HOH A 134 434 1101 HOH HOH . E 4 HOH A 135 435 1111 HOH HOH . E 4 HOH A 136 436 1149 HOH HOH . E 4 HOH A 137 437 1170 HOH HOH . E 4 HOH A 138 438 1058 HOH HOH . E 4 HOH A 139 439 1092 HOH HOH . E 4 HOH A 140 440 1069 HOH HOH . E 4 HOH A 141 441 1181 HOH HOH . E 4 HOH A 142 442 1131 HOH HOH . E 4 HOH A 143 443 1091 HOH HOH . E 4 HOH A 144 444 1110 HOH HOH . E 4 HOH A 145 445 1184 HOH HOH . E 4 HOH A 146 446 1138 HOH HOH . E 4 HOH A 147 447 1144 HOH HOH . E 4 HOH A 148 448 1112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7 P6G . . . D 3 -26.814 -5.417 -6.172 0.96 28.29 ? O7 P6G 203 A 1 HETATM 2 C C8 P6G . . . D 3 -25.781 -5.668 -5.174 0.96 73.25 ? C8 P6G 203 A 1 HETATM 3 C C9 P6G . . . D 3 -25.931 -4.813 -4.001 0.96 61.19 ? C9 P6G 203 A 1 HETATM 4 O O10 P6G . . . D 3 -25.908 -3.43 -4.398 0.96 129.21 ? O10 P6G 203 A 1 HETATM 5 C C11 P6G . . . D 3 -25.909 -2.536 -3.234 0.96 132.11 ? C11 P6G 203 A 1 HETATM 6 C C12 P6G . . . D 3 -24.829 -1.31 -3.557 0.96 157.36 ? C12 P6G 203 A 1 HETATM 7 O O13 P6G . . . D 3 -25.102 -0.907 -4.967 0.96 132.31 ? O13 P6G 203 A 1 HETATM 8 C C14 P6G . . . D 3 -24.286 0.199 -5.385 0.96 165.06 ? C14 P6G 203 A 1 HETATM 9 C C15 P6G . . . D 3 -24.947 0.825 -6.675 0.96 153.89 ? C15 P6G 203 A 1 HETATM 10 O O16 P6G . . . D 3 -25.227 -0.118 -7.731 0.96 67.93 ? O16 P6G 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #