data_7WLK # _model_server_result.job_id 7C27GEOD9sToO2s0YJEGMA _model_server_result.datetime_utc '2025-08-31 12:36:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wlk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2309}' # _entry.id 7WLK # _exptl.entry_id 7WLK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WLK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 M N N ? 5 O N N ? 5 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 239 A CYS 239 1_555 A SG CYS 280 A CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 269 A CYS 269 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 1335 A CYS 1335 1_555 A SG CYS 1349 A CYS 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 1646 A CYS 1646 1_555 A SG CYS 1652 A CYS 1652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 1691 A CYS 1691 1_555 A SG CYS 1698 A CYS 1698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 1342 A ASN 1342 1_555 N C1 NAG . A NAG 2313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale2 A ND2 ASN 1345 A ASN 1345 1_555 L C1 NAG . A NAG 2311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? metalc ? metalc1 A OE2 GLU 357 A GLU 357 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc2 A OD1 ASP 1380 A ASP 1380 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 615 n n CBA CAB Y01 sing 616 n n CBA CAN Y01 sing 617 n n CAN CAJ Y01 sing 618 n n CAJ CAO Y01 sing 619 n n CAO CBB Y01 sing 620 n n CBB CAC Y01 sing 621 n n CBB CBE Y01 sing 622 n n CBE CAP Y01 sing 623 n n CBE CBI Y01 sing 624 n n CAP CAQ Y01 sing 625 n n CAQ CBG Y01 sing 626 n n CBG CBI Y01 sing 627 n n CBG CBD Y01 sing 628 n n CBI CAE Y01 sing 629 n n CBI CAU Y01 sing 630 n n CAU CAS Y01 sing 631 n n CAS CBF Y01 sing 632 n n CBF CBD Y01 sing 633 n n CBF CBH Y01 sing 634 n n CBD CAK Y01 sing 635 n n CAK CAI Y01 sing 636 n n CAI CAZ Y01 doub 637 n n CAZ CAV Y01 sing 638 n n CAZ CBH Y01 sing 639 n n CAV CBC Y01 sing 640 n n CBH CAD Y01 sing 641 n n CBH CAT Y01 sing 642 n n CAT CAR Y01 sing 643 n n CAR CBC Y01 sing 644 n n CBC OAW Y01 sing 645 n n OAW CAY Y01 sing 646 n n CAY OAG Y01 doub 647 n n CAY CAM Y01 sing 648 n n CAM CAL Y01 sing 649 n n CAL CAX Y01 sing 650 n n CAX OAH Y01 sing 651 n n CAX OAF Y01 doub 652 n n CAA HAA1 Y01 sing 653 n n CAA HAA2 Y01 sing 654 n n CAA HAA3 Y01 sing 655 n n CBA HBA Y01 sing 656 n n CAB HAB1 Y01 sing 657 n n CAB HAB2 Y01 sing 658 n n CAB HAB3 Y01 sing 659 n n CAN HAN1 Y01 sing 660 n n CAN HAN2 Y01 sing 661 n n CAJ HAJ1 Y01 sing 662 n n CAJ HAJ2 Y01 sing 663 n n CAO HAO1 Y01 sing 664 n n CAO HAO2 Y01 sing 665 n n CBB HBB Y01 sing 666 n n CAC HAC1 Y01 sing 667 n n CAC HAC2 Y01 sing 668 n n CAC HAC3 Y01 sing 669 n n CBE HBE Y01 sing 670 n n CAP HAP1 Y01 sing 671 n n CAP HAP2 Y01 sing 672 n n CAQ HAQ1 Y01 sing 673 n n CAQ HAQ2 Y01 sing 674 n n CBG HBG Y01 sing 675 n n CBD HBD Y01 sing 676 n n CAE HAE1 Y01 sing 677 n n CAE HAE2 Y01 sing 678 n n CAE HAE3 Y01 sing 679 n n CAU HAU1 Y01 sing 680 n n CAU HAU2 Y01 sing 681 n n CAS HAS1 Y01 sing 682 n n CAS HAS2 Y01 sing 683 n n CBF HBF Y01 sing 684 n n CAK HAK1 Y01 sing 685 n n CAK HAK2 Y01 sing 686 n n CAI HAI Y01 sing 687 n n CAV HAV1 Y01 sing 688 n n CAV HAV2 Y01 sing 689 n n CBC HBC Y01 sing 690 n n CAD HAD1 Y01 sing 691 n n CAD HAD2 Y01 sing 692 n n CAD HAD3 Y01 sing 693 n n CAT HAT1 Y01 sing 694 n n CAT HAT2 Y01 sing 695 n n CAR HAR1 Y01 sing 696 n n CAR HAR2 Y01 sing 697 n n CAM HAM1 Y01 sing 698 n n CAM HAM2 Y01 sing 699 n n CAL HAL1 Y01 sing 700 n n CAL HAL2 Y01 sing 701 n n OAH HAH Y01 sing 702 n n # _atom_sites.entry_id 7WLK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7TB A 1 2301 2250 7TB L02 . C 3 3PE A 1 2302 2268 3PE 3PE . D 3 3PE A 1 2303 2269 3PE 3PE . E 4 CA A 1 2304 2270 CA CA . F 3 3PE A 1 2305 2272 3PE 3PE . G 3 3PE A 1 2306 2273 3PE 3PE . H 3 3PE A 1 2307 2274 3PE 3PE . I 5 Y01 A 1 2308 2276 Y01 Y01 . J 5 Y01 A 1 2309 2277 Y01 Y01 . K 5 Y01 A 1 2310 2278 Y01 Y01 . L 6 NAG A 1 2311 2279 NAG NAG . M 5 Y01 A 1 2312 2281 Y01 Y01 . N 6 NAG A 1 2313 2282 NAG NAG . O 5 Y01 A 1 2314 2283 Y01 Y01 . P 3 3PE A 1 2315 2284 3PE 3PE . Q 5 Y01 A 1 2316 2285 Y01 Y01 . R 4 CA A 1 2317 2286 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . J 5 159.119 143.838 140.961 1 56.25 ? CAA Y01 2309 A 1 HETATM 2 C CBA Y01 . . . J 5 159.351 145.016 141.905 1 56.25 ? CBA Y01 2309 A 1 HETATM 3 C CAB Y01 . . . J 5 158.453 146.172 141.468 1 56.25 ? CAB Y01 2309 A 1 HETATM 4 C CAN Y01 . . . J 5 158.998 144.602 143.334 1 56.25 ? CAN Y01 2309 A 1 HETATM 5 C CAJ Y01 . . . J 5 160.245 144.618 144.223 1 56.25 ? CAJ Y01 2309 A 1 HETATM 6 C CAO Y01 . . . J 5 161.115 143.398 143.925 1 56.25 ? CAO Y01 2309 A 1 HETATM 7 C CBB Y01 . . . J 5 160.874 142.301 144.966 1 56.25 ? CBB Y01 2309 A 1 HETATM 8 C CAC Y01 . . . J 5 160.043 141.18 144.337 1 56.25 ? CAC Y01 2309 A 1 HETATM 9 C CBE Y01 . . . J 5 162.209 141.721 145.454 1 56.25 ? CBE Y01 2309 A 1 HETATM 10 C CAP Y01 . . . J 5 163.387 142.665 145.106 1 56.25 ? CAP Y01 2309 A 1 HETATM 11 C CAQ Y01 . . . J 5 164.167 142.9 146.425 1 56.25 ? CAQ Y01 2309 A 1 HETATM 12 C CBG Y01 . . . J 5 163.77 141.683 147.26 1 56.25 ? CBG Y01 2309 A 1 HETATM 13 C CBI Y01 . . . J 5 162.249 141.599 146.971 1 56.25 ? CBI Y01 2309 A 1 HETATM 14 C CAE Y01 . . . J 5 161.519 142.784 147.604 1 56.25 ? CAE Y01 2309 A 1 HETATM 15 C CAU Y01 . . . J 5 161.752 140.293 147.55 1 56.25 ? CAU Y01 2309 A 1 HETATM 16 C CAS Y01 . . . J 5 162.043 140.297 149.058 1 56.25 ? CAS Y01 2309 A 1 HETATM 17 C CBF Y01 . . . J 5 163.521 140.512 149.365 1 56.25 ? CBF Y01 2309 A 1 HETATM 18 C CBD Y01 . . . J 5 163.977 141.83 148.753 1 56.25 ? CBD Y01 2309 A 1 HETATM 19 C CAK Y01 . . . J 5 165.474 142.004 149.029 1 56.25 ? CAK Y01 2309 A 1 HETATM 20 C CAI Y01 . . . J 5 165.735 141.909 150.502 1 56.25 ? CAI Y01 2309 A 1 HETATM 21 C CAZ Y01 . . . J 5 165.025 141.167 151.288 1 56.25 ? CAZ Y01 2309 A 1 HETATM 22 C CAV Y01 . . . J 5 165.354 141.141 152.769 1 56.25 ? CAV Y01 2309 A 1 HETATM 23 C CBH Y01 . . . J 5 163.769 140.494 150.859 1 56.25 ? CBH Y01 2309 A 1 HETATM 24 C CAD Y01 . . . J 5 162.615 141.219 151.546 1 56.25 ? CAD Y01 2309 A 1 HETATM 25 C CAT Y01 . . . J 5 163.849 139.049 151.339 1 56.25 ? CAT Y01 2309 A 1 HETATM 26 C CAR Y01 . . . J 5 164.059 139.004 152.851 1 56.25 ? CAR Y01 2309 A 1 HETATM 27 C CBC Y01 . . . J 5 165.352 139.696 153.275 1 56.25 ? CBC Y01 2309 A 1 HETATM 28 O OAW Y01 . . . J 5 165.375 139.695 154.726 1 56.25 ? OAW Y01 2309 A 1 HETATM 29 C CAY Y01 . . . J 5 166.557 139.808 155.349 1 56.25 ? CAY Y01 2309 A 1 HETATM 30 O OAG Y01 . . . J 5 166.64 140.472 156.356 1 56.25 ? OAG Y01 2309 A 1 HETATM 31 C CAM Y01 . . . J 5 167.776 139.111 154.8 1 56.25 ? CAM Y01 2309 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #