data_7WGT # _model_server_result.job_id gqbg1mb6R2-gFv4Zm2bi7w _model_server_result.datetime_utc '2024-11-25 04:41:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 7WGT # _exptl.entry_id 7WGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 350.411 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-(2-{[(diphenylmethylidene)amino]oxy}ethyl)-1,2,5,6-tetrahydropyridine-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WGT _cell.length_a 98.007 _cell.length_b 135.025 _cell.length_c 162.559 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc9 A OD2 ASP 355 A ASP 420 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? metalc ? metalc10 A OG SER 356 A SER 421 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc11 D O08 9BC . A 9BC 701 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? # _chem_comp.formula 'C21 H22 N2 O3' _chem_comp.formula_weight 350.411 _chem_comp.id 9BC _chem_comp.mon_nstd_flag . _chem_comp.name '1-(2-{[(diphenylmethylidene)amino]oxy}ethyl)-1,2,5,6-tetrahydropyridine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NO-711 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O9 C7 9BC doub 1 n n C10 C11 9BC sing 2 n n C10 N3 9BC sing 3 n n C11 O12 9BC sing 4 n n C17 C18 9BC doub 5 n y C17 C16 9BC sing 6 n y C18 C19 9BC sing 7 n y O12 N13 9BC sing 8 n n C4 N3 9BC sing 9 n n C4 C5 9BC sing 10 n n C7 C5 9BC sing 11 n n C7 O08 9BC sing 12 n n C16 C15 9BC doub 13 n y N3 C2 9BC sing 14 n n C19 C20 9BC doub 15 n y C5 C6 9BC doub 16 n n C15 C20 9BC sing 17 n y C15 C14 9BC sing 18 n n C2 C1 9BC sing 19 n n N13 C14 9BC doub 20 n n C14 C21 9BC sing 21 n n C6 C1 9BC sing 22 n n C21 C22 9BC doub 23 n y C21 C26 9BC sing 24 n y C22 C23 9BC sing 25 n y C26 C25 9BC doub 26 n y C23 C24 9BC doub 27 n y C25 C24 9BC sing 28 n y C1 H1 9BC sing 29 n n C1 H2 9BC sing 30 n n C2 H3 9BC sing 31 n n C2 H4 9BC sing 32 n n C4 H5 9BC sing 33 n n C4 H6 9BC sing 34 n n C6 H8 9BC sing 35 n n C10 H10 9BC sing 36 n n C10 H11 9BC sing 37 n n C11 H12 9BC sing 38 n n C11 H13 9BC sing 39 n n C16 H14 9BC sing 40 n n C17 H15 9BC sing 41 n n C18 H16 9BC sing 42 n n C19 H17 9BC sing 43 n n C20 H18 9BC sing 44 n n C22 H19 9BC sing 45 n n C23 H20 9BC sing 46 n n C24 H21 9BC sing 47 n n C25 H22 9BC sing 48 n n C26 H23 9BC sing 49 n n O08 H25 9BC sing 50 n n # _atom_sites.entry_id 7WGT _atom_sites.fract_transf_matrix[1][1] 0.010203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 9BC A 1 701 1 9BC NNO . E 5 CLR A 1 702 1 CLR CLR . F 6 NA A 1 703 1 NA NA . G 6 NA A 1 704 2 NA NA . H 7 CL A 1 705 3 CL CL . I 8 Y01 A 1 706 1 Y01 Y01 . J 9 HOH A 1 801 3 HOH HOH . J 9 HOH A 2 802 2 HOH HOH . J 9 HOH A 3 803 17 HOH HOH . J 9 HOH A 4 804 16 HOH HOH . J 9 HOH A 5 805 7 HOH HOH . J 9 HOH A 6 806 14 HOH HOH . J 9 HOH A 7 807 13 HOH HOH . J 9 HOH A 8 808 9 HOH HOH . J 9 HOH A 9 809 1 HOH HOH . J 9 HOH A 10 810 10 HOH HOH . J 9 HOH A 11 811 4 HOH HOH . J 9 HOH A 12 812 15 HOH HOH . J 9 HOH A 13 813 11 HOH HOH . J 9 HOH A 14 814 12 HOH HOH . J 9 HOH A 15 815 5 HOH HOH . K 9 HOH L 1 301 21 HOH HOH . K 9 HOH L 2 302 24 HOH HOH . K 9 HOH L 3 303 18 HOH HOH . K 9 HOH L 4 304 20 HOH HOH . K 9 HOH L 5 305 23 HOH HOH . K 9 HOH L 6 306 22 HOH HOH . K 9 HOH L 7 307 25 HOH HOH . L 9 HOH H 1 301 26 HOH HOH . L 9 HOH H 2 302 29 HOH HOH . L 9 HOH H 3 303 28 HOH HOH . L 9 HOH H 4 304 19 HOH HOH . L 9 HOH H 5 305 27 HOH HOH . L 9 HOH H 6 306 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9BC . . . D 4 -5.845 -2.815 28.8 0.83 89.59 ? C1 9BC 701 A 1 HETATM 2 C C2 9BC . . . D 4 -6.632 -3.343 27.458 0.83 91.49 ? C2 9BC 701 A 1 HETATM 3 C C4 9BC . . . D 4 -5.843 -1.342 26.285 0.83 102.03 ? C4 9BC 701 A 1 HETATM 4 C C5 9BC . . . D 4 -4.676 -1.335 27.133 0.83 93.31 ? C5 9BC 701 A 1 HETATM 5 C C6 9BC . . . D 4 -4.66 -2.159 28.447 0.83 87.42 ? C6 9BC 701 A 1 HETATM 6 C C7 9BC . . . D 4 -3.343 -1.01 26.485 0.83 90.72 ? C7 9BC 701 A 1 HETATM 7 C C10 9BC . . . D 4 -7.661 -2.842 25.503 0.83 101.04 ? C10 9BC 701 A 1 HETATM 8 C C11 9BC . . . D 4 -9.162 -2.544 25.536 0.83 103.05 ? C11 9BC 701 A 1 HETATM 9 C C14 9BC . . . D 4 -10.048 -0.224 28.134 0.83 100.51 ? C14 9BC 701 A 1 HETATM 10 C C15 9BC . . . D 4 -10.261 1.123 27.398 0.83 104.14 ? C15 9BC 701 A 1 HETATM 11 C C16 9BC . . . D 4 -9.32 1.641 26.515 0.83 101.47 ? C16 9BC 701 A 1 HETATM 12 C C17 9BC . . . D 4 -9.55 2.844 25.868 0.83 106.6 ? C17 9BC 701 A 1 HETATM 13 C C18 9BC . . . D 4 -10.72 3.553 26.099 0.83 107.58 ? C18 9BC 701 A 1 HETATM 14 C C19 9BC . . . D 4 -11.666 3.051 26.978 0.83 102.21 ? C19 9BC 701 A 1 HETATM 15 C C20 9BC . . . D 4 -11.434 1.842 27.619 0.83 104.33 ? C20 9BC 701 A 1 HETATM 16 C C21 9BC . . . D 4 -10.341 -0.255 29.644 0.83 93.85 ? C21 9BC 701 A 1 HETATM 17 C C22 9BC . . . D 4 -11.032 -1.303 30.239 0.83 94.7 ? C22 9BC 701 A 1 HETATM 18 C C23 9BC . . . D 4 -11.304 -1.278 31.61 0.83 93.47 ? C23 9BC 701 A 1 HETATM 19 C C24 9BC . . . D 4 -10.878 -0.213 32.392 0.83 86.98 ? C24 9BC 701 A 1 HETATM 20 C C25 9BC . . . D 4 -10.194 0.832 31.796 0.83 86.2 ? C25 9BC 701 A 1 HETATM 21 C C26 9BC . . . D 4 -9.939 0.809 30.434 0.83 88.63 ? C26 9BC 701 A 1 HETATM 22 N N3 9BC . . . D 4 -7.027 -2.34 26.715 0.83 99.22 ? N3 9BC 701 A 1 HETATM 23 N N13 9BC . . . D 4 -9.675 -1.273 27.514 0.83 108.49 ? N13 9BC 701 A 1 HETATM 24 O O08 9BC . . . D 4 -2.436 -0.516 27.208 0.83 89.89 ? O08 9BC 701 A 1 HETATM 25 O O9 9BC . . . D 4 -3.167 -1.251 25.252 0.83 89 -1 O9 9BC 701 A 1 HETATM 26 O O12 9BC . . . D 4 -9.392 -1.271 26.108 0.83 114.38 ? O12 9BC 701 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #