data_7WLU
#
_model_server_result.job_id            DNBhXYAUl8sqAsG1D2FHrQ 
_model_server_result.datetime_utc      '2024-10-15 13:15:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wlu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2601}' 
#
_entry.id    7WLU 
#
_exptl.entry_id    7WLU 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              767.132 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WLU 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WLU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C42 H89 N O8 P 1' 
_chem_comp.formula_weight    767.132 
_chem_comp.id                PLX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C23 C22 PLX sing 258 n n 
C23 H231 PLX sing 259 n n 
C23 H232 PLX sing 260 n n 
C23 H233 PLX sing 261 n n 
C22 C21 PLX sing 262 n n 
C22 H221 PLX sing 263 n n 
C22 H222 PLX sing 264 n n 
C21 C20 PLX sing 265 n n 
C21 H211 PLX sing 266 n n 
C21 H212 PLX sing 267 n n 
C20 C19 PLX sing 268 n n 
C20 H201 PLX sing 269 n n 
C20 H202 PLX sing 270 n n 
C19 C18 PLX sing 271 n n 
C19 H191 PLX sing 272 n n 
C19 H192 PLX sing 273 n n 
C18 C17 PLX sing 274 n n 
C18 H181 PLX sing 275 n n 
C18 H182 PLX sing 276 n n 
C17 C16 PLX sing 277 n n 
C17 H171 PLX sing 278 n n 
C17 H172 PLX sing 279 n n 
C16 C15 PLX sing 280 n n 
C16 H161 PLX sing 281 n n 
C16 H162 PLX sing 282 n n 
C15 C14 PLX sing 283 n n 
C15 H151 PLX sing 284 n n 
C15 H152 PLX sing 285 n n 
C14 C13 PLX sing 286 n n 
C14 H141 PLX sing 287 n n 
C14 H142 PLX sing 288 n n 
C13 C12 PLX sing 289 n n 
C13 H131 PLX sing 290 n n 
C13 H132 PLX sing 291 n n 
C12 C11 PLX sing 292 n n 
C12 H121 PLX sing 293 n n 
C12 H122 PLX sing 294 n n 
C11 C10 PLX sing 295 n n 
C11 H111 PLX sing 296 n n 
C11 H112 PLX sing 297 n n 
C10 C9 PLX sing 298 n n 
C10 H101 PLX sing 299 n n 
C10 H102 PLX sing 300 n n 
C9 C8 PLX sing 301 n n 
C9 H91 PLX sing 302 n n 
C9 H92 PLX sing 303 n n 
C8 C7 PLX sing 304 n n 
C8 H81 PLX sing 305 n n 
C8 H82 PLX sing 306 n n 
C7 C6 PLX sing 307 n n 
C7 H71 PLX sing 308 n n 
C7 H72 PLX sing 309 n n 
C6 O7 PLX sing 310 n n 
C6 O6 PLX sing 311 n n 
C6 H6 PLX sing 312 n n 
O7 HO7 PLX sing 313 n n 
O6 C4 PLX sing 314 n n 
C4 C3 PLX sing 315 n n 
C4 C5 PLX sing 316 n n 
C4 H4 PLX sing 317 n n 
C3 O4 PLX sing 318 n n 
C3 H31 PLX sing 319 n n 
C3 H32 PLX sing 320 n n 
O4 P1 PLX sing 321 n n 
P1 O1 PLX sing 322 n n 
P1 O2 PLX doub 323 n n 
P1 O3 PLX sing 324 n n 
O1 C2 PLX sing 325 n n 
C2 C1 PLX sing 326 n n 
C2 H21 PLX sing 327 n n 
C2 H22 PLX sing 328 n n 
C1 N1 PLX sing 329 n n 
C1 H11 PLX sing 330 n n 
C1 H12 PLX sing 331 n n 
N1 C1C PLX sing 332 n n 
N1 C1B PLX sing 333 n n 
N1 C1A PLX sing 334 n n 
C1C H1C1 PLX sing 335 n n 
C1C H1C2 PLX sing 336 n n 
C1C H1C3 PLX sing 337 n n 
C1B H1B1 PLX sing 338 n n 
C1B H1B2 PLX sing 339 n n 
C1B H1B3 PLX sing 340 n n 
C1A H1A1 PLX sing 341 n n 
C1A H1A2 PLX sing 342 n n 
C1A H1A3 PLX sing 343 n n 
C5 O8 PLX sing 344 n n 
C5 H51 PLX sing 345 n n 
C5 H52 PLX sing 346 n n 
O8 C24 PLX sing 347 n n 
C24 O9 PLX sing 348 n n 
C24 C25 PLX sing 349 n n 
C24 H24 PLX sing 350 n n 
O9 HO9 PLX sing 351 n n 
C25 C26 PLX sing 352 n n 
C25 H251 PLX sing 353 n n 
C25 H252 PLX sing 354 n n 
C26 C27 PLX sing 355 n n 
C26 H261 PLX sing 356 n n 
C26 H262 PLX sing 357 n n 
C27 C28 PLX sing 358 n n 
C27 H271 PLX sing 359 n n 
C27 H272 PLX sing 360 n n 
C28 C29 PLX sing 361 n n 
C28 H281 PLX sing 362 n n 
C28 H282 PLX sing 363 n n 
C29 C30 PLX sing 364 n n 
C29 H291 PLX sing 365 n n 
C29 H292 PLX sing 366 n n 
C30 C31 PLX sing 367 n n 
C30 H301 PLX sing 368 n n 
C30 H302 PLX sing 369 n n 
C31 C32 PLX sing 370 n n 
C31 H311 PLX sing 371 n n 
C31 H312 PLX sing 372 n n 
C32 C33 PLX sing 373 n n 
C32 H321 PLX sing 374 n n 
C32 H322 PLX sing 375 n n 
C33 C34 PLX sing 376 n n 
C33 H331 PLX sing 377 n n 
C33 H332 PLX sing 378 n n 
C34 C35 PLX sing 379 n n 
C34 H341 PLX sing 380 n n 
C34 H342 PLX sing 381 n n 
C35 C36 PLX sing 382 n n 
C35 H351 PLX sing 383 n n 
C35 H352 PLX sing 384 n n 
C36 C37 PLX sing 385 n n 
C36 H361 PLX sing 386 n n 
C36 H362 PLX sing 387 n n 
C37 C38 PLX sing 388 n n 
C37 H371 PLX sing 389 n n 
C37 H372 PLX sing 390 n n 
C38 C39 PLX sing 391 n n 
C38 H381 PLX sing 392 n n 
C38 H382 PLX sing 393 n n 
C39 H391 PLX sing 394 n n 
C39 H392 PLX sing 395 n n 
C39 H393 PLX sing 396 n n 
O3 HO3 PLX sing 397 n n 
#
_atom_sites.entry_id                     7WLU 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PLX A 1 2601 1 PLX PLX . 
E 2 PLX C 1 2601 1 PLX PLX . 
F 2 PLX E 1 2601 1 PLX PLX . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C23 PLX . . . D 2 210.065 181.551 216.723 1 71.78 ? C23 PLX 2601 A 1 
HETATM 2 C C22 PLX . . . D 2 210.274 182.429 215.481 1 71.78 ? C22 PLX 2601 A 1 
HETATM 3 C C21 PLX . . . D 2 210.126 181.566 214.21 1 71.78 ? C21 PLX 2601 A 1 
HETATM 4 C C20 PLX . . . D 2 210.374 182.439 212.958 1 71.78 ? C20 PLX 2601 A 1 
HETATM 5 C C19 PLX . . . D 2 209.315 183.579 212.917 1 71.78 ? C19 PLX 2601 A 1 
HETATM 6 C C18 PLX . . . D 2 209.607 184.544 211.736 1 71.78 ? C18 PLX 2601 A 1 
HETATM 7 C C17 PLX . . . D 2 209.469 183.785 210.391 1 71.78 ? C17 PLX 2601 A 1 
HETATM 8 C C16 PLX . . . D 2 210.138 184.622 209.256 1 71.78 ? C16 PLX 2601 A 1 
HETATM 9 C C15 PLX . . . D 2 209.947 183.894 207.89 1 71.78 ? C15 PLX 2601 A 1 
HETATM 10 C C14 PLX . . . D 2 210.926 184.503 206.829 1 71.78 ? C14 PLX 2601 A 1 
HETATM 11 C C13 PLX . . . D 2 210.733 183.747 205.46 1 71.78 ? C13 PLX 2601 A 1 
HETATM 12 C C12 PLX . . . D 2 211.971 183.988 204.536 1 71.78 ? C12 PLX 2601 A 1 
HETATM 13 C C11 PLX . . . D 2 211.808 183.111 203.25 1 71.78 ? C11 PLX 2601 A 1 
HETATM 14 C C10 PLX . . . D 2 213.147 183.069 202.44 1 71.78 ? C10 PLX 2601 A 1 
HETATM 15 C C9 PLX . . . D 2 212.907 182.173 201.183 1 71.78 ? C9 PLX 2601 A 1 
HETATM 16 C C8 PLX . . . D 2 214.231 182.011 200.344 1 71.78 ? C8 PLX 2601 A 1 
HETATM 17 C C7 PLX . . . D 2 213.873 181.132 199.096 1 71.78 ? C7 PLX 2601 A 1 
HETATM 18 C C6 PLX . . . D 2 215.126 180.921 198.199 1 71.78 ? C6 PLX 2601 A 1 
HETATM 19 O O7 PLX . . . D 2 215.983 180.044 198.82 1 71.78 ? O7 PLX 2601 A 1 
HETATM 20 O O6 PLX . . . D 2 214.708 180.398 196.948 1 71.78 ? O6 PLX 2601 A 1 
HETATM 21 C C4 PLX . . . D 2 214.682 181.336 195.9 1 71.78 ? C4 PLX 2601 A 1 
HETATM 22 C C3 PLX . . . D 2 215.029 180.622 194.589 1 71.78 ? C3 PLX 2601 A 1 
HETATM 23 O O4 PLX . . . D 2 214.813 179.22 194.757 1 71.78 ? O4 PLX 2601 A 1 
HETATM 24 P P1 PLX . . . D 2 215.59 178.137 193.726 1 71.78 ? P1 PLX 2601 A 1 
HETATM 25 O O1 PLX . . . D 2 215.974 176.786 194.625 1 71.78 ? O1 PLX 2601 A 1 
HETATM 26 C C2 PLX . . . D 2 217.329 176.674 195.077 1 71.78 ? C2 PLX 2601 A 1 
HETATM 27 C C1 PLX . . . D 2 217.428 175.854 196.397 1 71.78 ? C1 PLX 2601 A 1 
HETATM 28 N N1 PLX . . . D 2 217.064 176.65 197.585 1 71.78 ? N1 PLX 2601 A 1 
HETATM 29 C C1C PLX . . . D 2 215.696 177.119 197.556 1 71.78 ? C1C PLX 2601 A 1 
HETATM 30 C C1B PLX . . . D 2 217.256 175.84 198.774 1 71.78 ? C1B PLX 2601 A 1 
HETATM 31 C C1A PLX . . . D 2 217.956 177.813 197.655 1 71.78 ? C1A PLX 2601 A 1 
HETATM 32 O O2 PLX . . . D 2 216.857 178.75 193.187 1 71.78 ? O2 PLX 2601 A 1 
HETATM 33 C C5 PLX . . . D 2 213.279 181.961 195.764 1 71.78 ? C5 PLX 2601 A 1 
HETATM 34 O O8 PLX . . . D 2 213.105 183.031 196.712 1 71.78 ? O8 PLX 2601 A 1 
HETATM 35 C C24 PLX . . . D 2 213.148 184.323 196.129 1 71.78 ? C24 PLX 2601 A 1 
HETATM 36 O O9 PLX . . . D 2 214.461 184.674 195.908 1 71.78 ? O9 PLX 2601 A 1 
HETATM 37 C C25 PLX . . . D 2 212.476 185.372 197.047 1 71.78 ? C25 PLX 2601 A 1 
HETATM 38 C C26 PLX . . . D 2 211.344 186.084 196.216 1 71.78 ? C26 PLX 2601 A 1 
HETATM 39 C C27 PLX . . . D 2 210.528 187.139 197.049 1 71.78 ? C27 PLX 2601 A 1 
HETATM 40 C C28 PLX . . . D 2 209.481 187.743 196.048 1 71.78 ? C28 PLX 2601 A 1 
HETATM 41 C C29 PLX . . . D 2 208.302 188.52 196.729 1 71.78 ? C29 PLX 2601 A 1 
HETATM 42 C C30 PLX . . . D 2 208.768 189.796 197.516 1 71.78 ? C30 PLX 2601 A 1 
HETATM 43 C C31 PLX . . . D 2 207.701 190.132 198.606 1 71.78 ? C31 PLX 2601 A 1 
HETATM 44 C C32 PLX . . . D 2 207.709 191.682 198.846 1 71.78 ? C32 PLX 2601 A 1 
HETATM 45 C C33 PLX . . . D 2 208.981 192.124 199.646 1 71.78 ? C33 PLX 2601 A 1 
HETATM 46 C C34 PLX . . . D 2 209.182 191.246 200.919 1 71.78 ? C34 PLX 2601 A 1 
HETATM 47 C C35 PLX . . . D 2 208.151 191.703 201.984 1 71.78 ? C35 PLX 2601 A 1 
HETATM 48 C C36 PLX . . . D 2 208.221 190.788 203.225 1 71.78 ? C36 PLX 2601 A 1 
HETATM 49 C C37 PLX . . . D 2 207.075 191.152 204.18 1 71.78 ? C37 PLX 2601 A 1 
HETATM 50 C C38 PLX . . . D 2 207.062 190.165 205.365 1 71.78 ? C38 PLX 2601 A 1 
HETATM 51 C C39 PLX . . . D 2 208.404 190.246 206.101 1 71.78 ? C39 PLX 2601 A 1 
HETATM 52 O O3 PLX . . . D 2 214.678 177.755 192.584 1 71.78 ? O3 PLX 2601 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           52 
#