data_7WNB # _model_server_result.job_id CgiTPgC7jnhTjLh4-JxEoQ _model_server_result.datetime_utc '2024-11-16 10:27:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wnb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 7WNB # _exptl.entry_id 7WNB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WNB _cell.length_a 87.297 _cell.length_b 102.943 _cell.length_c 114.341 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 B 1 NAG B 1 NAG 4 n D NAG 2 B 2 NAG B 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 16 R CYS 336 1_555 A SG CYS 41 R CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 59 R CYS 379 1_555 A SG CYS 112 R CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf3 A SG CYS 71 R CYS 391 1_555 A SG CYS 205 R CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 160 R CYS 480 1_555 A SG CYS 168 R CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? disulf ? disulf5 B SG CYS 23 L CYS 25 1_555 B SG CYS 88 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? disulf ? disulf6 B SG CYS 135 L CYS 137 1_555 B SG CYS 195 L CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf7 C SG CYS 22 H CYS 22 1_555 C SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf8 C SG CYS 144 H CYS 144 1_555 C SG CYS 200 H CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? covale ? covale1 A ND2 ASN 23 R ASN 343 1_555 D C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale2 D O4 NAG . B NAG 1 1_555 D C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 320 n n S O2 SO4 doub 321 n n S O3 SO4 sing 322 n n S O4 SO4 sing 323 n n # _atom_sites.entry_id 7WNB _atom_sites.fract_transf_matrix[1][1] 0.011455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 SO4 L 1 301 1 SO4 SO4 . F 6 HOH R 1 601 94 HOH HOH . F 6 HOH R 2 602 59 HOH HOH . F 6 HOH R 3 603 28 HOH HOH . F 6 HOH R 4 604 45 HOH HOH . F 6 HOH R 5 605 79 HOH HOH . F 6 HOH R 6 606 15 HOH HOH . F 6 HOH R 7 607 5 HOH HOH . F 6 HOH R 8 608 177 HOH HOH . F 6 HOH R 9 609 95 HOH HOH . F 6 HOH R 10 610 112 HOH HOH . F 6 HOH R 11 611 37 HOH HOH . F 6 HOH R 12 612 67 HOH HOH . F 6 HOH R 13 613 114 HOH HOH . F 6 HOH R 14 614 6 HOH HOH . F 6 HOH R 15 615 2 HOH HOH . F 6 HOH R 16 616 24 HOH HOH . F 6 HOH R 17 617 22 HOH HOH . F 6 HOH R 18 618 88 HOH HOH . F 6 HOH R 19 619 33 HOH HOH . F 6 HOH R 20 620 32 HOH HOH . F 6 HOH R 21 621 118 HOH HOH . F 6 HOH R 22 622 4 HOH HOH . F 6 HOH R 23 623 131 HOH HOH . F 6 HOH R 24 624 113 HOH HOH . F 6 HOH R 25 625 182 HOH HOH . F 6 HOH R 26 626 185 HOH HOH . F 6 HOH R 27 627 68 HOH HOH . F 6 HOH R 28 628 8 HOH HOH . F 6 HOH R 29 629 86 HOH HOH . F 6 HOH R 30 630 140 HOH HOH . F 6 HOH R 31 631 102 HOH HOH . F 6 HOH R 32 632 106 HOH HOH . G 6 HOH L 1 401 62 HOH HOH . G 6 HOH L 2 402 115 HOH HOH . G 6 HOH L 3 403 141 HOH HOH . G 6 HOH L 4 404 171 HOH HOH . G 6 HOH L 5 405 39 HOH HOH . G 6 HOH L 6 406 84 HOH HOH . G 6 HOH L 7 407 126 HOH HOH . G 6 HOH L 8 408 162 HOH HOH . G 6 HOH L 9 409 93 HOH HOH . G 6 HOH L 10 410 66 HOH HOH . G 6 HOH L 11 411 109 HOH HOH . G 6 HOH L 12 412 43 HOH HOH . G 6 HOH L 13 413 98 HOH HOH . G 6 HOH L 14 414 159 HOH HOH . G 6 HOH L 15 415 90 HOH HOH . G 6 HOH L 16 416 146 HOH HOH . G 6 HOH L 17 417 1 HOH HOH . G 6 HOH L 18 418 135 HOH HOH . G 6 HOH L 19 419 89 HOH HOH . G 6 HOH L 20 420 191 HOH HOH . G 6 HOH L 21 421 150 HOH HOH . G 6 HOH L 22 422 26 HOH HOH . G 6 HOH L 23 423 178 HOH HOH . G 6 HOH L 24 424 188 HOH HOH . G 6 HOH L 25 425 122 HOH HOH . G 6 HOH L 26 426 187 HOH HOH . G 6 HOH L 27 427 11 HOH HOH . G 6 HOH L 28 428 10 HOH HOH . G 6 HOH L 29 429 25 HOH HOH . G 6 HOH L 30 430 30 HOH HOH . G 6 HOH L 31 431 100 HOH HOH . G 6 HOH L 32 432 41 HOH HOH . G 6 HOH L 33 433 48 HOH HOH . G 6 HOH L 34 434 83 HOH HOH . G 6 HOH L 35 435 60 HOH HOH . G 6 HOH L 36 436 103 HOH HOH . G 6 HOH L 37 437 19 HOH HOH . G 6 HOH L 38 438 9 HOH HOH . G 6 HOH L 39 439 21 HOH HOH . G 6 HOH L 40 440 101 HOH HOH . G 6 HOH L 41 441 87 HOH HOH . G 6 HOH L 42 442 54 HOH HOH . G 6 HOH L 43 443 170 HOH HOH . G 6 HOH L 44 444 133 HOH HOH . G 6 HOH L 45 445 50 HOH HOH . G 6 HOH L 46 446 27 HOH HOH . G 6 HOH L 47 447 99 HOH HOH . G 6 HOH L 48 448 124 HOH HOH . G 6 HOH L 49 449 16 HOH HOH . G 6 HOH L 50 450 104 HOH HOH . G 6 HOH L 51 451 53 HOH HOH . G 6 HOH L 52 452 189 HOH HOH . G 6 HOH L 53 453 42 HOH HOH . G 6 HOH L 54 454 183 HOH HOH . G 6 HOH L 55 455 13 HOH HOH . G 6 HOH L 56 456 119 HOH HOH . G 6 HOH L 57 457 58 HOH HOH . G 6 HOH L 58 458 92 HOH HOH . G 6 HOH L 59 459 149 HOH HOH . G 6 HOH L 60 460 186 HOH HOH . G 6 HOH L 61 461 165 HOH HOH . G 6 HOH L 62 462 7 HOH HOH . G 6 HOH L 63 463 14 HOH HOH . G 6 HOH L 64 464 107 HOH HOH . G 6 HOH L 65 465 110 HOH HOH . G 6 HOH L 66 466 82 HOH HOH . G 6 HOH L 67 467 157 HOH HOH . G 6 HOH L 68 468 192 HOH HOH . G 6 HOH L 69 469 172 HOH HOH . G 6 HOH L 70 470 134 HOH HOH . G 6 HOH L 71 471 63 HOH HOH . G 6 HOH L 72 472 91 HOH HOH . G 6 HOH L 73 473 120 HOH HOH . G 6 HOH L 74 474 179 HOH HOH . G 6 HOH L 75 475 158 HOH HOH . G 6 HOH L 76 476 121 HOH HOH . G 6 HOH L 77 477 123 HOH HOH . G 6 HOH L 78 478 143 HOH HOH . G 6 HOH L 79 479 169 HOH HOH . G 6 HOH L 80 480 128 HOH HOH . G 6 HOH L 81 481 151 HOH HOH . H 6 HOH H 1 301 174 HOH HOH . H 6 HOH H 2 302 31 HOH HOH . H 6 HOH H 3 303 17 HOH HOH . H 6 HOH H 4 304 76 HOH HOH . H 6 HOH H 5 305 147 HOH HOH . H 6 HOH H 6 306 105 HOH HOH . H 6 HOH H 7 307 163 HOH HOH . H 6 HOH H 8 308 85 HOH HOH . H 6 HOH H 9 309 61 HOH HOH . H 6 HOH H 10 310 97 HOH HOH . H 6 HOH H 11 311 51 HOH HOH . H 6 HOH H 12 312 73 HOH HOH . H 6 HOH H 13 313 74 HOH HOH . H 6 HOH H 14 314 12 HOH HOH . H 6 HOH H 15 315 139 HOH HOH . H 6 HOH H 16 316 52 HOH HOH . H 6 HOH H 17 317 49 HOH HOH . H 6 HOH H 18 318 80 HOH HOH . H 6 HOH H 19 319 127 HOH HOH . H 6 HOH H 20 320 81 HOH HOH . H 6 HOH H 21 321 167 HOH HOH . H 6 HOH H 22 322 72 HOH HOH . H 6 HOH H 23 323 155 HOH HOH . H 6 HOH H 24 324 47 HOH HOH . H 6 HOH H 25 325 144 HOH HOH . H 6 HOH H 26 326 3 HOH HOH . H 6 HOH H 27 327 34 HOH HOH . H 6 HOH H 28 328 138 HOH HOH . H 6 HOH H 29 329 18 HOH HOH . H 6 HOH H 30 330 137 HOH HOH . H 6 HOH H 31 331 57 HOH HOH . H 6 HOH H 32 332 56 HOH HOH . H 6 HOH H 33 333 176 HOH HOH . H 6 HOH H 34 334 23 HOH HOH . H 6 HOH H 35 335 38 HOH HOH . H 6 HOH H 36 336 75 HOH HOH . H 6 HOH H 37 337 108 HOH HOH . H 6 HOH H 38 338 46 HOH HOH . H 6 HOH H 39 339 29 HOH HOH . H 6 HOH H 40 340 168 HOH HOH . H 6 HOH H 41 341 65 HOH HOH . H 6 HOH H 42 342 69 HOH HOH . H 6 HOH H 43 343 160 HOH HOH . H 6 HOH H 44 344 164 HOH HOH . H 6 HOH H 45 345 55 HOH HOH . H 6 HOH H 46 346 117 HOH HOH . H 6 HOH H 47 347 161 HOH HOH . H 6 HOH H 48 348 180 HOH HOH . H 6 HOH H 49 349 77 HOH HOH . H 6 HOH H 50 350 153 HOH HOH . H 6 HOH H 51 351 181 HOH HOH . H 6 HOH H 52 352 166 HOH HOH . H 6 HOH H 53 353 142 HOH HOH . H 6 HOH H 54 354 136 HOH HOH . H 6 HOH H 55 355 125 HOH HOH . H 6 HOH H 56 356 35 HOH HOH . H 6 HOH H 57 357 111 HOH HOH . H 6 HOH H 58 358 190 HOH HOH . H 6 HOH H 59 359 116 HOH HOH . H 6 HOH H 60 360 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 5 10.787 11.619 -11.115 1 72.33 ? S SO4 301 L 1 HETATM 2 O O1 SO4 . . . E 5 12.056 12.132 -11.634 1 65.88 ? O1 SO4 301 L 1 HETATM 3 O O2 SO4 . . . E 5 10.052 10.991 -12.217 1 53.84 ? O2 SO4 301 L 1 HETATM 4 O O3 SO4 . . . E 5 11.031 10.632 -10.053 1 58.17 ? O3 SO4 301 L 1 HETATM 5 O O4 SO4 . . . E 5 10.015 12.736 -10.561 1 70.13 ? O4 SO4 301 L 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 5 #