data_7WLL # _model_server_result.job_id MJ0kuBGKLSsV5BA4r_6etQ _model_server_result.datetime_utc '2024-12-23 06:07:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2302}' # _entry.id 7WLL # _exptl.entry_id 7WLL _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WLL _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 K N N ? 3 Q N N ? 3 S N N ? 3 U N N ? 3 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 239 A CYS 239 1_555 A SG CYS 280 A CYS 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 269 A CYS 269 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 1335 A CYS 1335 1_555 A SG CYS 1349 A CYS 1349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 1646 A CYS 1646 1_555 A SG CYS 1652 A CYS 1652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 1691 A CYS 1691 1_555 A SG CYS 1698 A CYS 1698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A ND2 ASN 1345 A ASN 1345 1_555 N C1 NAG . A NAG 2313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale2 A NH1 ARG 1585 A ARG 1585 1_555 I OAG Y01 . A Y01 2308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? metalc ? metalc1 A OE1 GLU 357 A GLU 357 1_555 H CA CA . A CA 2307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc2 A OE2 GLU 357 A GLU 357 1_555 H CA CA . A CA 2307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc3 A OD1 ASP 1380 A ASP 1380 1_555 H CA CA . A CA 2307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.085 ? metalc ? metalc4 A O GLY 1677 A GLY 1677 1_555 G CA CA . A CA 2306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.185 ? # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # _atom_sites.entry_id 7WLL _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1II A 1 2301 2250 1II PIZ . C 3 3PE A 1 2302 2270 3PE 3PE . D 3 3PE A 1 2303 2271 3PE 3PE . E 3 3PE A 1 2304 2274 3PE 3PE . F 3 3PE A 1 2305 2275 3PE 3PE . G 4 CA A 1 2306 2276 CA CA . H 4 CA A 1 2307 2277 CA CA . I 5 Y01 A 1 2308 2278 Y01 Y01 . J 6 NAG A 1 2309 2282 NAG NAG . K 3 3PE A 1 2310 2283 3PE 3PE . L 5 Y01 A 1 2311 2286 Y01 Y01 . M 5 Y01 A 1 2312 2287 Y01 Y01 . N 6 NAG A 1 2313 2288 NAG NAG . O 5 Y01 A 1 2314 2290 Y01 Y01 . P 5 Y01 A 1 2315 2292 Y01 Y01 . Q 3 3PE A 1 2316 2293 3PE 3PE . R 5 Y01 A 1 2317 2294 Y01 Y01 . S 3 3PE A 1 2318 2296 3PE 3PE . T 5 Y01 A 1 2319 2297 Y01 Y01 . U 3 3PE A 1 2320 2298 3PE 3PE . V 3 3PE A 1 2321 2299 3PE 3PE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . C 3 138.713 127.825 142.983 1 60.03 ? P 3PE 2302 A 1 HETATM 2 O O11 3PE . . . C 3 140.172 128.543 142.388 1 60.03 ? O11 3PE 2302 A 1 HETATM 3 O O12 3PE . . . C 3 137.682 128.958 143.382 1 60.03 ? O12 3PE 2302 A 1 HETATM 4 O O13 3PE . . . C 3 138.017 126.809 141.771 1 60.03 ? O13 3PE 2302 A 1 HETATM 5 O O14 3PE . . . C 3 139.035 126.943 144.257 1 60.03 ? O14 3PE 2302 A 1 HETATM 6 C C1 3PE . . . C 3 140.133 129.348 141.159 1 60.03 ? C1 3PE 2302 A 1 HETATM 7 C C2 3PE . . . C 3 141.479 129.089 140.323 1 60.03 ? C2 3PE 2302 A 1 HETATM 8 C C3 3PE . . . C 3 141.619 130.139 139.12 1 60.03 ? C3 3PE 2302 A 1 HETATM 9 O O31 3PE . . . C 3 142.931 129.961 138.485 1 60.03 ? O31 3PE 2302 A 1 HETATM 10 O O32 3PE . . . C 3 142.097 130.855 136.47 1 60.03 ? O32 3PE 2302 A 1 HETATM 11 C C31 3PE . . . C 3 143.09 130.596 137.168 1 60.03 ? C31 3PE 2302 A 1 HETATM 12 C C32 3PE . . . C 3 144.551 130.955 136.62 1 60.03 ? C32 3PE 2302 A 1 HETATM 13 C C33 3PE . . . C 3 144.419 131.656 135.188 1 60.03 ? C33 3PE 2302 A 1 HETATM 14 C C34 3PE . . . C 3 145.507 131.041 134.191 1 60.03 ? C34 3PE 2302 A 1 HETATM 15 C C35 3PE . . . C 3 146.893 131.823 134.362 1 60.03 ? C35 3PE 2302 A 1 HETATM 16 C C36 3PE . . . C 3 147.736 131.679 133.008 1 60.03 ? C36 3PE 2302 A 1 HETATM 17 C C37 3PE . . . C 3 149.299 131.614 133.347 1 60.03 ? C37 3PE 2302 A 1 HETATM 18 C C38 3PE . . . C 3 149.745 130.081 133.467 1 60.03 ? C38 3PE 2302 A 1 HETATM 19 C C39 3PE . . . C 3 150.374 129.588 132.078 1 60.03 ? C39 3PE 2302 A 1 HETATM 20 C C3A 3PE . . . C 3 149.798 128.134 131.724 1 60.03 ? C3A 3PE 2302 A 1 HETATM 21 C C3B 3PE . . . C 3 150.807 127.373 130.74 1 60.03 ? C3B 3PE 2302 A 1 HETATM 22 C C3C 3PE . . . C 3 150.209 125.925 130.407 1 60.03 ? C3C 3PE 2302 A 1 HETATM 23 C C3D 3PE . . . C 3 151.388 124.92 129.999 1 60.03 ? C3D 3PE 2302 A 1 HETATM 24 O O21 3PE . . . C 3 142.643 129.199 141.21 1 60.03 ? O21 3PE 2302 A 1 HETATM 25 O O22 3PE . . . C 3 142.356 131.42 141.929 1 60.03 ? O22 3PE 2302 A 1 HETATM 26 C C21 3PE . . . C 3 143.117 130.57 141.439 1 60.03 ? C21 3PE 2302 A 1 HETATM 27 C C22 3PE . . . C 3 144.622 130.986 141.071 1 60.03 ? C22 3PE 2302 A 1 HETATM 28 C C23 3PE . . . C 3 144.869 132.52 141.469 1 60.03 ? C23 3PE 2302 A 1 HETATM 29 C C24 3PE . . . C 3 144.781 133.441 140.161 1 60.03 ? C24 3PE 2302 A 1 HETATM 30 C C25 3PE . . . C 3 146.042 134.426 140.124 1 60.03 ? C25 3PE 2302 A 1 HETATM 31 C C26 3PE . . . C 3 146.45 134.704 138.599 1 60.03 ? C26 3PE 2302 A 1 HETATM 32 C C27 3PE . . . C 3 147.953 135.256 138.524 1 60.03 ? C27 3PE 2302 A 1 HETATM 33 C C28 3PE . . . C 3 148.469 135.199 137.008 1 60.03 ? C28 3PE 2302 A 1 HETATM 34 C C29 3PE . . . C 3 149.999 135.666 136.917 1 60.03 ? C29 3PE 2302 A 1 HETATM 35 C C2A 3PE . . . C 3 150.942 134.386 136.697 1 60.03 ? C2A 3PE 2302 A 1 HETATM 36 C C2B 3PE . . . C 3 152.354 134.835 136.077 1 60.03 ? C2B 3PE 2302 A 1 HETATM 37 C C2C 3PE . . . C 3 153.407 133.629 136.177 1 60.03 ? C2C 3PE 2302 A 1 HETATM 38 C C2D 3PE . . . C 3 153.661 133.265 137.72 1 60.03 ? C2D 3PE 2302 A 1 HETATM 39 C C2E 3PE . . . C 3 154.825 132.168 137.853 1 60.03 ? C2E 3PE 2302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #