data_7WI9 # _model_server_result.job_id H9gfczdTu5WHOYuc9wAHPA _model_server_result.datetime_utc '2025-01-10 16:19:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wi9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 7WI9 # _exptl.entry_id 7WI9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6S)-5,6,7,8-TETRAHYDROFOLATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7WI9 _cell.length_a 66.647 _cell.length_b 66.647 _cell.length_c 92.48 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WI9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' GTP 1 V GTP 6 1_555 A P G 2 V G 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? hydrog WATSON-CRICK hydrog1 A N1 GTP 1 V GTP 6 1_555 A N3 C 50 V C 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 GTP 1 V GTP 6 1_555 A O2 C 50 V C 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 GTP 1 V GTP 6 1_555 A N4 C 50 V C 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 G 2 V G 7 1_555 A N3 C 49 V C 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 G 2 V G 7 1_555 A O2 C 49 V C 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 G 2 V G 7 1_555 A N4 C 49 V C 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 C 3 V C 8 1_555 A N1 G 48 V G 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 C 3 V C 8 1_555 A O6 G 48 V G 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 C 3 V C 8 1_555 A N2 G 48 V G 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 G 4 V G 9 1_555 A N3 C 47 V C 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 G 4 V G 9 1_555 A O2 C 47 V C 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 G 4 V G 9 1_555 A N4 C 47 V C 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 U 5 V U 10 1_555 A N1 A 46 V A 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O4 U 5 V U 10 1_555 A N6 A 46 V A 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog15 A N7 G 6 V G 11 1_555 A N2 G 45 V G 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog16 A O6 G 6 V G 11 1_555 A N1 G 45 V G 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_8_PAIR hydrog17 A N1 G 7 V G 12 1_555 A N1 A 44 V A 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_8_PAIR hydrog18 A O6 G 7 V G 12 1_555 A N6 A 44 V A 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog19 A N3 U 8 V U 13 1_555 A O6 G 43 V G 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog20 A O2 U 8 V U 13 1_555 A N1 G 43 V G 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N3 C 9 V C 14 1_555 A N1 G 42 V G 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N4 C 9 V C 14 1_555 A O6 G 42 V G 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O2 C 9 V C 14 1_555 A N2 G 42 V G 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 C 10 V C 15 1_555 A N1 G 41 V G 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N4 C 10 V C 15 1_555 A O6 G 41 V G 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O2 C 10 V C 15 1_555 A N2 G 41 V G 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N1 G 11 V G 16 1_555 A N3 C 40 V C 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N2 G 11 V G 16 1_555 A O2 C 40 V C 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O6 G 11 V G 16 1_555 A N4 C 40 V C 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'U-A PAIR' hydrog30 A O2 U 12 V U 17 1_555 A N6 A 15 V A 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N3 U 12 V U 17 1_555 A N1 A 39 V A 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O4 U 12 V U 17 1_555 A N6 A 39 V A 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-C MISPAIR' hydrog33 A N6 A 15 V A 20 1_555 A O2 C 40 V C 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-A MISPAIR' hydrog34 A N6 A 16 V A 21 1_555 A N3 A 39 V A 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 A N1 G 20 V G 25 1_555 A N3 C 37 V C 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 A N2 G 20 V G 25 1_555 A O2 C 37 V C 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 A O6 G 20 V G 25 1_555 A N4 C 37 V C 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog38 A N3 U 21 V U 26 1_555 A N1 A 36 V A 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog39 A O4 U 21 V U 26 1_555 A N6 A 36 V A 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog40 A N3 U 22 V U 27 1_555 A N1 A 35 V A 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog41 