data_7WNA # _model_server_result.job_id jI_ogB2tbIKBxEzAapt_Uw _model_server_result.datetime_utc '2024-11-13 09:16:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wna # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":502}' # _entry.id 7WNA # _exptl.entry_id 7WNA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WNA _cell.length_a 106.63 _cell.length_b 106.63 _cell.length_c 87.97 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WNA _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 K N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7WNA _atom_sites.fract_transf_matrix[1][1] 0.009378 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009378 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 JGR A 1 501 6 JGR JGR . H 3 EDO A 1 502 2 EDO EDO . I 4 PEG A 1 503 1 PEG PEG . J 2 JGR B 1 501 2 JGR JGR . K 3 EDO B 1 502 1 EDO EDO . L 2 JGR C 1 501 3 JGR JGR . M 2 JGR D 1 501 1 JGR JGR . N 4 PEG D 1 502 2 PEG PEG . O 2 JGR E 1 501 4 JGR JGR . P 2 JGR F 1 501 5 JGR JGR . Q 5 HOH A 1 601 49 HOH HOH . Q 5 HOH A 2 602 28 HOH HOH . Q 5 HOH A 3 603 42 HOH HOH . Q 5 HOH A 4 604 39 HOH HOH . Q 5 HOH A 5 605 35 HOH HOH . Q 5 HOH A 6 606 25 HOH HOH . Q 5 HOH A 7 607 3 HOH HOH . Q 5 HOH A 8 608 16 HOH HOH . Q 5 HOH A 9 609 31 HOH HOH . Q 5 HOH A 10 610 38 HOH HOH . Q 5 HOH A 11 611 17 HOH HOH . Q 5 HOH A 12 612 15 HOH HOH . Q 5 HOH A 13 613 37 HOH HOH . Q 5 HOH A 14 614 62 HOH HOH . Q 5 HOH A 15 615 20 HOH HOH . Q 5 HOH A 16 616 26 HOH HOH . Q 5 HOH A 17 617 24 HOH HOH . Q 5 HOH A 18 618 36 HOH HOH . Q 5 HOH A 19 619 4 HOH HOH . R 5 HOH B 1 601 29 HOH HOH . R 5 HOH B 2 602 9 HOH HOH . R 5 HOH B 3 603 8 HOH HOH . R 5 HOH B 4 604 57 HOH HOH . R 5 HOH B 5 605 22 HOH HOH . R 5 HOH B 6 606 27 HOH HOH . S 5 HOH C 1 601 1 HOH HOH . S 5 HOH C 2 602 5 HOH HOH . S 5 HOH C 3 603 32 HOH HOH . S 5 HOH C 4 604 59 HOH HOH . S 5 HOH C 5 605 2 HOH HOH . S 5 HOH C 6 606 40 HOH HOH . S 5 HOH C 7 607 58 HOH HOH . S 5 HOH C 8 608 47 HOH HOH . T 5 HOH D 1 601 51 HOH HOH . T 5 HOH D 2 602 23 HOH HOH . T 5 HOH D 3 603 48 HOH HOH . T 5 HOH D 4 604 34 HOH HOH . T 5 HOH D 5 605 43 HOH HOH . T 5 HOH D 6 606 33 HOH HOH . T 5 HOH D 7 607 50 HOH HOH . T 5 HOH D 8 608 44 HOH HOH . T 5 HOH D 9 609 7 HOH HOH . T 5 HOH D 10 610 6 HOH HOH . T 5 HOH D 11 611 56 HOH HOH . T 5 HOH D 12 612 55 HOH HOH . T 5 HOH D 13 613 41 HOH HOH . T 5 HOH D 14 614 45 HOH HOH . T 5 HOH D 15 615 46 HOH HOH . U 5 HOH E 1 601 12 HOH HOH . U 5 HOH E 2 602 11 HOH HOH . U 5 HOH E 3 603 53 HOH HOH . U 5 HOH E 4 604 13 HOH HOH . U 5 HOH E 5 605 52 HOH HOH . U 5 HOH E 6 606 10 HOH HOH . U 5 HOH E 7 607 60 HOH HOH . U 5 HOH E 8 608 30 HOH HOH . V 5 HOH F 1 601 14 HOH HOH . V 5 HOH F 2 602 61 HOH HOH . V 5 HOH F 3 603 54 HOH HOH . V 5 HOH F 4 604 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . K 3 -18.976 28.594 -8.264 1 63.02 ? C1 EDO 502 B 1 HETATM 2 O O1 EDO . . . K 3 -19.986 28.477 -9.285 1 59.84 ? O1 EDO 502 B 1 HETATM 3 C C2 EDO . . . K 3 -19.408 27.862 -7.001 1 62.57 ? C2 EDO 502 B 1 HETATM 4 O O2 EDO . . . K 3 -20.415 28.648 -6.383 1 60.72 ? O2 EDO 502 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #