data_7WIY # _model_server_result.job_id s5YMsNSrAXj27gvTGi_4sA _model_server_result.datetime_utc '2024-10-20 03:49:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wiy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 7WIY # _exptl.entry_id 7WIY _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WIY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WIY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 318 B HIS 318 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc2 A NE2 HIS 323 B HIS 323 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc3 A OE2 GLU 363 B GLU 363 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc4 B NE2 HIS 318 C HIS 318 1_555 G FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc5 B NE2 HIS 323 C HIS 323 1_555 G FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc6 B OE2 GLU 363 C GLU 363 1_555 G FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc7 G FE FE . C FE 501 1_555 H N3 IMD . C IMD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc8 C NE2 HIS 318 D HIS 318 1_555 I FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc9 C NE2 HIS 323 D HIS 323 1_555 I FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc10 C OE2 GLU 363 D GLU 363 1_555 I FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc11 I FE FE . D FE 501 1_555 J N3 IMD . D IMD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc12 D NE2 HIS 318 A HIS 318 1_555 K FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc13 D NE2 HIS 323 A HIS 323 1_555 K FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc14 D OE2 GLU 363 A GLU 363 1_555 K FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 171 n y N1 C5 IMD sing 172 n y N1 HN1 IMD sing 173 n n C2 N3 IMD doub 174 n y C2 H2 IMD sing 175 n n N3 C4 IMD sing 176 n y N3 HN3 IMD sing 177 n n C4 C5 IMD doub 178 n y C4 H4 IMD sing 179 n n C5 H5 IMD sing 180 n n # _atom_sites.entry_id 7WIY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FE B 1 501 491 FE FE . F 3 IMD B 1 502 492 IMD IMD . G 2 FE C 1 501 491 FE FE . H 3 IMD C 1 502 492 IMD IMD . I 2 FE D 1 501 491 FE FE . J 3 IMD D 1 502 492 IMD IMD . K 2 FE A 1 501 491 FE FE . L 3 IMD A 1 502 492 IMD IMD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . F 3 136.762 83.244 110.213 1 30.77 ? N1 IMD 502 B 1 HETATM 2 C C2 IMD . . . F 3 136.433 84.504 109.881 1 30.77 ? C2 IMD 502 B 1 HETATM 3 N N3 IMD . . . F 3 135.128 84.687 110.161 1 30.77 ? N3 IMD 502 B 1 HETATM 4 C C4 IMD . . . F 3 134.636 83.548 110.669 1 30.77 ? C4 IMD 502 B 1 HETATM 5 C C5 IMD . . . F 3 135.667 82.632 110.702 1 30.77 ? C5 IMD 502 B 1 HETATM 6 H HN1 IMD . . . F 3 137.648 82.843 110.115 1 30.77 ? HN1 IMD 502 B 1 HETATM 7 H H2 IMD . . . F 3 137.044 85.168 109.504 1 30.77 ? H2 IMD 502 B 1 HETATM 8 H HN3 IMD . . . F 3 134.619 85.507 110.024 1 30.77 ? HN3 IMD 502 B 1 HETATM 9 H H4 IMD . . . F 3 133.719 83.398 110.962 1 30.77 ? H4 IMD 502 B 1 HETATM 10 H H5 IMD . . . F 3 135.609 81.711 111.025 1 30.77 ? H5 IMD 502 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #