data_7WGQ # _model_server_result.job_id fxROw2HAmoJKvGS3aQec1g _model_server_result.datetime_utc '2024-11-22 05:14:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wgq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7WGQ # _exptl.entry_id 7WGQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 490.548 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WGQ _cell.length_a 49.422 _cell.length_b 63.32 _cell.length_c 123.517 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H30 N2 O6' _chem_comp.formula_weight 490.548 _chem_comp.id P7F _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C36 O06 P7F sing 237 n n O06 C35 P7F sing 238 n n C35 C33 P7F doub 239 n y C35 C34 P7F sing 240 n y C33 C31 P7F sing 241 n y C34 C32 P7F doub 242 n y C31 C26 P7F doub 243 n y C32 C26 P7F sing 244 n y C26 O02 P7F sing 245 n n O02 C14 P7F sing 246 n n C14 C11 P7F sing 247 n n C11 C09 P7F sing 248 n n C09 N07 P7F sing 249 n n C29 C23 P7F sing 250 n n N08 C13 P7F doub 251 n y N08 C19 P7F sing 252 n y C21 C22 P7F doub 253 n y C21 C16 P7F sing 254 n y N07 C13 P7F sing 255 n n N07 C10 P7F sing 256 n n C22 C17 P7F sing 257 n y C16 C12 P7F doub 258 n y C25 C19 P7F doub 259 n y C25 C28 P7F sing 260 n y C13 O01 P7F sing 261 n y C19 C18 P7F sing 262 n y C17 O03 P7F sing 263 n n C17 C15 P7F doub 264 n y C23 C20 P7F sing 265 n n C12 C15 P7F sing 266 n y C12 C10 P7F sing 267 n n O03 C20 P7F sing 268 n n C20 C30 P7F sing 269 n n C28 C27 P7F doub 270 n y O01 C18 P7F sing 271 n y C18 C24 P7F doub 272 n y C30 O05 P7F doub 273 n n C30 O04 P7F sing 274 n n C27 C24 P7F sing 275 n y C09 H091 P7F sing 276 n n C09 H092 P7F sing 277 n n C10 H102 P7F sing 278 n n C10 H101 P7F sing 279 n n C11 H112 P7F sing 280 n n C11 H111 P7F sing 281 n n C14 H141 P7F sing 282 n n C14 H142 P7F sing 283 n n C15 H151 P7F sing 284 n n C16 H161 P7F sing 285 n n C20 H201 P7F sing 286 n n C21 H211 P7F sing 287 n n C22 H221 P7F sing 288 n n C23 H232 P7F sing 289 n n C23 H231 P7F sing 290 n n C24 H241 P7F sing 291 n n C25 H251 P7F sing 292 n n C27 H271 P7F sing 293 n n C28 H281 P7F sing 294 n n C29 H292 P7F sing 295 n n C29 H291 P7F sing 296 n n C29 H293 P7F sing 297 n n C31 H311 P7F sing 298 n n C32 H321 P7F sing 299 n n C33 H331 P7F sing 300 n n C34 H341 P7F sing 301 n n C36 H363 P7F sing 302 n n C36 H362 P7F sing 303 n n C36 H361 P7F sing 304 n n O04 H1 P7F sing 305 n n # _atom_sites.entry_id 7WGQ _atom_sites.fract_transf_matrix[1][1] 0.020234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 P7F A 1 501 1 P7F P7F . D 4 HOH A 1 601 5 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C09 P7F . . . C 3 1.735 3.263 -13.889 1 64 ? C09 P7F 501 A 1 HETATM 2 C C10 P7F . . . C 3 0.239 4.023 -12.019 1 65.49 ? C10 P7F 501 A 1 HETATM 3 C C11 P7F . . . C 3 3.17 3.651 -13.539 1 64.82 ? C11 P7F 501 A 1 HETATM 4 C C12 P7F . . . C 3 -1.038 3.202 -12.149 1 66.04 ? C12 P7F 501 A 1 HETATM 5 C C13 P7F . . . C 3 0.736 5.598 -13.873 1 64.82 ? C13 P7F 501 A 1 HETATM 6 C C14 P7F . . . C 3 3.985 2.446 -13.07 1 68.98 ? C14 P7F 501 A 1 HETATM 7 C C15 P7F . . . C 3 -1.593 2.607 -10.872 1 67.05 ? C15 P7F 501 A 1 HETATM 8 C C16 P7F . . . C 3 -1.749 2.971 -13.48 1 63.68 ? C16 P7F 501 A 1 HETATM 9 C C17 P7F . . . C 3 -2.864 1.781 -10.876 1 65.64 ? C17 P7F 501 A 1 HETATM 10 C C18 P7F . . . C 3 0.08 7.667 -14.128 1 56.83 ? C18 P7F 501 A 1 HETATM 11 C C19 P7F . . . C 3 0.934 7.341 -15.173 1 52.93 ? C19 P7F 501 A 1 HETATM 12 C C20 P7F . . . C 3 -3.223 2.011 -8.506 1 65.18 ? C20 P7F 501 A 1 HETATM 13 C C21 P7F . . . C 3 -3.034 2.129 -13.507 1 75.95 ? C21 P7F 501 A 1 HETATM 14 C C22 P7F . . . C 3 -3.589 1.536 -12.199 1 75.01 ? C22 P7F 501 A 1 HETATM 15 C C23 P7F . . . C 3 -2.916 1.071 -7.343 1 72.06 ? C23 P7F 501 A 1 HETATM 16 C C24 P7F . . . C 3 -0.564 9.091 -14.036 1 51 ? C24 P7F 501 A 1 HETATM 17 C C25 P7F . . . C 3 1.26 8.404 -16.275 1 56.78 ? C25 P7F 501 A 1 HETATM 18 C C26 P7F . . . C 3 6.188 1.945 -12.306 1 65.42 ? C26 P7F 501 A 1 HETATM 19 C C27 P7F . . . C 3 -0.259 10.12 -15.083 1 57.14 ? C27 P7F 501 A 1 HETATM 20 C C28 P7F . . . C 3 0.65 9.776 -16.2 1 65.57 ? C28 P7F 501 A 1 HETATM 21 C C29 P7F . . . C 3 -1.518 0.492 -7.55 1 69.32 ? C29 P7F 501 A 1 HETATM 22 C C30 P7F . . . C 3 -4.521 2.762 -8.236 1 63.74 ? C30 P7F 501 A 1 HETATM 23 C C31 P7F . . . C 3 7.122 2.367 -11.174 1 72.2 ? C31 P7F 501 A 1 HETATM 24 C C32 P7F . . . C 3 6.234 0.515 -12.84 1 67.24 ? C32 P7F 501 A 1 HETATM 25 C C33 P7F . . . C 3 8.099 1.357 -10.57 1 73.47 ? C33 P7F 501 A 1 HETATM 26 C C34 P7F . . . C 3 7.209 -0.495 -12.236 1 65.38 ? C34 P7F 501 A 1 HETATM 27 C C35 P7F . . . C 3 8.144 -0.075 -11.103 1 73.3 ? C35 P7F 501 A 1 HETATM 28 C C36 P7F . . . C 3 9.923 -1.582 -11.464 1 67.96 ? C36 P7F 501 A 1 HETATM 29 N N07 P7F . . . C 3 0.888 4.28 -13.287 1 62.47 ? N07 P7F 501 A 1 HETATM 30 N N08 P7F . . . C 3 1.332 6.073 -15.003 1 61.25 ? N08 P7F 501 A 1 HETATM 31 O O01 P7F . . . C 3 -0.029 6.6 -13.34 1 63.88 ? O01 P7F 501 A 1 HETATM 32 O O02 P7F . . . C 3 5.301 2.879 -12.858 1 74.05 ? O02 P7F 501 A 1 HETATM 33 O O03 P7F . . . C 3 -3.355 1.241 -9.675 1 74.65 ? O03 P7F 501 A 1 HETATM 34 O O04 P7F . . . C 3 -5.622 2.153 -8.192 1 70.41 -1 O04 P7F 501 A 1 HETATM 35 O O05 P7F . . . C 3 -4.492 4.006 -8.046 1 65.27 ? O05 P7F 501 A 1 HETATM 36 O O06 P7F . . . C 3 9.037 -1 -10.547 1 82.99 ? O06 P7F 501 A 1 HETATM 37 H H091 P7F . . . C 3 1.525 2.391 -13.519 1 76.8 ? H091 P7F 501 A 1 HETATM 38 H H092 P7F . . . C 3 1.616 3.257 -14.852 1 76.8 ? H092 P7F 501 A 1 HETATM 39 H H102 P7F . . . C 3 0.021 4.873 -11.605 1 78.59 ? H102 P7F 501 A 1 HETATM 40 H H101 P7F . . . C 3 0.858 3.547 -11.444 1 78.59 ? H101 P7F 501 A 1 HETATM 41 H H112 P7F . . . C 3 3.594 4.034 -14.323 1 77.78 ? H112 P7F 501 A 1 HETATM 42 H H111 P7F . . . C 3 3.154 4.316 -12.832 1 77.78 ? H111 P7F 501 A 1 HETATM 43 H H141 P7F . . . C 3 3.616 2.095 -12.244 1 82.78 ? H141 P7F 501 A 1 HETATM 44 H H142 P7F . . . C 3 3.973 1.757 -13.753 1 82.78 ? H142 P7F 501 A 1 HETATM 45 H H151 P7F . . . C 3 -1.151 2.76 -10.068 1 80.45 ? H151 P7F 501 A 1 HETATM 46 H H161 P7F . . . C 3 -1.408 3.334 -14.265 1 76.42 ? H161 P7F 501 A 1 HETATM 47 H H201 P7F . . . C 3 -2.496 2.644 -8.613 1 78.22 ? H201 P7F 501 A 1 HETATM 48 H H211 P7F . . . C 3 -3.478 1.981 -14.311 1 91.14 ? H211 P7F 501 A 1 HETATM 49 H H221 P7F . . . C 3 -4.366 1.026 -12.215 1 90.01 ? H221 P7F 501 A 1 HETATM 50 H H232 P7F . . . C 3 -2.946 1.563 -6.507 1 86.47 ? H232 P7F 501 A 1 HETATM 51 H H231 P7F . . . C 3 -3.568 0.352 -7.322 1 86.47 ? H231 P7F 501 A 1 HETATM 52 H H241 P7F . . . C 3 -1.134 9.299 -13.331 1 61.2 ? H241 P7F 501 A 1 HETATM 53 H H251 P7F . . . C 3 1.832 8.187 -16.975 1 68.13 ? H251 P7F 501 A 1 HETATM 54 H H271 P7F . . . C 3 -0.64 10.967 -15.033 1 68.57 ? H271 P7F 501 A 1 HETATM 55 H H281 P7F . . . C 3 0.843 10.408 -16.854 1 78.68 ? H281 P7F 501 A 1 HETATM 56 H H292 P7F . . . C 3 -0.855 1.133 -7.247 1 83.19 ? H292 P7F 501 A 1 HETATM 57 H H291 P7F . . . C 3 -1.382 0.307 -8.492 1 83.19 ? H291 P7F 501 A 1 HETATM 58 H H293 P7F . . . C 3 -1.43 -0.329 -7.042 1 83.19 ? H293 P7F 501 A 1 HETATM 59 H H311 P7F . . . C 3 7.097 3.238 -10.85 1 86.64 ? H311 P7F 501 A 1 HETATM 60 H H321 P7F . . . C 3 5.666 0.258 -13.53 1 80.69 ? H321 P7F 501 A 1 HETATM 61 H H331 P7F . . . C 3 8.666 1.615 -9.88 1 88.16 ? H331 P7F 501 A 1 HETATM 62 H H341 P7F . . . C 3 7.235 -1.366 -12.56 1 78.46 ? H341 P7F 501 A 1 HETATM 63 H H363 P7F . . . C 3 9.761 -2.538 -11.508 1 81.56 ? H363 P7F 501 A 1 HETATM 64 H H362 P7F . . . C 3 9.785 -1.191 -12.341 1 81.56 ? H362 P7F 501 A 1 HETATM 65 H H361 P7F . . . C 3 10.836 -1.422 -11.178 1 81.56 ? H361 P7F 501 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 65 #