data_7WJS # _model_server_result.job_id xtFqU65uSGTZivSqZ19GqQ _model_server_result.datetime_utc '2024-11-24 19:17:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wjs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 7WJS # _exptl.entry_id 7WJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7WJS _cell.length_a 141.205 _cell.length_b 141.205 _cell.length_c 132.727 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,P 1 1 B,H,I,J,K,Q 2 1 C,L,M,N,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7WJS _atom_sites.fract_transf_matrix[1][1] 0.007082 _atom_sites.fract_transf_matrix[1][2] 0.004089 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 JFL A 1 201 1 JFL JFL . E 3 GOL A 1 202 1 GOL GOL . F 3 GOL A 1 203 2 GOL GOL . G 3 GOL A 1 204 4 GOL GOL . H 2 JFL B 1 201 2 JFL JFL . I 3 GOL B 1 202 3 GOL GOL . J 3 GOL B 1 203 6 GOL GOL . K 3 GOL B 1 204 7 GOL GOL . L 2 JFL C 1 201 3 JFL JFL . M 3 GOL C 1 202 5 GOL GOL . N 3 GOL C 1 203 8 GOL GOL . O 3 GOL C 1 204 9 GOL GOL . P 4 HOH A 1 301 3 HOH HOH . P 4 HOH A 2 302 13 HOH HOH . P 4 HOH A 3 303 1 HOH HOH . P 4 HOH A 4 304 5 HOH HOH . P 4 HOH A 5 305 7 HOH HOH . P 4 HOH A 6 306 9 HOH HOH . P 4 HOH A 7 307 12 HOH HOH . P 4 HOH A 8 308 8 HOH HOH . P 4 HOH A 9 309 11 HOH HOH . P 4 HOH A 10 310 17 HOH HOH . P 4 HOH A 11 311 18 HOH HOH . Q 4 HOH B 1 301 4 HOH HOH . Q 4 HOH B 2 302 2 HOH HOH . Q 4 HOH B 3 303 14 HOH HOH . Q 4 HOH B 4 304 6 HOH HOH . Q 4 HOH B 5 305 15 HOH HOH . Q 4 HOH B 6 306 10 HOH HOH . R 4 HOH C 1 301 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 -66.476 38.835 17.366 1 85.16 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . E 3 -67.094 38.755 16.066 1 78 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . E 3 -65.255 39.768 17.298 1 90.42 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . E 3 -65.625 41.099 17.692 1 91.82 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . E 3 -64.121 39.225 18.18 1 91.68 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . E 3 -62.927 40.031 18.176 1 84.58 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 466 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #