data_7WMQ
#
_model_server_result.job_id            z-nbTzkYxb20gSeuBGABvA 
_model_server_result.datetime_utc      '2024-11-18 09:38:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wmq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":503}' 
#
_entry.id    7WMQ 
#
_exptl.entry_id    7WMQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WMQ 
_cell.length_a            90.08 
_cell.length_b            95.08 
_cell.length_c            110.4 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WMQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 M N N 
? 3 N N N 
? 3 T N N 
? 3 Z N N 
? 3 AA N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 133 n n 
C1 C2 GOL sing 134 n n 
C1 H11 GOL sing 135 n n 
C1 H12 GOL sing 136 n n 
O1 HO1 GOL sing 137 n n 
C2 O2 GOL sing 138 n n 
C2 C3 GOL sing 139 n n 
C2 H2 GOL sing 140 n n 
O2 HO2 GOL sing 141 n n 
C3 O3 GOL sing 142 n n 
C3 H31 GOL sing 143 n n 
C3 H32 GOL sing 144 n n 
O3 HO3 GOL sing 145 n n 
#
_atom_sites.entry_id                     7WMQ 
_atom_sites.fract_transf_matrix[1][1]    0.011101 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010517 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009058 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 JFL A 1 501 3 JFL JFL . 
F 3 GOL A 1 502 3 GOL GOL . 
G 4 FMT A 1 503 1 FMT FMT . 
H 4 FMT A 1 504 3 FMT FMT . 
I 4 FMT A 1 505 5 FMT FMT . 
J 4 FMT A 1 506 7 FMT FMT . 
K 4 FMT A 1 507 13 FMT FMT . 
L 2 JFL B 1 501 2 JFL JFL . 
M 3 GOL B 1 502 2 GOL GOL . 
N 3 GOL B 1 503 4 GOL GOL . 
O 4 FMT B 1 504 4 FMT FMT . 
P 4 FMT B 1 505 6 FMT FMT . 
Q 4 FMT B 1 506 12 FMT FMT . 
R 4 FMT B 1 507 15 FMT FMT . 
S 2 JFL C 1 501 4 JFL JFL . 
T 3 GOL C 1 502 5 GOL GOL . 
U 4 FMT C 1 503 2 FMT FMT . 
V 4 FMT C 1 504 8 FMT FMT . 
W 4 FMT C 1 505 9 FMT FMT . 
X 4 FMT C 1 506 11 FMT FMT . 
Y 2 JFL D 1 501 1 JFL JFL . 
Z 3 GOL D 1 502 1 GOL GOL . 
AA 3 GOL D 1 503 7 GOL GOL . 
BA 4 FMT D 1 504 10 FMT FMT . 
CA 4 FMT D 1 505 14 FMT FMT . 
DA 5 HOH A 1 601 205 HOH HOH . 
DA 5 HOH A 2 602 104 HOH HOH . 
DA 5 HOH A 3 603 1 HOH HOH . 
DA 5 HOH A 4 604 128 HOH HOH . 
DA 5 HOH A 5 605 135 HOH HOH . 
DA 5 HOH A 6 606 15 HOH HOH . 
DA 5 HOH A 7 607 57 HOH HOH . 
DA 5 HOH A 8 608 127 HOH HOH . 
DA 5 HOH A 9 609 68 HOH HOH . 
DA 5 HOH A 10 610 148 HOH HOH . 
DA 5 HOH A 11 611 14 HOH HOH . 
DA 5 HOH A 12 612 70 HOH HOH . 
DA 5 HOH A 13 613 37 HOH HOH . 
DA 5 HOH A 14 614 106 HOH HOH . 
DA 5 HOH A 15 615 58 HOH HOH . 
DA 5 HOH A 16 616 29 HOH HOH . 
DA 5 HOH A 17 617 40 HOH HOH . 
DA 5 HOH A 18 618 100 HOH HOH . 
DA 5 HOH A 19 619 105 HOH HOH . 
DA 5 HOH A 20 620 56 HOH HOH . 
DA 5 HOH A 21 621 150 HOH HOH . 
DA 5 HOH A 22 622 69 HOH HOH . 
DA 5 HOH A 23 623 139 HOH HOH . 
DA 5 HOH A 24 624 137 HOH HOH . 
DA 5 HOH A 25 625 151 HOH HOH . 
DA 5 HOH A 26 626 55 HOH HOH . 
DA 5 HOH A 27 627 73 HOH HOH . 
DA 5 HOH A 28 628 16 HOH HOH . 
DA 5 HOH A 29 629 32 HOH HOH . 
DA 5 HOH A 30 630 26 HOH HOH . 
DA 5 HOH A 31 631 59 HOH HOH . 
DA 5 HOH A 32 632 61 HOH HOH . 
DA 5 HOH A 33 633 144 HOH HOH . 
DA 5 HOH A 34 634 133 HOH HOH . 
DA 5 HOH A 35 635 60 HOH HOH . 
DA 5 HOH A 36 636 212 HOH HOH . 
DA 5 HOH A 37 637 99 HOH HOH . 
DA 5 HOH A 38 638 145 HOH HOH . 
DA 5 HOH A 39 639 86 HOH HOH . 
DA 5 HOH A 40 640 147 HOH HOH . 
DA 5 HOH A 41 641 76 HOH HOH . 
DA 5 HOH A 42 642 141 HOH HOH . 
DA 5 HOH A 43 643 146 HOH HOH . 
DA 5 HOH A 44 644 140 HOH HOH . 
DA 5 HOH A 45 645 131 HOH HOH . 
DA 5 HOH A 46 646 80 HOH HOH . 
DA 5 HOH A 47 647 211 HOH HOH . 
DA 5 HOH A 48 648 82 HOH HOH . 
DA 5 HOH A 49 649 130 HOH HOH . 
DA 5 HOH A 50 650 149 HOH HOH . 
DA 5 HOH A 51 651 136 HOH HOH . 
DA 5 HOH A 52 652 134 HOH HOH . 
DA 5 HOH A 53 653 142 HOH HOH . 
EA 5 HOH B 1 601 203 HOH HOH . 
EA 5 HOH B 2 602 87 HOH HOH . 
EA 5 HOH B 3 603 155 HOH HOH . 
EA 5 HOH B 4 604 85 HOH HOH . 
EA 5 HOH B 5 605 10 HOH HOH . 
EA 5 HOH B 6 606 111 HOH HOH . 
EA 5 HOH B 7 607 84 HOH HOH . 
EA 5 HOH B 8 608 5 HOH HOH . 
EA 5 HOH B 9 609 4 HOH HOH . 
EA 5 HOH B 10 610 53 HOH HOH . 
EA 5 HOH B 11 611 214 HOH HOH . 
EA 5 HOH B 12 612 52 HOH HOH . 
EA 5 HOH B 13 613 114 HOH HOH . 
EA 5 HOH B 14 614 88 HOH HOH . 
EA 5 HOH B 15 615 30 HOH HOH . 
EA 5 HOH B 16 616 168 HOH HOH . 
EA 5 HOH B 17 617 162 HOH HOH . 
EA 5 HOH B 18 618 116 HOH HOH . 
EA 5 HOH B 19 619 89 HOH HOH . 
EA 5 HOH B 20 620 67 HOH HOH . 
EA 5 HOH B 21 621 167 HOH HOH . 
EA 5 HOH B 22 622 97 HOH HOH . 
EA 5 HOH B 23 623 166 HOH HOH . 
EA 5 HOH B 24 624 36 HOH HOH . 
EA 5 HOH B 25 625 164 HOH HOH . 
EA 5 HOH B 26 626 109 HOH HOH . 
EA 5 HOH B 27 627 51 HOH HOH . 
EA 5 HOH B 28 628 208 HOH HOH . 
EA 5 HOH B 29 629 8 HOH HOH . 
EA 5 HOH B 30 630 152 HOH HOH . 
EA 5 HOH B 31 631 157 HOH HOH . 
EA 5 HOH B 32 632 98 HOH HOH . 
EA 5 HOH B 33 633 22 HOH HOH . 
EA 5 HOH B 34 634 83 HOH HOH . 
EA 5 HOH B 35 635 77 HOH HOH . 
EA 5 HOH B 36 636 23 HOH HOH . 
EA 5 HOH B 37 637 95 HOH HOH . 
EA 5 HOH B 38 638 143 HOH HOH . 
EA 5 HOH B 39 639 158 HOH HOH . 
EA 5 HOH B 40 640 169 HOH HOH . 
EA 5 HOH B 41 641 201 HOH HOH . 
EA 5 HOH B 42 642 20 HOH HOH . 
EA 5 HOH B 43 643 81 HOH HOH . 
EA 5 HOH B 44 644 165 HOH HOH . 
EA 5 HOH B 45 645 213 HOH HOH . 
EA 5 HOH B 46 646 96 HOH HOH . 
EA 5 HOH B 47 647 163 HOH HOH . 
EA 5 HOH B 48 648 161 HOH HOH . 
EA 5 HOH B 49 649 170 HOH HOH . 
EA 5 HOH B 50 650 154 HOH HOH . 
EA 5 HOH B 51 651 156 HOH HOH . 
EA 5 HOH B 52 652 79 HOH HOH . 
EA 5 HOH B 53 653 160 HOH HOH . 
EA 5 HOH B 54 654 33 HOH HOH . 
EA 5 HOH B 55 655 153 HOH HOH . 
EA 5 HOH B 56 656 210 HOH HOH . 
FA 5 HOH C 1 601 113 HOH HOH . 
FA 5 HOH C 2 602 178 HOH HOH . 
FA 5 HOH C 3 603 132 HOH HOH . 
FA 5 HOH C 4 604 2 HOH HOH . 
FA 5 HOH C 5 605 138 HOH HOH . 
FA 5 HOH C 6 606 181 HOH HOH . 
FA 5 HOH C 7 607 207 HOH HOH . 
FA 5 HOH C 8 608 120 HOH HOH . 
FA 5 HOH C 9 609 66 HOH HOH . 
FA 5 HOH C 10 610 123 HOH HOH . 
FA 5 HOH C 11 611 75 HOH HOH . 
FA 5 HOH C 12 612 74 HOH HOH . 
FA 5 HOH C 13 613 17 HOH HOH . 
FA 5 HOH C 14 614 41 HOH HOH . 
FA 5 HOH C 15 615 25 HOH HOH . 
FA 5 HOH C 16 616 38 HOH HOH . 
FA 5 HOH C 17 617 184 HOH HOH . 
FA 5 HOH C 18 618 102 HOH HOH . 
FA 5 HOH C 19 619 176 HOH HOH . 
FA 5 HOH C 20 620 174 HOH HOH . 
FA 5 HOH C 21 621 9 HOH HOH . 
FA 5 HOH C 22 622 78 HOH HOH . 
FA 5 HOH C 23 623 71 HOH HOH . 
FA 5 HOH C 24 624 171 HOH HOH . 
FA 5 HOH C 25 625 64 HOH HOH . 
FA 5 HOH C 26 626 39 HOH HOH . 
FA 5 HOH C 27 627 44 HOH HOH . 
FA 5 HOH C 28 628 129 HOH HOH . 
FA 5 HOH C 29 629 198 HOH HOH . 
FA 5 HOH C 30 630 182 HOH HOH . 
FA 5 HOH C 31 631 124 HOH HOH . 
FA 5 HOH C 32 632 101 HOH HOH . 
FA 5 HOH C 33 633 31 HOH HOH . 
FA 5 HOH C 34 634 63 HOH HOH . 
FA 5 HOH C 35 635 115 HOH HOH . 
FA 5 HOH C 36 636 6 HOH HOH . 
FA 5 HOH C 37 637 185 HOH HOH . 
FA 5 HOH C 38 638 125 HOH HOH . 
FA 5 HOH C 39 639 90 HOH HOH . 
FA 5 HOH C 40 640 62 HOH HOH . 
FA 5 HOH C 41 641 173 HOH HOH . 
FA 5 HOH C 42 642 183 HOH HOH . 
FA 5 HOH C 43 643 126 HOH HOH . 
FA 5 HOH C 44 644 177 HOH HOH . 
FA 5 HOH C 45 645 172 HOH HOH . 
FA 5 HOH C 46 646 72 HOH HOH . 
FA 5 HOH C 47 647 121 HOH HOH . 
FA 5 HOH C 48 648 119 HOH HOH . 
FA 5 HOH C 49 649 54 HOH HOH . 
FA 5 HOH C 50 650 199 HOH HOH . 
FA 5 HOH C 51 651 118 HOH HOH . 
FA 5 HOH C 52 652 209 HOH HOH . 
FA 5 HOH C 53 653 200 HOH HOH . 
FA 5 HOH C 54 654 159 HOH HOH . 
FA 5 HOH C 55 655 175 HOH HOH . 
GA 5 HOH D 1 601 186 HOH HOH . 
GA 5 HOH D 2 602 215 HOH HOH . 
GA 5 HOH D 3 603 110 HOH HOH . 
GA 5 HOH D 4 604 47 HOH HOH . 
GA 5 HOH D 5 605 13 HOH HOH . 
GA 5 HOH D 6 606 50 HOH HOH . 
GA 5 HOH D 7 607 21 HOH HOH . 
GA 5 HOH D 8 608 191 HOH HOH . 
GA 5 HOH D 9 609 3 HOH HOH . 
GA 5 HOH D 10 610 12 HOH HOH . 
GA 5 HOH D 11 611 204 HOH HOH . 
GA 5 HOH D 12 612 217 HOH HOH . 
GA 5 HOH D 13 613 107 HOH HOH . 
GA 5 HOH D 14 614 45 HOH HOH . 
GA 5 HOH D 15 615 19 HOH HOH . 
GA 5 HOH D 16 616 195 HOH HOH . 
GA 5 HOH D 17 617 27 HOH HOH . 
GA 5 HOH D 18 618 43 HOH HOH . 
GA 5 HOH D 19 619 48 HOH HOH . 
GA 5 HOH D 20 620 42 HOH HOH . 
GA 5 HOH D 21 621 94 HOH HOH . 
GA 5 HOH D 22 622 196 HOH HOH . 
GA 5 HOH D 23 623 46 HOH HOH . 
GA 5 HOH D 24 624 187 HOH HOH . 
GA 5 HOH D 25 625 193 HOH HOH . 
GA 5 HOH D 26 626 194 HOH HOH . 
GA 5 HOH D 27 627 35 HOH HOH . 
GA 5 HOH D 28 628 49 HOH HOH . 
GA 5 HOH D 29 629 112 HOH HOH . 
GA 5 HOH D 30 630 28 HOH HOH . 
GA 5 HOH D 31 631 188 HOH HOH . 
GA 5 HOH D 32 632 93 HOH HOH . 
GA 5 HOH D 33 633 202 HOH HOH . 
GA 5 HOH D 34 634 34 HOH HOH . 
GA 5 HOH D 35 635 189 HOH HOH . 
GA 5 HOH D 36 636 65 HOH HOH . 
GA 5 HOH D 37 637 197 HOH HOH . 
GA 5 HOH D 38 638 190 HOH HOH . 
GA 5 HOH D 39 639 192 HOH HOH . 
GA 5 HOH D 40 640 117 HOH HOH . 
GA 5 HOH D 41 641 206 HOH HOH . 
GA 5 HOH D 42 642 24 HOH HOH . 
GA 5 HOH D 43 643 92 HOH HOH . 
GA 5 HOH D 44 644 91 HOH HOH . 
GA 5 HOH D 45 645 216 HOH HOH . 
GA 5 HOH D 46 646 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 3 -15.746 -28.964 -24.052 1 74 ? C1 GOL 503 B 1 
HETATM 2 O O1 GOL . . . N 3 -15.882 -28.183 -25.255 1 74.24 ? O1 GOL 503 B 1 
HETATM 3 C C2 GOL . . . N 3 -17.084 -29.278 -23.365 1 73.28 ? C2 GOL 503 B 1 
HETATM 4 O O2 GOL . . . N 3 -17.768 -28.071 -22.989 1 75.18 ? O2 GOL 503 B 1 
HETATM 5 C C3 GOL . . . N 3 -16.865 -30.113 -22.104 1 69.95 ? C3 GOL 503 B 1 
HETATM 6 O O3 GOL . . . N 3 -18.085 -30.774 -21.748 1 65.25 ? O3 GOL 503 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#