A O4 U 22 V U 27 1_555 A N6 A 35 V A 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog42 A N3 C 23 V C 28 1_555 A N1 G 34 V G 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog43 A N4 C 23 V C 28 1_555 A O6 G 34 V G 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog44 A O2 C 23 V C 28 1_555 A N2 G 34 V G 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog45 A N3 C 24 V C 29 1_555 A N1 G 33 V G 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog46 A N4 C 24 V C 29 1_555 A O6 G 33 V G 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog47 A O2 C 24 V C 29 1_555 A N2 G 33 V G 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog48 A N3 U 25 V U 30 1_555 A N1 A 32 V A 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog49 A O4 U 25 V U 30 1_555 A N6 A 32 V A 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog50 A N3 C 26 V C 31 1_555 A N1 G 31 V G 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog51 A N4 C 26 V C 31 1_555 A O6 G 31 V G 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog52 A O2 C 26 V C 31 1_555 A N2 G 31 V G 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'G-A MISPAIR' hydrog53 A N2 G 27 V G 32 1_555 A N7 A 30 V A 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C19 H23 N7 O6' _chem_comp.formula_weight 445.429 _chem_comp.id THG _chem_comp.mon_nstd_flag . _chem_comp.name (6S)-5,6,7,8-TETRAHYDROFOLATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C2 THG sing 173 n y N3 C4 THG sing 174 n y N3 HN3 THG sing 175 n n C2 N1 THG doub 176 n y C2 N2 THG sing 177 n n N1 C8A THG sing 178 n y C8A C4A THG doub 179 n y C8A N8 THG sing 180 n n C4A C4 THG sing 181 n y C4A N5 THG sing 182 n n C4 O4 THG doub 183 n n N8 C7 THG sing 184 n n N8 HN8 THG sing 185 n n C7 C6 THG sing 186 n n C7 HC71 THG sing 187 n n C7 HC72 THG sing 188 n n C6 N5 THG sing 189 n n C6 C9 THG sing 190 n n C6 HC6 THG sing 191 n n N5 HN5 THG sing 192 n n C9 N10 THG sing 193 n n C9 HC91 THG sing 194 n n C9 HC92 THG sing 195 n n N10 C4' THG sing 196 n n N10 H10 THG sing 197 n n C4' C3' THG doub 198 n y C4' C5' THG sing 199 n y C3' C2' THG sing 200 n y C3' HC3 THG sing 201 n n C2' C1' THG doub 202 n y C2' HC2 THG sing 203 n n C1' C6' THG sing 204 n y C1' C11 THG sing 205 n n C6' C5' THG doub 206 n y C6' HC61 THG sing 207 n n C5' HC5 THG sing 208 n n C11 N THG sing 209 n n C11 O11 THG doub 210 n n N CA THG sing 211 n n N HN THG sing 212 n n CA C THG sing 213 n n CA CB THG sing 214 n n CA HCA THG sing 215 n n C OX2 THG sing 216 n n C OX1 THG doub 217 n n OX2 HX2 THG sing 218 n n CB CG THG sing 219 n n CB HCB1 THG sing 220 n n CB HCB2 THG sing 221 n n CG CD THG sing 222 n n CG HCG1 THG sing 223 n n CG HCG2 THG sing 224 n n CD OE1 THG doub 225 n n CD OE2 THG sing 226 n n OE2 HE2 THG sing 227 n n N2 HN21 THG sing 228 n n N2 HN22 THG sing 229 n n # _atom_sites.entry_id 7WI9 _atom_sites.fract_transf_matrix[1][1] 0.015004 _atom_sites.fract_transf_matrix[1][2] 0.008663 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017326 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010813 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THG V 1 101 101 THG THG . C 3 SEY V 1 102 201 SEY SEY . D 3 SEY V 1 103 301 SEY SEY . E 3 SEY V 1 104 401 SEY SEY . F 3 SEY V 1 105 501 SEY SEY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 THG . . . B 2 23.788 26.134 25.008 1 71.75 ? N3 THG 101 V 1 HETATM 2 C C2 THG . . . B 2 23.667 26.027 26.363 1 80.13 ? C2 THG 101 V 1 HETATM 3 N N1 THG . . . B 2 22.558 25.652 27.04 1 67.84 ? N1 THG 101 V 1 HETATM 4 C C8A THG . . . B 2 21.496 25.359 26.263 1 64.91 ? C8A THG 101 V 1 HETATM 5 C C4A THG . . . B 2 21.49 25.424 24.873 1 62.5 ? C4A THG 101 V 1 HETATM 6 C C4 THG . . . B 2 22.704 25.832 24.264 1 77.65 ? C4 THG 101 V 1 HETATM 7 N N8 THG . . . B 2 20.343 24.966 26.851 1 73.48 ? N8 THG 101 V 1 HETATM 8 C C7 THG . . . B 2 19.074 24.941 26.141 1 74.94 ? C7 THG 101 V 1 HETATM 9 C C6 THG . . . B 2 19.207 24.495 24.679 1 65.99 ? C6 THG 101 V 1 HETATM 10 N N5 THG . . . B 2 20.391 25.118 24.099 1 68.65 ? N5 THG 101 V 1 HETATM 11 C C9 THG . . . B 2 19.344 22.972 24.607 1 81.99 ? C9 THG 101 V 1 HETATM 12 O O4 THG . . . B 2 22.832 25.935 23.038 1 79.86 ? O4 THG 101 V 1 HETATM 13 N N2 THG . . . B 2 24.777 26.339 27.076 1 62.75 ? N2 THG 101 V 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #