data_7WF4 # _model_server_result.job_id Yknox3twmZJ-NnaKR207NQ _model_server_result.datetime_utc '2024-11-04 22:35:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wf4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":502}' # _entry.id 7WF4 # _exptl.entry_id 7WF4 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WF4 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WF4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Q N N ? 5 R N N ? 5 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 3 J CYS 101 1_555 D SG CYS 25 J CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 F SG CYS 3 N CYS 101 1_555 F SG CYS 25 N CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 G SG CYS 3 O CYS 101 1_555 G SG CYS 25 O CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 H SG CYS 3 P CYS 101 1_555 H SG CYS 25 P CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A O THR 237 D THR 444 1_555 R K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.413 ? metalc ? metalc2 A O THR 237 D THR 444 1_555 S K K . B K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc3 A O VAL 238 D VAL 445 1_555 R K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc4 A O GLY 239 D GLY 446 1_555 Q K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc5 J O THR 237 B THR 444 1_555 R K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.378 ? metalc ? metalc6 J O THR 237 B THR 444 1_555 S K K . B K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc7 J O VAL 238 B VAL 445 1_555 R K K . B K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.952 ? metalc ? metalc8 J O GLY 239 B GLY 446 1_555 Q K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc9 Q K K . B K 501 1_555 K O GLY 239 F GLY 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc10 Q K K . B K 501 1_555 L O GLY 239 H GLY 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc11 R K K . B K 502 1_555 K O THR 237 F THR 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.377 ? metalc ? metalc12 R K K . B K 502 1_555 K O VAL 238 F VAL 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc13 R K K . B K 502 1_555 L O THR 237 H THR 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.374 ? metalc ? metalc14 R K K . B K 502 1_555 L O VAL 238 H VAL 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc15 S K K . B K 503 1_555 K O THR 237 F THR 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc16 S K K . B K 503 1_555 L O THR 237 H THR 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WF4 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 NAP G 1 401 401 NAP NAP . N 4 NAP I 1 401 404 NAP NAP . O 4 NAP M 1 401 403 NAP NAP . P 4 NAP o 1 401 402 NAP NAP . Q 5 K B 1 501 1 K K . R 5 K B 1 502 2 K K . S 5 K B 1 503 3 K K . T 6 HOH D 1 501 4 HOH HOH . T 6 HOH D 2 502 10 HOH HOH . U 6 HOH G 1 501 1 HOH HOH . U 6 HOH G 2 502 1 HOH HOH . U 6 HOH G 3 503 5 HOH HOH . U 6 HOH G 4 504 1 HOH HOH . U 6 HOH G 5 505 1 HOH HOH . U 6 HOH G 6 506 1 HOH HOH . U 6 HOH G 7 507 1 HOH HOH . U 6 HOH G 8 508 4 HOH HOH . U 6 HOH G 9 509 1 HOH HOH . U 6 HOH G 10 510 1 HOH HOH . U 6 HOH G 11 511 1 HOH HOH . U 6 HOH G 12 512 4 HOH HOH . U 6 HOH G 13 513 1 HOH HOH . U 6 HOH G 14 514 1 HOH HOH . U 6 HOH G 15 515 1 HOH HOH . U 6 HOH G 16 516 25 HOH HOH . U 6 HOH G 17 517 1 HOH HOH . U 6 HOH G 18 518 1 HOH HOH . U 6 HOH G 19 519 1 HOH HOH . U 6 HOH G 20 520 1 HOH HOH . U 6 HOH G 21 521 1 HOH HOH . U 6 HOH G 22 522 401 HOH HOH . U 6 HOH G 23 523 1 HOH HOH . V 6 HOH I 1 501 207 HOH HOH . V 6 HOH I 2 502 4 HOH HOH . V 6 HOH I 3 503 8 HOH HOH . V 6 HOH I 4 504 207 HOH HOH . V 6 HOH I 5 505 364 HOH HOH . V 6 HOH I 6 506 207 HOH HOH . V 6 HOH I 7 507 3 HOH HOH . V 6 HOH I 8 508 403 HOH HOH . V 6 HOH I 9 509 403 HOH HOH . V 6 HOH I 10 510 4 HOH HOH . V 6 HOH I 11 511 496 HOH HOH . V 6 HOH I 12 512 403 HOH HOH . V 6 HOH I 13 513 207 HOH HOH . V 6 HOH I 14 514 3 HOH HOH . V 6 HOH I 15 515 364 HOH HOH . V 6 HOH I 16 516 496 HOH HOH . V 6 HOH I 17 517 28 HOH HOH . V 6 HOH I 18 518 496 HOH HOH . V 6 HOH I 19 519 4 HOH HOH . V 6 HOH I 20 520 496 HOH HOH . V 6 HOH I 21 521 364 HOH HOH . V 6 HOH I 22 522 1 HOH HOH . V 6 HOH I 23 523 364 HOH HOH . W 6 HOH M 1 501 205 HOH HOH . W 6 HOH M 2 502 2 HOH HOH . W 6 HOH M 3 503 6 HOH HOH . W 6 HOH M 4 504 205 HOH HOH . W 6 HOH M 5 505 205 HOH HOH . W 6 HOH M 6 506 362 HOH HOH . W 6 HOH M 7 507 1 HOH HOH . W 6 HOH M 8 508 401 HOH HOH . W 6 HOH M 9 509 401 HOH HOH . W 6 HOH M 10 510 2 HOH HOH . W 6 HOH M 11 511 494 HOH HOH . W 6 HOH M 12 512 1 HOH HOH . W 6 HOH M 13 513 205 HOH HOH . W 6 HOH M 14 514 362 HOH HOH . W 6 HOH M 15 515 26 HOH HOH . W 6 HOH M 16 516 401 HOH HOH . W 6 HOH M 17 517 494 HOH HOH . W 6 HOH M 18 518 494 HOH HOH . W 6 HOH M 19 519 2 HOH HOH . W 6 HOH M 20 520 494 HOH HOH . W 6 HOH M 21 521 362 HOH HOH . W 6 HOH M 22 522 402 HOH HOH . W 6 HOH M 23 523 362 HOH HOH . X 6 HOH o 1 501 206 HOH HOH . X 6 HOH o 2 502 7 HOH HOH . X 6 HOH o 3 503 3 HOH HOH . X 6 HOH o 4 504 206 HOH HOH . X 6 HOH o 5 505 363 HOH HOH . X 6 HOH o 6 506 206 HOH HOH . X 6 HOH o 7 507 2 HOH HOH . X 6 HOH o 8 508 402 HOH HOH . X 6 HOH o 9 509 402 HOH HOH . X 6 HOH o 10 510 3 HOH HOH . X 6 HOH o 11 511 402 HOH HOH . X 6 HOH o 12 512 495 HOH HOH . X 6 HOH o 13 513 206 HOH HOH . X 6 HOH o 14 514 2 HOH HOH . X 6 HOH o 15 515 495 HOH HOH . X 6 HOH o 16 516 27 HOH HOH . X 6 HOH o 17 517 363 HOH HOH . X 6 HOH o 18 518 495 HOH HOH . X 6 HOH o 19 519 3 HOH HOH . X 6 HOH o 20 520 495 HOH HOH . X 6 HOH o 21 521 363 HOH HOH . X 6 HOH o 22 522 403 HOH HOH . X 6 HOH o 23 523 363 HOH HOH . Y 6 HOH B 1 601 5 HOH HOH . Y 6 HOH B 2 602 9 HOH HOH . Z 6 HOH F 1 501 1 HOH HOH . Z 6 HOH F 2 502 11 HOH HOH . AA 6 HOH H 1 501 8 HOH HOH . AA 6 HOH H 2 502 12 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id R _atom_site.label_entity_id 5 _atom_site.Cartn_x 180.067 _atom_site.Cartn_y 180.163 _atom_site.Cartn_z 139.63 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #