data_7WDN
#
_model_server_result.job_id            DSqYkVuVnavHa6qcwzZIzg 
_model_server_result.datetime_utc      '2024-11-22 15:18:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wdn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    7WDN 
#
_exptl.entry_id    7WDN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WDN 
_cell.length_a            202.488 
_cell.length_b            202.488 
_cell.length_c            202.488 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WDN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        211 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-glucose;D-glucose;glucose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GLC sing 83 n n 
C1 O1 GLC sing 84 n n 
C1 O5 GLC sing 85 n n 
C1 H1 GLC sing 86 n n 
C2 C3 GLC sing 87 n n 
C2 O2 GLC sing 88 n n 
C2 H2 GLC sing 89 n n 
C3 C4 GLC sing 90 n n 
C3 O3 GLC sing 91 n n 
C3 H3 GLC sing 92 n n 
C4 C5 GLC sing 93 n n 
C4 O4 GLC sing 94 n n 
C4 H4 GLC sing 95 n n 
C5 C6 GLC sing 96 n n 
C5 O5 GLC sing 97 n n 
C5 H5 GLC sing 98 n n 
C6 O6 GLC sing 99 n n 
C6 H61 GLC sing 100 n n 
C6 H62 GLC sing 101 n n 
O1 HO1 GLC sing 102 n n 
O2 HO2 GLC sing 103 n n 
O3 HO3 GLC sing 104 n n 
O4 HO4 GLC sing 105 n n 
O6 HO6 GLC sing 106 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GLC a-D-glucopyranose 'COMMON NAME' GMML 1 
GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7WDN 
_atom_sites.fract_transf_matrix[1][1]    0.004939 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004939 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GLC A 1 501 501 GLC GLC . 
C 2 GLC A 1 502 502 GLC GLC . 
D 2 GLC A 1 503 503 GLC GLC . 
E 2 GLC A 1 504 504 GLC GLC . 
F 3 HOH A 1 601 167 HOH HOH . 
F 3 HOH A 2 602 188 HOH HOH . 
F 3 HOH A 3 603 153 HOH HOH . 
F 3 HOH A 4 604 132 HOH HOH . 
F 3 HOH A 5 605 174 HOH HOH . 
F 3 HOH A 6 606 149 HOH HOH . 
F 3 HOH A 7 607 16 HOH HOH . 
F 3 HOH A 8 608 185 HOH HOH . 
F 3 HOH A 9 609 46 HOH HOH . 
F 3 HOH A 10 610 34 HOH HOH . 
F 3 HOH A 11 611 140 HOH HOH . 
F 3 HOH A 12 612 156 HOH HOH . 
F 3 HOH A 13 613 50 HOH HOH . 
F 3 HOH A 14 614 184 HOH HOH . 
F 3 HOH A 15 615 113 HOH HOH . 
F 3 HOH A 16 616 17 HOH HOH . 
F 3 HOH A 17 617 54 HOH HOH . 
F 3 HOH A 18 618 25 HOH HOH . 
F 3 HOH A 19 619 27 HOH HOH . 
F 3 HOH A 20 620 203 HOH HOH . 
F 3 HOH A 21 621 109 HOH HOH . 
F 3 HOH A 22 622 135 HOH HOH . 
F 3 HOH A 23 623 217 HOH HOH . 
F 3 HOH A 24 624 37 HOH HOH . 
F 3 HOH A 25 625 94 HOH HOH . 
F 3 HOH A 26 626 59 HOH HOH . 
F 3 HOH A 27 627 82 HOH HOH . 
F 3 HOH A 28 628 152 HOH HOH . 
F 3 HOH A 29 629 53 HOH HOH . 
F 3 HOH A 30 630 38 HOH HOH . 
F 3 HOH A 31 631 197 HOH HOH . 
F 3 HOH A 32 632 60 HOH HOH . 
F 3 HOH A 33 633 83 HOH HOH . 
F 3 HOH A 34 634 151 HOH HOH . 
F 3 HOH A 35 635 199 HOH HOH . 
F 3 HOH A 36 636 127 HOH HOH . 
F 3 HOH A 37 637 18 HOH HOH . 
F 3 HOH A 38 638 1 HOH HOH . 
F 3 HOH A 39 639 139 HOH HOH . 
F 3 HOH A 40 640 6 HOH HOH . 
F 3 HOH A 41 641 77 HOH HOH . 
F 3 HOH A 42 642 22 HOH HOH . 
F 3 HOH A 43 643 211 HOH HOH . 
F 3 HOH A 44 644 202 HOH HOH . 
F 3 HOH A 45 645 73 HOH HOH . 
F 3 HOH A 46 646 9 HOH HOH . 
F 3 HOH A 47 647 180 HOH HOH . 
F 3 HOH A 48 648 118 HOH HOH . 
F 3 HOH A 49 649 136 HOH HOH . 
F 3 HOH A 50 650 43 HOH HOH . 
F 3 HOH A 51 651 75 HOH HOH . 
F 3 HOH A 52 652 194 HOH HOH . 
F 3 HOH A 53 653 117 HOH HOH . 
F 3 HOH A 54 654 176 HOH HOH . 
F 3 HOH A 55 655 128 HOH HOH . 
F 3 HOH A 56 656 24 HOH HOH . 
F 3 HOH A 57 657 186 HOH HOH . 
F 3 HOH A 58 658 74 HOH HOH . 
F 3 HOH A 59 659 84 HOH HOH . 
F 3 HOH A 60 660 134 HOH HOH . 
F 3 HOH A 61 661 20 HOH HOH . 
F 3 HOH A 62 662 42 HOH HOH . 
F 3 HOH A 63 663 72 HOH HOH . 
F 3 HOH A 64 664 81 HOH HOH . 
F 3 HOH A 65 665 198 HOH HOH . 
F 3 HOH A 66 666 4 HOH HOH . 
F 3 HOH A 67 667 103 HOH HOH . 
F 3 HOH A 68 668 205 HOH HOH . 
F 3 HOH A 69 669 14 HOH HOH . 
F 3 HOH A 70 670 193 HOH HOH . 
F 3 HOH A 71 671 206 HOH HOH . 
F 3 HOH A 72 672 108 HOH HOH . 
F 3 HOH A 73 673 88 HOH HOH . 
F 3 HOH A 74 674 213 HOH HOH . 
F 3 HOH A 75 675 11 HOH HOH . 
F 3 HOH A 76 676 52 HOH HOH . 
F 3 HOH A 77 677 15 HOH HOH . 
F 3 HOH A 78 678 142 HOH HOH . 
F 3 HOH A 79 679 207 HOH HOH . 
F 3 HOH A 80 680 87 HOH HOH . 
F 3 HOH A 81 681 124 HOH HOH . 
F 3 HOH A 82 682 12 HOH HOH . 
F 3 HOH A 83 683 170 HOH HOH . 
F 3 HOH A 84 684 48 HOH HOH . 
F 3 HOH A 85 685 30 HOH HOH . 
F 3 HOH A 86 686 93 HOH HOH . 
F 3 HOH A 87 687 31 HOH HOH . 
F 3 HOH A 88 688 181 HOH HOH . 
F 3 HOH A 89 689 7 HOH HOH . 
F 3 HOH A 90 690 70 HOH HOH . 
F 3 HOH A 91 691 115 HOH HOH . 
F 3 HOH A 92 692 159 HOH HOH . 
F 3 HOH A 93 693 150 HOH HOH . 
F 3 HOH A 94 694 58 HOH HOH . 
F 3 HOH A 95 695 143 HOH HOH . 
F 3 HOH A 96 696 178 HOH HOH . 
F 3 HOH A 97 697 65 HOH HOH . 
F 3 HOH A 98 698 33 HOH HOH . 
F 3 HOH A 99 699 51 HOH HOH . 
F 3 HOH A 100 700 209 HOH HOH . 
F 3 HOH A 101 701 215 HOH HOH . 
F 3 HOH A 102 702 112 HOH HOH . 
F 3 HOH A 103 703 97 HOH HOH . 
F 3 HOH A 104 704 201 HOH HOH . 
F 3 HOH A 105 705 23 HOH HOH . 
F 3 HOH A 106 706 63 HOH HOH . 
F 3 HOH A 107 707 133 HOH HOH . 
F 3 HOH A 108 708 69 HOH HOH . 
F 3 HOH A 109 709 106 HOH HOH . 
F 3 HOH A 110 710 171 HOH HOH . 
F 3 HOH A 111 711 91 HOH HOH . 
F 3 HOH A 112 712 98 HOH HOH . 
F 3 HOH A 113 713 187 HOH HOH . 
F 3 HOH A 114 714 148 HOH HOH . 
F 3 HOH A 115 715 26 HOH HOH . 
F 3 HOH A 116 716 96 HOH HOH . 
F 3 HOH A 117 717 105 HOH HOH . 
F 3 HOH A 118 718 36 HOH HOH . 
F 3 HOH A 119 719 164 HOH HOH . 
F 3 HOH A 120 720 173 HOH HOH . 
F 3 HOH A 121 721 129 HOH HOH . 
F 3 HOH A 122 722 71 HOH HOH . 
F 3 HOH A 123 723 10 HOH HOH . 
F 3 HOH A 124 724 2 HOH HOH . 
F 3 HOH A 125 725 175 HOH HOH . 
F 3 HOH A 126 726 154 HOH HOH . 
F 3 HOH A 127 727 61 HOH HOH . 
F 3 HOH A 128 728 99 HOH HOH . 
F 3 HOH A 129 729 195 HOH HOH . 
F 3 HOH A 130 730 120 HOH HOH . 
F 3 HOH A 131 731 80 HOH HOH . 
F 3 HOH A 132 732 212 HOH HOH . 
F 3 HOH A 133 733 29 HOH HOH . 
F 3 HOH A 134 734 62 HOH HOH . 
F 3 HOH A 135 735 126 HOH HOH . 
F 3 HOH A 136 736 78 HOH HOH . 
F 3 HOH A 137 737 32 HOH HOH . 
F 3 HOH A 138 738 218 HOH HOH . 
F 3 HOH A 139 739 104 HOH HOH . 
F 3 HOH A 140 740 35 HOH HOH . 
F 3 HOH A 141 741 116 HOH HOH . 
F 3 HOH A 142 742 95 HOH HOH . 
F 3 HOH A 143 743 101 HOH HOH . 
F 3 HOH A 144 744 219 HOH HOH . 
F 3 HOH A 145 745 141 HOH HOH . 
F 3 HOH A 146 746 8 HOH HOH . 
F 3 HOH A 147 747 76 HOH HOH . 
F 3 HOH A 148 748 85 HOH HOH . 
F 3 HOH A 149 749 45 HOH HOH . 
F 3 HOH A 150 750 102 HOH HOH . 
F 3 HOH A 151 751 57 HOH HOH . 
F 3 HOH A 152 752 40 HOH HOH . 
F 3 HOH A 153 753 100 HOH HOH . 
F 3 HOH A 154 754 5 HOH HOH . 
F 3 HOH A 155 755 110 HOH HOH . 
F 3 HOH A 156 756 210 HOH HOH . 
F 3 HOH A 157 757 161 HOH HOH . 
F 3 HOH A 158 758 21 HOH HOH . 
F 3 HOH A 159 759 19 HOH HOH . 
F 3 HOH A 160 760 68 HOH HOH . 
F 3 HOH A 161 761 13 HOH HOH . 
F 3 HOH A 162 762 130 HOH HOH . 
F 3 HOH A 163 763 208 HOH HOH . 
F 3 HOH A 164 764 196 HOH HOH . 
F 3 HOH A 165 765 131 HOH HOH . 
F 3 HOH A 166 766 155 HOH HOH . 
F 3 HOH A 167 767 166 HOH HOH . 
F 3 HOH A 168 768 169 HOH HOH . 
F 3 HOH A 169 769 39 HOH HOH . 
F 3 HOH A 170 770 172 HOH HOH . 
F 3 HOH A 171 771 183 HOH HOH . 
F 3 HOH A 172 772 122 HOH HOH . 
F 3 HOH A 173 773 67 HOH HOH . 
F 3 HOH A 174 774 114 HOH HOH . 
F 3 HOH A 175 775 56 HOH HOH . 
F 3 HOH A 176 776 177 HOH HOH . 
F 3 HOH A 177 777 163 HOH HOH . 
F 3 HOH A 178 778 168 HOH HOH . 
F 3 HOH A 179 779 125 HOH HOH . 
F 3 HOH A 180 780 86 HOH HOH . 
F 3 HOH A 181 781 92 HOH HOH . 
F 3 HOH A 182 782 192 HOH HOH . 
F 3 HOH A 183 783 119 HOH HOH . 
F 3 HOH A 184 784 44 HOH HOH . 
F 3 HOH A 185 785 216 HOH HOH . 
F 3 HOH A 186 786 49 HOH HOH . 
F 3 HOH A 187 787 41 HOH HOH . 
F 3 HOH A 188 788 111 HOH HOH . 
F 3 HOH A 189 789 3 HOH HOH . 
F 3 HOH A 190 790 191 HOH HOH . 
F 3 HOH A 191 791 79 HOH HOH . 
F 3 HOH A 192 792 162 HOH HOH . 
F 3 HOH A 193 793 200 HOH HOH . 
F 3 HOH A 194 794 146 HOH HOH . 
F 3 HOH A 195 795 107 HOH HOH . 
F 3 HOH A 196 796 28 HOH HOH . 
F 3 HOH A 197 797 182 HOH HOH . 
F 3 HOH A 198 798 214 HOH HOH . 
F 3 HOH A 199 799 204 HOH HOH . 
F 3 HOH A 200 800 220 HOH HOH . 
F 3 HOH A 201 801 121 HOH HOH . 
F 3 HOH A 202 802 160 HOH HOH . 
F 3 HOH A 203 803 157 HOH HOH . 
F 3 HOH A 204 804 89 HOH HOH . 
F 3 HOH A 205 805 189 HOH HOH . 
F 3 HOH A 206 806 138 HOH HOH . 
F 3 HOH A 207 807 64 HOH HOH . 
F 3 HOH A 208 808 145 HOH HOH . 
F 3 HOH A 209 809 147 HOH HOH . 
F 3 HOH A 210 810 47 HOH HOH . 
F 3 HOH A 211 811 137 HOH HOH . 
F 3 HOH A 212 812 144 HOH HOH . 
F 3 HOH A 213 813 90 HOH HOH . 
F 3 HOH A 214 814 55 HOH HOH . 
F 3 HOH A 215 815 190 HOH HOH . 
F 3 HOH A 216 816 66 HOH HOH . 
F 3 HOH A 217 817 165 HOH HOH . 
F 3 HOH A 218 818 221 HOH HOH . 
F 3 HOH A 219 819 158 HOH HOH . 
F 3 HOH A 220 820 123 HOH HOH . 
F 3 HOH A 221 821 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GLC . . . D 2 -26.118 58.776 -57.229 1 64.67 ? C1 GLC 503 A 1 
HETATM 2 C C2 GLC . . . D 2 -24.781 58.821 -58.132 1 65.28 ? C2 GLC 503 A 1 
HETATM 3 C C3 GLC . . . D 2 -24.984 59.584 -59.451 1 60.98 ? C3 GLC 503 A 1 
HETATM 4 C C4 GLC . . . D 2 -26.154 58.791 -60.03 1 69.2 ? C4 GLC 503 A 1 
HETATM 5 C C5 GLC . . . D 2 -27.403 59.227 -59.249 1 51.28 ? C5 GLC 503 A 1 
HETATM 6 C C6 GLC . . . D 2 -28.687 58.964 -59.993 1 48.01 ? C6 GLC 503 A 1 
HETATM 7 O O1 GLC . . . D 2 -26.335 59.89 -56.37 1 56.94 ? O1 GLC 503 A 1 
HETATM 8 O O2 GLC . . . D 2 -23.586 59.284 -57.485 1 57.24 ? O2 GLC 503 A 1 
HETATM 9 O O3 GLC . . . D 2 -23.849 59.769 -60.373 1 35.62 ? O3 GLC 503 A 1 
HETATM 10 O O4 GLC . . . D 2 -26.253 58.976 -61.445 1 119.14 ? O4 GLC 503 A 1 
HETATM 11 O O5 GLC . . . D 2 -27.404 58.632 -57.938 1 52.35 ? O5 GLC 503 A 1 
HETATM 12 O O6 GLC . . . D 2 -29.06 60.267 -60.477 1 34.95 ? O6 GLC 503 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           12 
#