data_7WGH # _model_server_result.job_id ezwU8PihmI_AYFPuwwHGBA _model_server_result.datetime_utc '2024-10-10 21:24:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wgh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 7WGH # _exptl.entry_id 7WGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.392 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WGH _cell.length_a 208.339 _cell.length_b 208.339 _cell.length_c 208.339 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C15 H28 O6 P2 S' _chem_comp.formula_weight 398.392 _chem_comp.id FPS _chem_comp.mon_nstd_flag . _chem_comp.name 'S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'FARNESYL THIOPYROPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 S1 FPS sing 83 n n C1 C2 FPS sing 84 n n C1 H11 FPS sing 85 n n C1 H12A FPS sing 86 n n S1 PA FPS sing 87 n n C2 C3 FPS doub 88 e n C2 H2 FPS sing 89 n n C3 C4 FPS sing 90 n n C3 C5 FPS sing 91 n n C4 H41 FPS sing 92 n n C4 H42 FPS sing 93 n n C4 H43 FPS sing 94 n n C5 C6 FPS sing 95 n n C5 H51 FPS sing 96 n n C5 H52 FPS sing 97 n n C6 C7 FPS sing 98 n n C6 H61 FPS sing 99 n n C6 H62 FPS sing 100 n n C7 C8 FPS doub 101 e n C7 H7 FPS sing 102 n n C8 C10 FPS sing 103 n n C8 C9 FPS sing 104 n n C10 C11 FPS sing 105 n n C10 H101 FPS sing 106 n n C10 H102 FPS sing 107 n n C9 H91 FPS sing 108 n n C9 H92 FPS sing 109 n n C9 H93 FPS sing 110 n n C11 C12 FPS sing 111 n n C11 H111 FPS sing 112 n n C11 H112 FPS sing 113 n n C12 C13 FPS doub 114 n n C12 H12 FPS sing 115 n n C13 C14 FPS sing 116 n n C13 C15 FPS sing 117 n n C14 H141 FPS sing 118 n n C14 H142 FPS sing 119 n n C14 H143 FPS sing 120 n n C15 H151 FPS sing 121 n n C15 H152 FPS sing 122 n n C15 H153 FPS sing 123 n n PA O1A FPS doub 124 n n PA O2A FPS sing 125 n n PA O3A FPS sing 126 n n O2A H2A FPS sing 127 n n O3A PB FPS sing 128 n n PB O1B FPS sing 129 n n PB O2B FPS doub 130 n n PB O3B FPS sing 131 n n O1B H1B FPS sing 132 n n O3B H3B FPS sing 133 n n # _atom_sites.entry_id 7WGH _atom_sites.fract_transf_matrix[1][1] 0.0048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 POP A 1 501 501 POP POP . C 2 POP A 1 502 502 POP POP . D 3 PO4 A 1 503 503 PO4 PO4 . E 4 FPS A 1 504 504 FPS FPS . F 4 FPS A 1 505 505 FPS FPS . G 5 HOH A 1 601 601 HOH HOH . G 5 HOH A 2 602 602 HOH HOH . G 5 HOH A 3 603 603 HOH HOH . G 5 HOH A 4 604 604 HOH HOH . G 5 HOH A 5 605 605 HOH HOH . G 5 HOH A 6 606 606 HOH HOH . G 5 HOH A 7 607 607 HOH HOH . G 5 HOH A 8 608 608 HOH HOH . G 5 HOH A 9 609 609 HOH HOH . G 5 HOH A 10 610 610 HOH HOH . G 5 HOH A 11 611 611 HOH HOH . G 5 HOH A 12 612 612 HOH HOH . G 5 HOH A 13 613 613 HOH HOH . G 5 HOH A 14 614 615 HOH HOH . G 5 HOH A 15 615 616 HOH HOH . G 5 HOH A 16 616 617 HOH HOH . G 5 HOH A 17 617 618 HOH HOH . G 5 HOH A 18 618 619 HOH HOH . G 5 HOH A 19 619 620 HOH HOH . G 5 HOH A 20 620 621 HOH HOH . G 5 HOH A 21 621 622 HOH HOH . G 5 HOH A 22 622 623 HOH HOH . G 5 HOH A 23 623 624 HOH HOH . G 5 HOH A 24 624 625 HOH HOH . G 5 HOH A 25 625 626 HOH HOH . G 5 HOH A 26 626 614 HOH HOH . G 5 HOH A 27 627 627 HOH HOH . G 5 HOH A 28 628 628 HOH HOH . G 5 HOH A 29 629 629 HOH HOH . G 5 HOH A 30 630 630 HOH HOH . G 5 HOH A 31 631 631 HOH HOH . G 5 HOH A 32 632 632 HOH HOH . G 5 HOH A 33 633 633 HOH HOH . G 5 HOH A 34 634 634 HOH HOH . G 5 HOH A 35 635 635 HOH HOH . G 5 HOH A 36 636 636 HOH HOH . G 5 HOH A 37 637 637 HOH HOH . G 5 HOH A 38 638 638 HOH HOH . G 5 HOH A 39 639 639 HOH HOH . G 5 HOH A 40 640 640 HOH HOH . G 5 HOH A 41 641 641 HOH HOH . G 5 HOH A 42 642 642 HOH HOH . G 5 HOH A 43 643 643 HOH HOH . G 5 HOH A 44 644 644 HOH HOH . G 5 HOH A 45 645 645 HOH HOH . G 5 HOH A 46 646 646 HOH HOH . G 5 HOH A 47 647 647 HOH HOH . G 5 HOH A 48 648 648 HOH HOH . G 5 HOH A 49 649 649 HOH HOH . G 5 HOH A 50 650 650 HOH HOH . G 5 HOH A 51 651 651 HOH HOH . G 5 HOH A 52 652 652 HOH HOH . G 5 HOH A 53 653 653 HOH HOH . G 5 HOH A 54 654 654 HOH HOH . G 5 HOH A 55 655 655 HOH HOH . G 5 HOH A 56 656 656 HOH HOH . G 5 HOH A 57 657 657 HOH HOH . G 5 HOH A 58 658 658 HOH HOH . G 5 HOH A 59 659 659 HOH HOH . G 5 HOH A 60 660 660 HOH HOH . G 5 HOH A 61 661 661 HOH HOH . G 5 HOH A 62 662 662 HOH HOH . G 5 HOH A 63 663 663 HOH HOH . G 5 HOH A 64 664 664 HOH HOH . G 5 HOH A 65 665 665 HOH HOH . G 5 HOH A 66 666 666 HOH HOH . G 5 HOH A 67 667 667 HOH HOH . G 5 HOH A 68 668 668 HOH HOH . G 5 HOH A 69 669 669 HOH HOH . G 5 HOH A 70 670 670 HOH HOH . G 5 HOH A 71 671 671 HOH HOH . G 5 HOH A 72 672 672 HOH HOH . G 5 HOH A 73 673 673 HOH HOH . G 5 HOH A 74 674 674 HOH HOH . G 5 HOH A 75 675 675 HOH HOH . G 5 HOH A 76 676 676 HOH HOH . G 5 HOH A 77 677 677 HOH HOH . G 5 HOH A 78 678 678 HOH HOH . G 5 HOH A 79 679 679 HOH HOH . G 5 HOH A 80 680 680 HOH HOH . G 5 HOH A 81 681 681 HOH HOH . G 5 HOH A 82 682 682 HOH HOH . G 5 HOH A 83 683 683 HOH HOH . G 5 HOH A 84 684 684 HOH HOH . G 5 HOH A 85 685 685 HOH HOH . G 5 HOH A 86 686 686 HOH HOH . G 5 HOH A 87 687 687 HOH HOH . G 5 HOH A 88 688 688 HOH HOH . G 5 HOH A 89 689 689 HOH HOH . G 5 HOH A 90 690 690 HOH HOH . G 5 HOH A 91 691 691 HOH HOH . G 5 HOH A 92 692 692 HOH HOH . G 5 HOH A 93 693 693 HOH HOH . G 5 HOH A 94 694 694 HOH HOH . G 5 HOH A 95 695 695 HOH HOH . G 5 HOH A 96 696 696 HOH HOH . G 5 HOH A 97 697 697 HOH HOH . G 5 HOH A 98 698 698 HOH HOH . G 5 HOH A 99 699 699 HOH HOH . G 5 HOH A 100 700 700 HOH HOH . G 5 HOH A 101 701 701 HOH HOH . G 5 HOH A 102 702 702 HOH HOH . G 5 HOH A 103 703 703 HOH HOH . G 5 HOH A 104 704 704 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 FPS . . . E 4 19.39 47.829 219.121 1 81.41 ? C2 FPS 504 A 1 HETATM 2 C C3 FPS . . . E 4 18.527 47.556 218.128 1 81.24 ? C3 FPS 504 A 1 HETATM 3 C C4 FPS . . . E 4 18.893 46.549 217.079 1 85.77 ? C4 FPS 504 A 1 HETATM 4 C C5 FPS . . . E 4 17.184 48.246 218.086 1 72.46 ? C5 FPS 504 A 1 HETATM 5 C C6 FPS . . . E 4 16.495 48.007 219.427 1 66.57 ? C6 FPS 504 A 1 HETATM 6 C C7 FPS . . . E 4 16.18 46.536 219.481 1 63.82 ? C7 FPS 504 A 1 HETATM 7 C C8 FPS . . . E 4 16.417 45.715 220.518 1 63.64 ? C8 FPS 504 A 1 HETATM 8 C C10 FPS . . . E 4 17.033 46.127 221.849 1 63.86 ? C10 FPS 504 A 1 HETATM 9 C C9 FPS . . . E 4 16.014 44.293 220.32 1 62.31 ? C9 FPS 504 A 1 HETATM 10 C C11 FPS . . . E 4 15.983 45.94 222.946 1 58.38 ? C11 FPS 504 A 1 HETATM 11 C C12 FPS . . . E 4 16.548 45.456 224.269 1 58.25 ? C12 FPS 504 A 1 HETATM 12 C C13 FPS . . . E 4 15.729 45.347 225.34 1 55.97 ? C13 FPS 504 A 1 HETATM 13 C C14 FPS . . . E 4 14.28 45.698 225.223 1 51.04 ? C14 FPS 504 A 1 HETATM 14 C C15 FPS . . . E 4 16.223 44.866 226.672 1 53.8 ? C15 FPS 504 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #