data_7WE4 # _model_server_result.job_id w1_jT-wVVeqGOXqMVyWvRw _model_server_result.datetime_utc '2024-10-19 16:37:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7we4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2005}' # _entry.id 7WE4 # _exptl.entry_id 7WE4 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WE4 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 S N N ? 5 X N N ? 5 BA N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 1803 NAG 2 n B NAG 2 B 2 NAG A 1804 NAG 2 n C NAG 1 C 1 NAG A 1806 NAG 2 n C NAG 2 C 2 NAG A 1807 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 276 A CYS 276 1_555 A SG CYS 319 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 310 A CYS 310 1_555 A SG CYS 325 A CYS 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 857 A CYS 857 1_555 A SG CYS 866 A CYS 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 1310 A CYS 1310 1_555 A SG CYS 1332 A CYS 1332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 A SG CYS 1678 A CYS 1678 1_555 A SG CYS 1692 A CYS 1692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? covale ? covale1 A ND2 ASN 312 A ASN 312 1_555 E C1 NAG . A NAG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.531 ? covale ? covale2 A ND2 ASN 819 A ASN 819 1_555 D C1 NAG . A NAG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale3 A ND2 ASN 1312 A ASN 1312 1_555 F C1 NAG . A NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale4 A ND2 ASN 1328 A ASN 1328 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.585 ? covale ? covale5 A ND2 ASN 1336 A ASN 1336 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale6 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale7 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 113 n n C1 C10 CLR sing 114 n n C1 H11 CLR sing 115 n n C1 H12 CLR sing 116 n n C2 C3 CLR sing 117 n n C2 H21 CLR sing 118 n n C2 H22 CLR sing 119 n n C3 C4 CLR sing 120 n n C3 O1 CLR sing 121 n n C3 H3 CLR sing 122 n n C4 C5 CLR sing 123 n n C4 H41 CLR sing 124 n n C4 H42 CLR sing 125 n n C5 C6 CLR doub 126 n n C5 C10 CLR sing 127 n n C6 C7 CLR sing 128 n n C6 H6 CLR sing 129 n n C7 C8 CLR sing 130 n n C7 H71 CLR sing 131 n n C7 H72 CLR sing 132 n n C8 C9 CLR sing 133 n n C8 C14 CLR sing 134 n n C8 H8 CLR sing 135 n n C9 C10 CLR sing 136 n n C9 C11 CLR sing 137 n n C9 H9 CLR sing 138 n n C10 C19 CLR sing 139 n n C11 C12 CLR sing 140 n n C11 H111 CLR sing 141 n n C11 H112 CLR sing 142 n n C12 C13 CLR sing 143 n n C12 H121 CLR sing 144 n n C12 H122 CLR sing 145 n n C13 C14 CLR sing 146 n n C13 C17 CLR sing 147 n n C13 C18 CLR sing 148 n n C14 C15 CLR sing 149 n n C14 H14 CLR sing 150 n n C15 C16 CLR sing 151 n n C15 H151 CLR sing 152 n n C15 H152 CLR sing 153 n n C16 C17 CLR sing 154 n n C16 H161 CLR sing 155 n n C16 H162 CLR sing 156 n n C17 C20 CLR sing 157 n n C17 H17 CLR sing 158 n n C18 H181 CLR sing 159 n n C18 H182 CLR sing 160 n n C18 H183 CLR sing 161 n n C19 H191 CLR sing 162 n n C19 H192 CLR sing 163 n n C19 H193 CLR sing 164 n n C20 C21 CLR sing 165 n n C20 C22 CLR sing 166 n n C20 H20 CLR sing 167 n n C21 H211 CLR sing 168 n n C21 H212 CLR sing 169 n n C21 H213 CLR sing 170 n n C22 C23 CLR sing 171 n n C22 H221 CLR sing 172 n n C22 H222 CLR sing 173 n n C23 C24 CLR sing 174 n n C23 H231 CLR sing 175 n n C23 H232 CLR sing 176 n n C24 C25 CLR sing 177 n n C24 H241 CLR sing 178 n n C24 H242 CLR sing 179 n n C25 C26 CLR sing 180 n n C25 C27 CLR sing 181 n n C25 H25 CLR sing 182 n n C26 H261 CLR sing 183 n n C26 H262 CLR sing 184 n n C26 H263 CLR sing 185 n n C27 H271 CLR sing 186 n n C27 H272 CLR sing 187 n n C27 H273 CLR sing 188 n n O1 H1 CLR sing 189 n n # _atom_sites.entry_id 7WE4 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NAG A 1 2001 1801 NAG NAG . E 3 NAG A 1 2002 1802 NAG NAG . F 3 NAG A 1 2003 1805 NAG NAG . G 4 95T A 1 2004 1901 95T LIG . H 5 CLR A 1 2005 2001 CLR CLR . I 6 PCW A 1 2006 2003 PCW PCW . J 6 PCW A 1 2007 2004 PCW PCW . K 7 LPE A 1 2008 2005 LPE LPE . L 7 LPE A 1 2009 2006 LPE LPE . M 6 PCW A 1 2010 2007 PCW PCW . N 7 LPE A 1 2011 2008 LPE LPE . O 7 LPE A 1 2012 2009 LPE LPE . P 6 PCW A 1 2013 2010 PCW PCW . Q 6 PCW A 1 2014 2014 PCW PCW . R 7 LPE A 1 2015 2016 LPE LPE . S 5 CLR A 1 2016 2017 CLR CLR . T 7 LPE A 1 2017 2018 LPE LPE . U 7 LPE A 1 2018 2019 LPE LPE . V 7 LPE A 1 2019 2020 LPE LPE . W 7 LPE A 1 2020 2021 LPE LPE . X 5 CLR A 1 2021 2022 CLR CLR . Y 8 P5S A 1 2022 2101 P5S P5S . Z 8 P5S A 1 2023 2102 P5S P5S . AA 8 P5S A 1 2024 2103 P5S P5S . BA 5 CLR A 1 2025 1 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . H 5 111.222 149.909 119.843 1 20 ? C1 CLR 2005 A 1 HETATM 2 C C2 CLR . . . H 5 110.977 150.116 118.357 1 20 ? C2 CLR 2005 A 1 HETATM 3 C C3 CLR . . . H 5 109.572 149.661 117.995 1 20 ? C3 CLR 2005 A 1 HETATM 4 C C4 CLR . . . H 5 108.588 150.577 118.7 1 20 ? C4 CLR 2005 A 1 HETATM 5 C C5 CLR . . . H 5 108.829 150.535 120.183 1 20 ? C5 CLR 2005 A 1 HETATM 6 C C6 CLR . . . H 5 107.756 150.401 120.973 1 20 ? C6 CLR 2005 A 1 HETATM 7 C C7 CLR . . . H 5 107.853 149.968 122.412 1 20 ? C7 CLR 2005 A 1 HETATM 8 C C8 CLR . . . H 5 109.154 150.472 122.982 1 20 ? C8 CLR 2005 A 1 HETATM 9 C C9 CLR . . . H 5 110.322 150.047 122.115 1 20 ? C9 CLR 2005 A 1 HETATM 10 C C10 CLR . . . H 5 110.232 150.656 120.73 1 20 ? C10 CLR 2005 A 1 HETATM 11 C C11 CLR . . . H 5 111.664 150.401 122.76 1 20 ? C11 CLR 2005 A 1 HETATM 12 C C12 CLR . . . H 5 111.785 149.936 124.208 1 20 ? C12 CLR 2005 A 1 HETATM 13 C C13 CLR . . . H 5 110.615 150.449 125.011 1 20 ? C13 CLR 2005 A 1 HETATM 14 C C14 CLR . . . H 5 109.364 149.909 124.369 1 20 ? C14 CLR 2005 A 1 HETATM 15 C C15 CLR . . . H 5 108.275 150.186 125.383 1 20 ? C15 CLR 2005 A 1 HETATM 16 C C16 CLR . . . H 5 108.973 149.836 126.681 1 20 ? C16 CLR 2005 A 1 HETATM 17 C C17 CLR . . . H 5 110.476 149.964 126.443 1 20 ? C17 CLR 2005 A 1 HETATM 18 C C18 CLR . . . H 5 110.635 151.978 124.991 1 20 ? C18 CLR 2005 A 1 HETATM 19 C C19 CLR . . . H 5 110.605 152.134 120.799 1 20 ? C19 CLR 2005 A 1 HETATM 20 C C20 CLR . . . H 5 111.177 150.861 127.465 1 20 ? C20 CLR 2005 A 1 HETATM 21 C C21 CLR . . . H 5 112.485 150.232 127.929 1 20 ? C21 CLR 2005 A 1 HETATM 22 C C22 CLR . . . H 5 110.3 151.201 128.665 1 20 ? C22 CLR 2005 A 1 HETATM 23 C C23 CLR . . . H 5 110.544 150.311 129.873 1 20 ? C23 CLR 2005 A 1 HETATM 24 C C24 CLR . . . H 5 109.217 149.787 130.395 1 20 ? C24 CLR 2005 A 1 HETATM 25 C C25 CLR . . . H 5 109.401 148.821 131.556 1 20 ? C25 CLR 2005 A 1 HETATM 26 C C26 CLR . . . H 5 109.863 149.549 132.816 1 20 ? C26 CLR 2005 A 1 HETATM 27 C C27 CLR . . . H 5 108.122 148.026 131.781 1 20 ? C27 CLR 2005 A 1 HETATM 28 O O1 CLR . . . H 5 109.376 149.756 116.586 1 20 ? O1 CLR 2005 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #