data_7WGT # _model_server_result.job_id zZIwC2ZrCVFwp6_T9oSrig _model_server_result.datetime_utc '2024-11-28 21:09:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":703}' # _entry.id 7WGT # _exptl.entry_id 7WGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WGT _cell.length_a 98.007 _cell.length_b 135.025 _cell.length_c 162.559 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc9 A OD2 ASP 355 A ASP 420 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? metalc ? metalc10 A OG SER 356 A SER 421 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc11 D O08 9BC . A 9BC 701 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WGT _atom_sites.fract_transf_matrix[1][1] 0.010203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 9BC A 1 701 1 9BC NNO . E 5 CLR A 1 702 1 CLR CLR . F 6 NA A 1 703 1 NA NA . G 6 NA A 1 704 2 NA NA . H 7 CL A 1 705 3 CL CL . I 8 Y01 A 1 706 1 Y01 Y01 . J 9 HOH A 1 801 3 HOH HOH . J 9 HOH A 2 802 2 HOH HOH . J 9 HOH A 3 803 17 HOH HOH . J 9 HOH A 4 804 16 HOH HOH . J 9 HOH A 5 805 7 HOH HOH . J 9 HOH A 6 806 14 HOH HOH . J 9 HOH A 7 807 13 HOH HOH . J 9 HOH A 8 808 9 HOH HOH . J 9 HOH A 9 809 1 HOH HOH . J 9 HOH A 10 810 10 HOH HOH . J 9 HOH A 11 811 4 HOH HOH . J 9 HOH A 12 812 15 HOH HOH . J 9 HOH A 13 813 11 HOH HOH . J 9 HOH A 14 814 12 HOH HOH . J 9 HOH A 15 815 5 HOH HOH . K 9 HOH L 1 301 21 HOH HOH . K 9 HOH L 2 302 24 HOH HOH . K 9 HOH L 3 303 18 HOH HOH . K 9 HOH L 4 304 20 HOH HOH . K 9 HOH L 5 305 23 HOH HOH . K 9 HOH L 6 306 22 HOH HOH . K 9 HOH L 7 307 25 HOH HOH . L 9 HOH H 1 301 26 HOH HOH . L 9 HOH H 2 302 29 HOH HOH . L 9 HOH H 3 303 28 HOH HOH . L 9 HOH H 4 304 19 HOH HOH . L 9 HOH H 5 305 27 HOH HOH . L 9 HOH H 6 306 30 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x -1.324 _atom_site.Cartn_y -1.529 _atom_site.Cartn_z 29.939 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 88.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #