data_7WKY # _model_server_result.job_id EwtFrjRzmm5LeVfXw9pNng _model_server_result.datetime_utc '2024-11-24 11:17:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wky # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7WKY # _exptl.entry_id 7WKY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 555.639 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-cyclopentyl-1~{H}-imidazol-5-yl)-7-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-5-methyl-furo[3,2-c]pyridin-4-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7WKY _cell.length_a 140.846 _cell.length_b 140.846 _cell.length_c 131.832 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WKY _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,M 1 1 B,H,I,J,N 2 1 C,K,L,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 H N N ? 2 K N N # _chem_comp.formula 'C33 H34 F N3 O4' _chem_comp.formula_weight 555.639 _chem_comp.id JFR _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-cyclopentyl-1~{H}-imidazol-5-yl)-7-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-5-methyl-furo[3,2-c]pyridin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBO CAQ JFR sing 186 n n OBN CAQ JFR sing 187 n n CAQ CBM JFR sing 188 n n CAQ CAM JFR sing 189 n n CAM CAL JFR doub 190 n y CAM CAN JFR sing 191 n y CAL CAJ JFR sing 192 n y CAN CAO JFR doub 193 n y CBB NBC JFR sing 194 n y CBB CAK JFR doub 195 n y NBC CBD JFR doub 196 n y CBH CBG JFR sing 197 n n CBH CBI JFR sing 198 n n CAJ CAF JFR sing 199 n n CAJ CAP JFR doub 200 n y CBG CBF JFR sing 201 n n CAO CAP JFR sing 202 n y OAG CAA JFR sing 203 n y OAG CAH JFR sing 204 n y CAF CAA JFR sing 205 n n CAF CAE JFR doub 206 n n CAK CAH JFR sing 207 n n CAK NBE JFR sing 208 n y CAA CAB JFR doub 209 n y CAH CAI JFR doub 210 n y CBA CAX JFR sing 211 n n CAE NAD JFR sing 212 n n CBD NBE JFR sing 213 n y CBD CBF JFR sing 214 n n CAP OAR JFR sing 215 n n CAB CAI JFR sing 216 n y CAB CAC JFR sing 217 n n NAD CAC JFR sing 218 n n NAD CBL JFR sing 219 n n CAC OBK JFR doub 220 n n CBF CBJ JFR sing 221 n n CBI CBJ JFR sing 222 n n OAR CAS JFR sing 223 n n CAX CAS JFR doub 224 n y CAX CAW JFR sing 225 n y CAS CAT JFR sing 226 n y CAW CAV JFR doub 227 n y CAT CAZ JFR sing 228 n n CAT CAU JFR doub 229 n y CAV CAU JFR sing 230 n y CAV FAY JFR sing 231 n n CBG H1 JFR sing 232 n n CBG H2 JFR sing 233 n n CBH H3 JFR sing 234 n n CBH H4 JFR sing 235 n n CBI H5 JFR sing 236 n n CBI H6 JFR sing 237 n n CBJ H7 JFR sing 238 n n CBJ H8 JFR sing 239 n n CBF H9 JFR sing 240 n n NBE H10 JFR sing 241 n n CBB H12 JFR sing 242 n n CAI H13 JFR sing 243 n n CBL H14 JFR sing 244 n n CBL H15 JFR sing 245 n n CBL H16 JFR sing 246 n n CAE H17 JFR sing 247 n n CAL H18 JFR sing 248 n n CBM H19 JFR sing 249 n n CBM H20 JFR sing 250 n n CBM H21 JFR sing 251 n n CBO H22 JFR sing 252 n n CBO H23 JFR sing 253 n n CBO H24 JFR sing 254 n n OBN H25 JFR sing 255 n n CAN H26 JFR sing 256 n n CAO H27 JFR sing 257 n n CAZ H28 JFR sing 258 n n CAZ H29 JFR sing 259 n n CAZ H30 JFR sing 260 n n CAU H31 JFR sing 261 n n CAW H32 JFR sing 262 n n CBA H33 JFR sing 263 n n CBA H34 JFR sing 264 n n CBA H35 JFR sing 265 n n # _atom_sites.entry_id 7WKY _atom_sites.fract_transf_matrix[1][1] 0.0071 _atom_sites.fract_transf_matrix[1][2] 0.004099 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007585 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 JFR A 1 201 1 JFR JFR . E 3 GOL A 1 202 1 GOL GOL . F 3 GOL A 1 203 2 GOL GOL . G 3 GOL A 1 204 5 GOL GOL . H 2 JFR B 1 201 2 JFR JFR . I 3 GOL B 1 202 3 GOL GOL . J 3 GOL B 1 203 6 GOL GOL . K 2 JFR C 1 201 3 JFR JFR . L 3 GOL C 1 202 4 GOL GOL . M 4 HOH A 1 301 5 HOH HOH . M 4 HOH A 2 302 14 HOH HOH . M 4 HOH A 3 303 10 HOH HOH . M 4 HOH A 4 304 9 HOH HOH . M 4 HOH A 5 305 13 HOH HOH . M 4 HOH A 6 306 6 HOH HOH . M 4 HOH A 7 307 11 HOH HOH . M 4 HOH A 8 308 4 HOH HOH . M 4 HOH A 9 309 12 HOH HOH . N 4 HOH B 1 301 3 HOH HOH . N 4 HOH B 2 302 2 HOH HOH . N 4 HOH B 3 303 7 HOH HOH . N 4 HOH B 4 304 8 HOH HOH . O 4 HOH C 1 301 15 HOH HOH . O 4 HOH C 2 302 1 HOH HOH . O 4 HOH C 3 303 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBG JFR . . . D 2 -71.214 30.43 5.826 1 86.73 ? CBG JFR 201 A 1 HETATM 2 C CBH JFR . . . D 2 -72.047 29.199 5.719 1 88.77 ? CBH JFR 201 A 1 HETATM 3 C CBI JFR . . . D 2 -72.239 28.913 7.232 1 86.08 ? CBI JFR 201 A 1 HETATM 4 C CBJ JFR . . . D 2 -70.86 29.024 7.826 1 86.51 ? CBJ JFR 201 A 1 HETATM 5 C CBF JFR . . . D 2 -70.202 30.12 6.962 1 90.82 ? CBF JFR 201 A 1 HETATM 6 C CBD JFR . . . D 2 -68.786 29.699 6.416 1 85.36 ? CBD JFR 201 A 1 HETATM 7 N NBE JFR . . . D 2 -67.694 30.362 6.771 1 82.68 ? NBE JFR 201 A 1 HETATM 8 N NBC JFR . . . D 2 -68.46 28.706 5.576 1 76.9 ? NBC JFR 201 A 1 HETATM 9 C CBB JFR . . . D 2 -67.133 28.758 5.414 1 75.83 ? CBB JFR 201 A 1 HETATM 10 C CAK JFR . . . D 2 -66.67 29.782 6.152 1 78.76 ? CAK JFR 201 A 1 HETATM 11 C CAH JFR . . . D 2 -65.383 30.199 6.264 1 74.8 ? CAH JFR 201 A 1 HETATM 12 C CAI JFR . . . D 2 -64.953 31.422 6.598 1 71.05 ? CAI JFR 201 A 1 HETATM 13 O OAG JFR . . . D 2 -64.361 29.464 6.053 1 74.29 ? OAG JFR 201 A 1 HETATM 14 C CAA JFR . . . D 2 -63.241 30.192 6.237 1 69.3 ? CAA JFR 201 A 1 HETATM 15 C CAB JFR . . . D 2 -63.615 31.435 6.589 1 70.73 ? CAB JFR 201 A 1 HETATM 16 C CAC JFR . . . D 2 -62.701 32.41 6.854 1 72.21 ? CAC JFR 201 A 1 HETATM 17 O OBK JFR . . . D 2 -63.024 33.559 7.19 1 74.23 ? OBK JFR 201 A 1 HETATM 18 N NAD JFR . . . D 2 -61.391 32.134 6.771 1 65.55 ? NAD JFR 201 A 1 HETATM 19 C CBL JFR . . . D 2 -60.375 33.176 7.055 1 63.02 ? CBL JFR 201 A 1 HETATM 20 C CAE JFR . . . D 2 -61.002 30.834 6.405 1 68.54 ? CAE JFR 201 A 1 HETATM 21 C CAF JFR . . . D 2 -61.953 29.844 6.136 1 67.3 ? CAF JFR 201 A 1 HETATM 22 C CAJ JFR . . . D 2 -61.509 28.555 5.733 1 66.71 ? CAJ JFR 201 A 1 HETATM 23 C CAL JFR . . . D 2 -60.742 28.457 4.552 1 68.29 ? CAL JFR 201 A 1 HETATM 24 C CAM JFR . . . D 2 -60.238 27.248 4.037 1 67.64 ? CAM JFR 201 A 1 HETATM 25 C CAQ JFR . . . D 2 -59.438 27.159 2.834 1 68.66 ? CAQ JFR 201 A 1 HETATM 26 C CBM JFR . . . D 2 -58.034 26.746 3.314 1 60.46 ? CBM JFR 201 A 1 HETATM 27 C CBO JFR . . . D 2 -59.991 26.133 1.817 1 67.42 ? CBO JFR 201 A 1 HETATM 28 O OBN JFR . . . D 2 -59.374 28.4 2.034 1 72.26 ? OBN JFR 201 A 1 HETATM 29 C CAN JFR . . . D 2 -60.503 26.102 4.788 1 66.85 ? CAN JFR 201 A 1 HETATM 30 C CAO JFR . . . D 2 -61.262 26.155 5.952 1 64.05 ? CAO JFR 201 A 1 HETATM 31 C CAP JFR . . . D 2 -61.771 27.371 6.426 1 64.24 ? CAP JFR 201 A 1 HETATM 32 O OAR JFR . . . D 2 -62.518 27.513 7.557 1 56.66 ? OAR JFR 201 A 1 HETATM 33 C CAS JFR . . . D 2 -63.024 26.429 8.205 1 50.69 ? CAS JFR 201 A 1 HETATM 34 C CAT JFR . . . D 2 -62.483 26.114 9.456 1 50.48 ? CAT JFR 201 A 1 HETATM 35 C CAZ JFR . . . D 2 -61.459 26.863 10.046 1 50.53 ? CAZ JFR 201 A 1 HETATM 36 C CAU JFR . . . D 2 -63.009 25.018 10.143 1 53.53 ? CAU JFR 201 A 1 HETATM 37 C CAV JFR . . . D 2 -64.04 24.256 9.587 1 52.22 ? CAV JFR 201 A 1 HETATM 38 F FAY JFR . . . D 2 -64.508 23.23 10.263 1 59.66 ? FAY JFR 201 A 1 HETATM 39 C CAW JFR . . . D 2 -64.567 24.578 8.337 1 49.11 ? CAW JFR 201 A 1 HETATM 40 C CAX JFR . . . D 2 -64.071 25.683 7.632 1 49.09 ? CAX JFR 201 A 1 HETATM 41 C CBA JFR . . . D 2 -64.611 25.99 6.384 1 47.87 ? CBA JFR 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 41 #