data_7WLK # _model_server_result.job_id C0xa3MoVLwRPnZ6MPSCFQg _model_server_result.datetime_utc '2024-10-15 11:20:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wlk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2302}' # _entry.id 7WLK # _exptl.entry_id 7WLK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WLK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 239 A CYS 239 1_555 A SG CYS 280 A CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 269 A CYS 269 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 1335 A CYS 1335 1_555 A SG CYS 1349 A CYS 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 1646 A CYS 1646 1_555 A SG CYS 1652 A CYS 1652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 1691 A CYS 1691 1_555 A SG CYS 1698 A CYS 1698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 1342 A ASN 1342 1_555 N C1 NAG . A NAG 2313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale2 A ND2 ASN 1345 A ASN 1345 1_555 L C1 NAG . A NAG 2311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 A CD1 PHE 1672 A PHE 1672 1_555 O CAA Y01 . A Y01 2314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.492 ? metalc ? metalc1 A OE2 GLU 357 A GLU 357 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc2 A OD1 ASP 1380 A ASP 1380 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # _atom_sites.entry_id 7WLK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7TB A 1 2301 2250 7TB L02 . C 3 3PE A 1 2302 2268 3PE 3PE . D 3 3PE A 1 2303 2269 3PE 3PE . E 4 CA A 1 2304 2270 CA CA . F 3 3PE A 1 2305 2272 3PE 3PE . G 3 3PE A 1 2306 2273 3PE 3PE . H 3 3PE A 1 2307 2274 3PE 3PE . I 5 Y01 A 1 2308 2276 Y01 Y01 . J 5 Y01 A 1 2309 2277 Y01 Y01 . K 5 Y01 A 1 2310 2278 Y01 Y01 . L 6 NAG A 1 2311 2279 NAG NAG . M 5 Y01 A 1 2312 2281 Y01 Y01 . N 6 NAG A 1 2313 2282 NAG NAG . O 5 Y01 A 1 2314 2283 Y01 Y01 . P 3 3PE A 1 2315 2284 3PE 3PE . Q 5 Y01 A 1 2316 2285 Y01 Y01 . R 4 CA A 1 2317 2286 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . C 3 139.069 128.089 142.441 1 46.49 ? P 3PE 2302 A 1 HETATM 2 O O11 3PE . . . C 3 140.143 129.044 141.477 1 46.49 ? O11 3PE 2302 A 1 HETATM 3 O O12 3PE . . . C 3 139.907 127.293 143.522 1 46.49 ? O12 3PE 2302 A 1 HETATM 4 O O13 3PE . . . C 3 138.216 126.969 141.44 1 46.49 ? O13 3PE 2302 A 1 HETATM 5 O O14 3PE . . . C 3 138.022 129.024 143.171 1 46.49 ? O14 3PE 2302 A 1 HETATM 6 C C1 3PE . . . C 3 141.532 128.589 141.32 1 46.49 ? C1 3PE 2302 A 1 HETATM 7 C C2 3PE . . . C 3 142.467 129.796 140.827 1 46.49 ? C2 3PE 2302 A 1 HETATM 8 C C3 3PE . . . C 3 143.725 129.942 141.801 1 46.49 ? C3 3PE 2302 A 1 HETATM 9 O O31 3PE . . . C 3 144.754 130.723 141.108 1 46.49 ? O31 3PE 2302 A 1 HETATM 10 O O32 3PE . . . C 3 143.831 132.593 142.178 1 46.49 ? O32 3PE 2302 A 1 HETATM 11 C C31 3PE . . . C 3 144.742 132.145 141.467 1 46.49 ? C31 3PE 2302 A 1 HETATM 12 C C32 3PE . . . C 3 145.892 133.13 140.955 1 46.49 ? C32 3PE 2302 A 1 HETATM 13 C C33 3PE . . . C 3 145.463 133.769 139.554 1 46.49 ? C33 3PE 2302 A 1 HETATM 14 C C34 3PE . . . C 3 146.166 135.198 139.407 1 46.49 ? C34 3PE 2302 A 1 HETATM 15 C C35 3PE . . . C 3 147.101 135.204 138.109 1 46.49 ? C35 3PE 2302 A 1 HETATM 16 C C36 3PE . . . C 3 148.617 135.447 138.563 1 46.49 ? C36 3PE 2302 A 1 HETATM 17 C C37 3PE . . . C 3 149.586 135.26 137.301 1 46.49 ? C37 3PE 2302 A 1 HETATM 18 O O21 3PE . . . C 3 142.992 129.507 139.493 1 46.49 ? O21 3PE 2302 A 1 HETATM 19 O O22 3PE . . . C 3 141.427 130.894 138.462 1 46.49 ? O22 3PE 2302 A 1 HETATM 20 C C21 3PE . . . C 3 142.605 130.506 138.5 1 46.49 ? C21 3PE 2302 A 1 HETATM 21 C C22 3PE . . . C 3 143.687 131.095 137.476 1 46.49 ? C22 3PE 2302 A 1 HETATM 22 C C23 3PE . . . C 3 143.703 130.213 136.14 1 46.49 ? C23 3PE 2302 A 1 HETATM 23 C C24 3PE . . . C 3 144.056 131.147 134.887 1 46.49 ? C24 3PE 2302 A 1 HETATM 24 C C25 3PE . . . C 3 145.586 130.925 134.475 1 46.49 ? C25 3PE 2302 A 1 HETATM 25 C C26 3PE . . . C 3 146.376 132.31 134.601 1 46.49 ? C26 3PE 2302 A 1 HETATM 26 C C27 3PE . . . C 3 147.953 132.054 134.464 1 46.49 ? C27 3PE 2302 A 1 HETATM 27 C C28 3PE . . . C 3 148.264 131.062 133.245 1 46.49 ? C28 3PE 2302 A 1 HETATM 28 C C29 3PE . . . C 3 149.853 130.887 133.121 1 46.49 ? C29 3PE 2302 A 1 HETATM 29 C C2A 3PE . . . C 3 150.246 129.333 133.156 1 46.49 ? C2A 3PE 2302 A 1 HETATM 30 C C2B 3PE . . . C 3 150.199 128.729 131.671 1 46.49 ? C2B 3PE 2302 A 1 HETATM 31 C C2C 3PE . . . C 3 150.8 127.242 131.66 1 46.49 ? C2C 3PE 2302 A 1 HETATM 32 C C2D 3PE . . . C 3 150.8 126.677 130.16 1 46.49 ? C2D 3PE 2302 A 1 HETATM 33 C C2E 3PE . . . C 3 151.132 125.11 130.172 1 46.49 ? C2E 3PE 2302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #