data_7WLK # _model_server_result.job_id ksobp5fHWGL16Ue_8X4KYw _model_server_result.datetime_utc '2024-10-15 11:19:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wlk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":2316}' # _entry.id 7WLK # _exptl.entry_id 7WLK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WLK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 M N N ? 5 O N N ? 5 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 239 A CYS 239 1_555 A SG CYS 280 A CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 269 A CYS 269 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 1335 A CYS 1335 1_555 A SG CYS 1349 A CYS 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 1646 A CYS 1646 1_555 A SG CYS 1652 A CYS 1652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 1691 A CYS 1691 1_555 A SG CYS 1698 A CYS 1698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 1342 A ASN 1342 1_555 N C1 NAG . A NAG 2313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale2 A ND2 ASN 1345 A ASN 1345 1_555 L C1 NAG . A NAG 2311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 A CD1 PHE 1672 A PHE 1672 1_555 O CAA Y01 . A Y01 2314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.492 ? metalc ? metalc1 A OE2 GLU 357 A GLU 357 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc2 A OD1 ASP 1380 A ASP 1380 1_555 E CA CA . A CA 2304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WLK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7TB A 1 2301 2250 7TB L02 . C 3 3PE A 1 2302 2268 3PE 3PE . D 3 3PE A 1 2303 2269 3PE 3PE . E 4 CA A 1 2304 2270 CA CA . F 3 3PE A 1 2305 2272 3PE 3PE . G 3 3PE A 1 2306 2273 3PE 3PE . H 3 3PE A 1 2307 2274 3PE 3PE . I 5 Y01 A 1 2308 2276 Y01 Y01 . J 5 Y01 A 1 2309 2277 Y01 Y01 . K 5 Y01 A 1 2310 2278 Y01 Y01 . L 6 NAG A 1 2311 2279 NAG NAG . M 5 Y01 A 1 2312 2281 Y01 Y01 . N 6 NAG A 1 2313 2282 NAG NAG . O 5 Y01 A 1 2314 2283 Y01 Y01 . P 3 3PE A 1 2315 2284 3PE 3PE . Q 5 Y01 A 1 2316 2285 Y01 Y01 . R 4 CA A 1 2317 2286 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . Q 5 152.15 106.071 132.776 1 80.73 ? CAA Y01 2316 A 1 HETATM 2 C CBA Y01 . . . Q 5 152.07 104.876 133.728 1 80.73 ? CBA Y01 2316 A 1 HETATM 3 C CAB Y01 . . . Q 5 151.296 103.744 133.052 1 80.73 ? CAB Y01 2316 A 1 HETATM 4 C CAN Y01 . . . Q 5 151.337 105.278 135.008 1 80.73 ? CAN Y01 2316 A 1 HETATM 5 C CAJ Y01 . . . Q 5 151.331 104.104 135.991 1 80.73 ? CAJ Y01 2316 A 1 HETATM 6 C CAO Y01 . . . Q 5 152.539 104.209 136.925 1 80.73 ? CAO Y01 2316 A 1 HETATM 7 C CBB Y01 . . . Q 5 152.123 104.315 138.399 1 80.73 ? CBB Y01 2316 A 1 HETATM 8 C CAC Y01 . . . Q 5 150.653 104.727 138.536 1 80.73 ? CAC Y01 2316 A 1 HETATM 9 C CBE Y01 . . . Q 5 152.353 102.977 139.116 1 80.73 ? CBE Y01 2316 A 1 HETATM 10 C CAP Y01 . . . Q 5 153.552 102.238 138.472 1 80.73 ? CAP Y01 2316 A 1 HETATM 11 C CAQ Y01 . . . Q 5 154.6 102.072 139.601 1 80.73 ? CAQ Y01 2316 A 1 HETATM 12 C CBG Y01 . . . Q 5 153.708 101.987 140.842 1 80.73 ? CBG Y01 2316 A 1 HETATM 13 C CBI Y01 . . . Q 5 152.738 103.171 140.587 1 80.73 ? CBI Y01 2316 A 1 HETATM 14 C CAE Y01 . . . Q 5 153.492 104.49 140.764 1 80.73 ? CAE Y01 2316 A 1 HETATM 15 C CAU Y01 . . . Q 5 151.623 103.058 141.615 1 80.73 ? CAU Y01 2316 A 1 HETATM 16 C CAS Y01 . . . Q 5 152.228 103.108 143.031 1 80.73 ? CAS Y01 2316 A 1 HETATM 17 C CBF Y01 . . . Q 5 153.307 102.045 143.244 1 80.73 ? CBF Y01 2316 A 1 HETATM 18 C CBD Y01 . . . Q 5 154.391 102.207 142.179 1 80.73 ? CBD Y01 2316 A 1 HETATM 19 C CAK Y01 . . . Q 5 155.421 101.102 142.396 1 80.73 ? CAK Y01 2316 A 1 HETATM 20 C CAI Y01 . . . Q 5 156.03 101.304 143.746 1 80.73 ? CAI Y01 2316 A 1 HETATM 21 C CAZ Y01 . . . Q 5 155.352 101.78 144.739 1 80.73 ? CAZ Y01 2316 A 1 HETATM 22 C CAV Y01 . . . Q 5 155.972 101.647 146.116 1 80.73 ? CAV Y01 2316 A 1 HETATM 23 C CBH Y01 . . . Q 5 153.881 102.051 144.659 1 80.73 ? CBH Y01 2316 A 1 HETATM 24 C CAD Y01 . . . Q 5 153.644 103.416 145.306 1 80.73 ? CAD Y01 2316 A 1 HETATM 25 C CAT Y01 . . . Q 5 153.153 100.992 145.489 1 80.73 ? CAT Y01 2316 A 1 HETATM 26 C CAR Y01 . . . Q 5 153.736 100.903 146.902 1 80.73 ? CAR Y01 2316 A 1 HETATM 27 C CBC Y01 . . . Q 5 155.224 100.551 146.873 1 80.73 ? CBC Y01 2316 A 1 HETATM 28 O OAW Y01 . . . Q 5 155.716 100.494 148.239 1 80.73 ? OAW Y01 2316 A 1 HETATM 29 C CAY Y01 . . . Q 5 155.889 99.281 148.792 1 80.73 ? CAY Y01 2316 A 1 HETATM 30 O OAG Y01 . . . Q 5 156.019 98.308 148.086 1 80.73 ? OAG Y01 2316 A 1 HETATM 31 C CAM Y01 . . . Q 5 155.921 99.127 150.293 1 80.73 ? CAM Y01 2316 A 1 HETATM 32 C CAL Y01 . . . Q 5 154.497 99 150.842 1 80.73 ? CAL Y01 2316 A 1 HETATM 33 C CAX Y01 . . . Q 5 154.519 98.275 152.166 1 80.73 ? CAX Y01 2316 A 1 HETATM 34 O OAH Y01 . . . Q 5 153.39 97.737 152.654 1 80.73 ? OAH Y01 2316 A 1 HETATM 35 O OAF Y01 . . . Q 5 155.548 98.178 152.79 1 80.73 ? OAF Y01 2316 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #