data_7WGT # _model_server_result.job_id Kwpby4IveCRIUUvcqwdKjQ _model_server_result.datetime_utc '2024-11-25 04:48:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":706}' # _entry.id 7WGT # _exptl.entry_id 7WGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 486.726 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WGT _cell.length_a 98.007 _cell.length_b 135.025 _cell.length_c 162.559 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 124 A CYS 148 1_555 A SG CYS 133 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 23 L CYS 23 1_555 B SG CYS 89 L CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 B SG CYS 135 L CYS 135 1_555 B SG CYS 195 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A O GLY 18 A GLY 42 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A O ALA 20 A ALA 44 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc3 A O VAL 21 A VAL 45 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? metalc ? metalc4 A OD1 ASN 25 A ASN 49 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc5 A O SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc6 A OG SER 255 A SER 320 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc7 A OD1 ASN 287 A ASN 352 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? metalc ? metalc8 A O LEU 352 A LEU 417 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc9 A OD2 ASP 355 A ASP 420 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.039 ? metalc ? metalc10 A OG SER 356 A SER 421 1_555 G NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc11 D O08 9BC . A 9BC 701 1_555 F NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 503 n n CBA CAB Y01 sing 504 n n CBA CAN Y01 sing 505 n n CAN CAJ Y01 sing 506 n n CAJ CAO Y01 sing 507 n n CAO CBB Y01 sing 508 n n CBB CAC Y01 sing 509 n n CBB CBE Y01 sing 510 n n CBE CAP Y01 sing 511 n n CBE CBI Y01 sing 512 n n CAP CAQ Y01 sing 513 n n CAQ CBG Y01 sing 514 n n CBG CBI Y01 sing 515 n n CBG CBD Y01 sing 516 n n CBI CAE Y01 sing 517 n n CBI CAU Y01 sing 518 n n CAU CAS Y01 sing 519 n n CAS CBF Y01 sing 520 n n CBF CBD Y01 sing 521 n n CBF CBH Y01 sing 522 n n CBD CAK Y01 sing 523 n n CAK CAI Y01 sing 524 n n CAI CAZ Y01 doub 525 n n CAZ CAV Y01 sing 526 n n CAZ CBH Y01 sing 527 n n CAV CBC Y01 sing 528 n n CBH CAD Y01 sing 529 n n CBH CAT Y01 sing 530 n n CAT CAR Y01 sing 531 n n CAR CBC Y01 sing 532 n n CBC OAW Y01 sing 533 n n OAW CAY Y01 sing 534 n n CAY OAG Y01 doub 535 n n CAY CAM Y01 sing 536 n n CAM CAL Y01 sing 537 n n CAL CAX Y01 sing 538 n n CAX OAH Y01 sing 539 n n CAX OAF Y01 doub 540 n n CAA HAA1 Y01 sing 541 n n CAA HAA2 Y01 sing 542 n n CAA HAA3 Y01 sing 543 n n CBA HBA Y01 sing 544 n n CAB HAB1 Y01 sing 545 n n CAB HAB2 Y01 sing 546 n n CAB HAB3 Y01 sing 547 n n CAN HAN1 Y01 sing 548 n n CAN HAN2 Y01 sing 549 n n CAJ HAJ1 Y01 sing 550 n n CAJ HAJ2 Y01 sing 551 n n CAO HAO1 Y01 sing 552 n n CAO HAO2 Y01 sing 553 n n CBB HBB Y01 sing 554 n n CAC HAC1 Y01 sing 555 n n CAC HAC2 Y01 sing 556 n n CAC HAC3 Y01 sing 557 n n CBE HBE Y01 sing 558 n n CAP HAP1 Y01 sing 559 n n CAP HAP2 Y01 sing 560 n n CAQ HAQ1 Y01 sing 561 n n CAQ HAQ2 Y01 sing 562 n n CBG HBG Y01 sing 563 n n CBD HBD Y01 sing 564 n n CAE HAE1 Y01 sing 565 n n CAE HAE2 Y01 sing 566 n n CAE HAE3 Y01 sing 567 n n CAU HAU1 Y01 sing 568 n n CAU HAU2 Y01 sing 569 n n CAS HAS1 Y01 sing 570 n n CAS HAS2 Y01 sing 571 n n CBF HBF Y01 sing 572 n n CAK HAK1 Y01 sing 573 n n CAK HAK2 Y01 sing 574 n n CAI HAI Y01 sing 575 n n CAV HAV1 Y01 sing 576 n n CAV HAV2 Y01 sing 577 n n CBC HBC Y01 sing 578 n n CAD HAD1 Y01 sing 579 n n CAD HAD2 Y01 sing 580 n n CAD HAD3 Y01 sing 581 n n CAT HAT1 Y01 sing 582 n n CAT HAT2 Y01 sing 583 n n CAR HAR1 Y01 sing 584 n n CAR HAR2 Y01 sing 585 n n CAM HAM1 Y01 sing 586 n n CAM HAM2 Y01 sing 587 n n CAL HAL1 Y01 sing 588 n n CAL HAL2 Y01 sing 589 n n OAH HAH Y01 sing 590 n n # _atom_sites.entry_id 7WGT _atom_sites.fract_transf_matrix[1][1] 0.010203 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 9BC A 1 701 1 9BC NNO . E 5 CLR A 1 702 1 CLR CLR . F 6 NA A 1 703 1 NA NA . G 6 NA A 1 704 2 NA NA . H 7 CL A 1 705 3 CL CL . I 8 Y01 A 1 706 1 Y01 Y01 . J 9 HOH A 1 801 3 HOH HOH . J 9 HOH A 2 802 2 HOH HOH . J 9 HOH A 3 803 17 HOH HOH . J 9 HOH A 4 804 16 HOH HOH . J 9 HOH A 5 805 7 HOH HOH . J 9 HOH A 6 806 14 HOH HOH . J 9 HOH A 7 807 13 HOH HOH . J 9 HOH A 8 808 9 HOH HOH . J 9 HOH A 9 809 1 HOH HOH . J 9 HOH A 10 810 10 HOH HOH . J 9 HOH A 11 811 4 HOH HOH . J 9 HOH A 12 812 15 HOH HOH . J 9 HOH A 13 813 11 HOH HOH . J 9 HOH A 14 814 12 HOH HOH . J 9 HOH A 15 815 5 HOH HOH . K 9 HOH L 1 301 21 HOH HOH . K 9 HOH L 2 302 24 HOH HOH . K 9 HOH L 3 303 18 HOH HOH . K 9 HOH L 4 304 20 HOH HOH . K 9 HOH L 5 305 23 HOH HOH . K 9 HOH L 6 306 22 HOH HOH . K 9 HOH L 7 307 25 HOH HOH . L 9 HOH H 1 301 26 HOH HOH . L 9 HOH H 2 302 29 HOH HOH . L 9 HOH H 3 303 28 HOH HOH . L 9 HOH H 4 304 19 HOH HOH . L 9 HOH H 5 305 27 HOH HOH . L 9 HOH H 6 306 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . I 8 8.969 1.352 38.406 1 90.28 ? CAA Y01 706 A 1 HETATM 2 C CBA Y01 . . . I 8 7.523 0.915 38.151 1 100.61 ? CBA Y01 706 A 1 HETATM 3 C CAB Y01 . . . I 8 7.49 -0.599 37.851 1 96.31 ? CAB Y01 706 A 1 HETATM 4 C CAN Y01 . . . I 8 6.62 1.273 39.396 1 100.77 ? CAN Y01 706 A 1 HETATM 5 C CAJ Y01 . . . I 8 6.364 0.024 40.266 1 103.94 ? CAJ Y01 706 A 1 HETATM 6 C CAO Y01 . . . I 8 5.435 0.371 41.466 1 100.77 ? CAO Y01 706 A 1 HETATM 7 C CBB Y01 . . . I 8 4.849 -0.909 42.126 1 103.12 ? CBB Y01 706 A 1 HETATM 8 C CAC Y01 . . . I 8 5.586 -2.142 41.64 1 106.48 ? CAC Y01 706 A 1 HETATM 9 C CBE Y01 . . . I 8 4.974 -0.844 43.664 1 105.82 ? CBE Y01 706 A 1 HETATM 10 C CAP Y01 . . . I 8 5.314 0.632 44.178 1 101.86 ? CAP Y01 706 A 1 HETATM 11 C CAQ Y01 . . . I 8 4.497 0.81 45.563 1 108.09 ? CAQ Y01 706 A 1 HETATM 12 C CBG Y01 . . . I 8 4.02 -0.684 45.785 1 112.32 ? CBG Y01 706 A 1 HETATM 13 C CBI Y01 . . . I 8 3.738 -1.196 44.354 1 111.42 ? CBI Y01 706 A 1 HETATM 14 C CAE Y01 . . . I 8 2.567 -0.421 43.756 1 107.24 ? CAE Y01 706 A 1 HETATM 15 C CAU Y01 . . . I 8 3.38 -2.803 44.435 1 109.04 ? CAU Y01 706 A 1 HETATM 16 C CAS Y01 . . . I 8 2.264 -2.981 45.622 1 104.41 ? CAS Y01 706 A 1 HETATM 17 C CBF Y01 . . . I 8 2.665 -2.401 46.791 1 108.18 ? CBF Y01 706 A 1 HETATM 18 C CBD Y01 . . . I 8 2.895 -0.831 46.578 1 112.95 ? CBD Y01 706 A 1 HETATM 19 C CAK Y01 . . . I 8 3.184 -0.201 48.081 1 115.43 ? CAK Y01 706 A 1 HETATM 20 C CAI Y01 . . . I 8 2.484 -0.813 49.021 1 118.98 ? CAI Y01 706 A 1 HETATM 21 C CAZ Y01 . . . I 8 1.811 -1.753 49.031 1 116.37 ? CAZ Y01 706 A 1 HETATM 22 C CAV Y01 . . . I 8 1.171 -2.057 50.558 1 112.04 ? CAV Y01 706 A 1 HETATM 23 C CBH Y01 . . . I 8 1.523 -2.521 47.98 1 109.76 ? CBH Y01 706 A 1 HETATM 24 C CAD Y01 . . . I 8 0.134 -2.1 47.401 1 110.93 ? CAD Y01 706 A 1 HETATM 25 C CAT Y01 . . . I 8 1.463 -3.991 48.427 1 107.69 ? CAT Y01 706 A 1 HETATM 26 C CAR Y01 . . . I 8 0.396 -4.185 49.412 1 107.89 ? CAR Y01 706 A 1 HETATM 27 C CBC Y01 . . . I 8 0.813 -3.631 50.719 1 109.81 ? CBC Y01 706 A 1 HETATM 28 O OAW Y01 . . . I 8 -0.223 -3.73 51.618 1 113.58 ? OAW Y01 706 A 1 HETATM 29 C CAY Y01 . . . I 8 -0.269 -4.923 52.387 1 116.75 ? CAY Y01 706 A 1 HETATM 30 O OAG Y01 . . . I 8 0.601 -5.169 53.159 1 117.62 ? OAG Y01 706 A 1 HETATM 31 C CAM Y01 . . . I 8 -1.456 -5.886 52.233 1 115.06 ? CAM Y01 706 A 1 HETATM 32 C CAL Y01 . . . I 8 -1.07 -7.306 52.723 1 118.5 ? CAL Y01 706 A 1 HETATM 33 C CAX Y01 . . . I 8 -2.309 -7.974 53.406 1 118.97 ? CAX Y01 706 A 1 HETATM 34 O OAH Y01 . . . I 8 -2.872 -8.972 52.878 1 111.1 -1 OAH Y01 706 A 1 HETATM 35 O OAF Y01 . . . I 8 -2.754 -7.5 54.518 1 116.78 ? OAF Y01 706 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #