data_7WPI
#
_model_server_result.job_id            yOxADYgeX8VPrq-2MvP1Nw 
_model_server_result.datetime_utc      '2024-11-28 04:53:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wpi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    7WPI 
#
_exptl.entry_id    7WPI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              715.633 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(4-bromanyl-3-oxidanyl-phenyl)-1-[(1R)-2-[2-(2-tert-butylphenoxy)ethanoylamino]-1-(3,4-dimethoxyphenyl)ethyl]-N-methyl-benzimidazole-5-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WPI 
_cell.length_a            64.492 
_cell.length_b            80.331 
_cell.length_c            117.961 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WPI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C37 H39 Br N4 O6' 
_chem_comp.formula_weight    715.633 
_chem_comp.id                1V7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(4-bromanyl-3-oxidanyl-phenyl)-1-[(1R)-2-[2-(2-tert-butylphenoxy)ethanoylamino]-1-(3,4-dimethoxyphenyl)ethyl]-N-methyl-benzimidazole-5-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C 1V7 doub 1 n n 
C1 N 1V7 sing 2 n n 
C N 1V7 sing 3 n n 
C C2 1V7 sing 4 n n 
C2 C3 1V7 doub 5 n y 
C2 C36 1V7 sing 6 n y 
C3 C4 1V7 sing 7 n y 
C36 C6 1V7 doub 8 n y 
C4 C5 1V7 doub 9 n y 
C6 C5 1V7 sing 10 n y 
C6 N1 1V7 sing 11 n y 
C5 N2 1V7 sing 12 n y 
O3 C16 1V7 doub 13 n n 
C15 N3 1V7 sing 14 n n 
C15 C14 1V7 sing 15 n n 
N1 C7 1V7 doub 16 n y 
C31 O4 1V7 sing 17 n n 
C16 N3 1V7 sing 18 n n 
C16 C17 1V7 sing 19 n n 
N2 C7 1V7 sing 20 n y 
N2 C14 1V7 sing 21 n n 
C7 C8 1V7 sing 22 n n 
C14 C28 1V7 sing 23 n n 
C17 O2 1V7 sing 24 n n 
C29 C28 1V7 doub 25 n y 
C29 C30 1V7 sing 26 n y 
O4 C30 1V7 sing 27 n n 
C28 C35 1V7 sing 28 n y 
C30 C32 1V7 doub 29 n y 
O2 C18 1V7 sing 30 n n 
C8 C9 1V7 doub 31 n y 
C8 C13 1V7 sing 32 n y 
C27 C18 1V7 doub 33 n y 
C27 C26 1V7 sing 34 n y 
C35 C34 1V7 doub 35 n y 
C9 C10 1V7 sing 36 n y 
C32 C34 1V7 sing 37 n y 
C32 O5 1V7 sing 38 n n 
C18 C19 1V7 sing 39 n y 
O5 C33 1V7 sing 40 n n 
C21 C20 1V7 sing 41 n n 
C26 C25 1V7 doub 42 n y 
C13 C12 1V7 doub 43 n y 
C10 O1 1V7 sing 44 n n 
C10 C11 1V7 doub 45 n y 
C19 C20 1V7 sing 46 n n 
C19 C24 1V7 doub 47 n y 
C23 C20 1V7 sing 48 n n 
C20 C22 1V7 sing 49 n n 
C12 C11 1V7 sing 50 n y 
C25 C24 1V7 sing 51 n y 
C11 BR 1V7 sing 52 n n 
C1 H1 1V7 sing 53 n n 
C1 H2 1V7 sing 54 n n 
C1 H3 1V7 sing 55 n n 
O1 H4 1V7 sing 56 n n 
C17 H5 1V7 sing 57 n n 
C17 H6 1V7 sing 58 n n 
C27 H7 1V7 sing 59 n n 
C26 H8 1V7 sing 60 n n 
C25 H9 1V7 sing 61 n n 
C24 H10 1V7 sing 62 n n 
C23 H11 1V7 sing 63 n n 
C23 H12 1V7 sing 64 n n 
C23 H13 1V7 sing 65 n n 
C22 H14 1V7 sing 66 n n 
C22 H15 1V7 sing 67 n n 
C22 H16 1V7 sing 68 n n 
C21 H17 1V7 sing 69 n n 
C21 H18 1V7 sing 70 n n 
C21 H19 1V7 sing 71 n n 
N3 H20 1V7 sing 72 n n 
C15 H21 1V7 sing 73 n n 
C15 H22 1V7 sing 74 n n 
C14 H23 1V7 sing 75 n n 
C35 H24 1V7 sing 76 n n 
C34 H25 1V7 sing 77 n n 
C33 H26 1V7 sing 78 n n 
C33 H27 1V7 sing 79 n n 
C33 H28 1V7 sing 80 n n 
C31 H29 1V7 sing 81 n n 
C31 H30 1V7 sing 82 n n 
C31 H31 1V7 sing 83 n n 
C29 H32 1V7 sing 84 n n 
C4 H33 1V7 sing 85 n n 
C3 H34 1V7 sing 86 n n 
C13 H35 1V7 sing 87 n n 
C12 H36 1V7 sing 88 n n 
C9 H37 1V7 sing 89 n n 
C36 H38 1V7 sing 90 n n 
N H39 1V7 sing 91 n n 
#
_atom_sites.entry_id                     7WPI 
_atom_sites.fract_transf_matrix[1][1]    0.015506 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012448 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008477 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1V7 A 1 601 1 1V7 P80 . 
C 3 ACT A 1 602 1 ACT ACT . 
D 4 EDO A 1 603 1 EDO EDO . 
E 4 EDO A 1 604 3 EDO EDO . 
F 5 HOH A 1 701 55 HOH HOH . 
F 5 HOH A 2 702 38 HOH HOH . 
F 5 HOH A 3 703 48 HOH HOH . 
F 5 HOH A 4 704 50 HOH HOH . 
F 5 HOH A 5 705 68 HOH HOH . 
F 5 HOH A 6 706 17 HOH HOH . 
F 5 HOH A 7 707 15 HOH HOH . 
F 5 HOH A 8 708 7 HOH HOH . 
F 5 HOH A 9 709 66 HOH HOH . 
F 5 HOH A 10 710 44 HOH HOH . 
F 5 HOH A 11 711 31 HOH HOH . 
F 5 HOH A 12 712 39 HOH HOH . 
F 5 HOH A 13 713 32 HOH HOH . 
F 5 HOH A 14 714 2 HOH HOH . 
F 5 HOH A 15 715 11 HOH HOH . 
F 5 HOH A 16 716 62 HOH HOH . 
F 5 HOH A 17 717 41 HOH HOH . 
F 5 HOH A 18 718 52 HOH HOH . 
F 5 HOH A 19 719 36 HOH HOH . 
F 5 HOH A 20 720 18 HOH HOH . 
F 5 HOH A 21 721 56 HOH HOH . 
F 5 HOH A 22 722 34 HOH HOH . 
F 5 HOH A 23 723 24 HOH HOH . 
F 5 HOH A 24 724 28 HOH HOH . 
F 5 HOH A 25 725 53 HOH HOH . 
F 5 HOH A 26 726 25 HOH HOH . 
F 5 HOH A 27 727 60 HOH HOH . 
F 5 HOH A 28 728 58 HOH HOH . 
F 5 HOH A 29 729 29 HOH HOH . 
F 5 HOH A 30 730 67 HOH HOH . 
F 5 HOH A 31 731 47 HOH HOH . 
F 5 HOH A 32 732 30 HOH HOH . 
F 5 HOH A 33 733 12 HOH HOH . 
F 5 HOH A 34 734 46 HOH HOH . 
F 5 HOH A 35 735 4 HOH HOH . 
F 5 HOH A 36 736 22 HOH HOH . 
F 5 HOH A 37 737 13 HOH HOH . 
F 5 HOH A 38 738 51 HOH HOH . 
F 5 HOH A 39 739 6 HOH HOH . 
F 5 HOH A 40 740 40 HOH HOH . 
F 5 HOH A 41 741 43 HOH HOH . 
F 5 HOH A 42 742 26 HOH HOH . 
F 5 HOH A 43 743 45 HOH HOH . 
F 5 HOH A 44 744 14 HOH HOH . 
F 5 HOH A 45 745 10 HOH HOH . 
F 5 HOH A 46 746 27 HOH HOH . 
F 5 HOH A 47 747 35 HOH HOH . 
F 5 HOH A 48 748 1 HOH HOH . 
F 5 HOH A 49 749 23 HOH HOH . 
F 5 HOH A 50 750 37 HOH HOH . 
F 5 HOH A 51 751 63 HOH HOH . 
F 5 HOH A 52 752 64 HOH HOH . 
F 5 HOH A 53 753 65 HOH HOH . 
F 5 HOH A 54 754 59 HOH HOH . 
F 5 HOH A 55 755 5 HOH HOH . 
F 5 HOH A 56 756 19 HOH HOH . 
F 5 HOH A 57 757 9 HOH HOH . 
F 5 HOH A 58 758 54 HOH HOH . 
F 5 HOH A 59 759 61 HOH HOH . 
F 5 HOH A 60 760 16 HOH HOH . 
F 5 HOH A 61 761 20 HOH HOH . 
F 5 HOH A 62 762 3 HOH HOH . 
F 5 HOH A 63 763 8 HOH HOH . 
F 5 HOH A 64 764 57 HOH HOH . 
F 5 HOH A 65 765 21 HOH HOH . 
F 5 HOH A 66 766 42 HOH HOH . 
F 5 HOH A 67 767 33 HOH HOH . 
F 5 HOH A 68 768 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 1V7 . . . B 2 6.733 3.627 -13.087 1 38.71 ? C1 1V7 601 A 1 
HETATM 2 N N1 1V7 . . . B 2 3.418 6.362 -8.136 1 29.85 ? N1 1V7 601 A 1 
HETATM 3 O O1 1V7 . . . B 2 0.08 9.467 -4.47 1 26.43 ? O1 1V7 601 A 1 
HETATM 4 C C2 1V7 . . . B 2 3.51 4.338 -11.266 1 33.9 ? C2 1V7 601 A 1 
HETATM 5 O O2 1V7 . . . B 2 -5.366 4.319 -6.633 1 32.33 ? O2 1V7 601 A 1 
HETATM 6 O O3 1V7 . . . B 2 -3.547 4.159 -8.838 1 32.94 ? O3 1V7 601 A 1 
HETATM 7 C C16 1V7 . . . B 2 -3.503 5.063 -8.007 1 31.47 ? C16 1V7 601 A 1 
HETATM 8 C C17 1V7 . . . B 2 -4.761 5.452 -7.264 1 31.38 ? C17 1V7 601 A 1 
HETATM 9 C C18 1V7 . . . B 2 -6.421 4.548 -5.781 1 30.66 ? C18 1V7 601 A 1 
HETATM 10 C C27 1V7 . . . B 2 -7.451 5.422 -6.103 1 30.25 ? C27 1V7 601 A 1 
HETATM 11 C C26 1V7 . . . B 2 -8.467 5.638 -5.189 1 29.43 ? C26 1V7 601 A 1 
HETATM 12 C C25 1V7 . . . B 2 -8.453 4.997 -3.976 1 29.4 ? C25 1V7 601 A 1 
HETATM 13 C C24 1V7 . . . B 2 -7.429 4.121 -3.661 1 29.82 ? C24 1V7 601 A 1 
HETATM 14 C C19 1V7 . . . B 2 -6.395 3.866 -4.554 1 30.18 ? C19 1V7 601 A 1 
HETATM 15 C C20 1V7 . . . B 2 -5.298 2.835 -4.202 1 30.78 ? C20 1V7 601 A 1 
HETATM 16 C C23 1V7 . . . B 2 -3.908 3.49 -4.259 1 30.97 ? C23 1V7 601 A 1 
HETATM 17 C C22 1V7 . . . B 2 -5.475 2.24 -2.793 1 31.69 ? C22 1V7 601 A 1 
HETATM 18 C C21 1V7 . . . B 2 -5.335 1.675 -5.207 1 31.39 ? C21 1V7 601 A 1 
HETATM 19 N N3 1V7 . . . B 2 -2.389 5.73 -7.709 1 30.03 ? N3 1V7 601 A 1 
HETATM 20 C C15 1V7 . . . B 2 -1.117 5.49 -8.382 1 30.26 ? C15 1V7 601 A 1 
HETATM 21 C C14 1V7 . . . B 2 0.03 5.18 -7.407 1 29.9 ? C14 1V7 601 A 1 
HETATM 22 C C28 1V7 . . . B 2 0.041 3.783 -6.832 1 30.29 ? C28 1V7 601 A 1 
HETATM 23 C C35 1V7 . . . B 2 1.094 3.43 -6.005 1 30.86 ? C35 1V7 601 A 1 
HETATM 24 C C34 1V7 . . . B 2 1.229 2.145 -5.525 1 31.08 ? C34 1V7 601 A 1 
HETATM 25 C C32 1V7 . . . B 2 0.3 1.186 -5.874 1 31.58 ? C32 1V7 601 A 1 
HETATM 26 O O5 1V7 . . . B 2 0.377 -0.128 -5.51 1 32.97 ? O5 1V7 601 A 1 
HETATM 27 C C33 1V7 . . . B 2 1.559 -0.558 -4.832 1 33.07 ? C33 1V7 601 A 1 
HETATM 28 C C30 1V7 . . . B 2 -0.791 1.535 -6.695 1 31.76 ? C30 1V7 601 A 1 
HETATM 29 O O4 1V7 . . . B 2 -1.675 0.528 -6.962 1 32.9 ? O4 1V7 601 A 1 
HETATM 30 C C31 1V7 . . . B 2 -2.605 0.727 -8.029 1 33.42 ? C31 1V7 601 A 1 
HETATM 31 C C29 1V7 . . . B 2 -0.913 2.83 -7.164 1 30.77 ? C29 1V7 601 A 1 
HETATM 32 N N2 1V7 . . . B 2 1.348 5.515 -7.966 1 30.24 ? N2 1V7 601 A 1 
HETATM 33 C C5 1V7 . . . B 2 1.885 5 -9.145 1 30.58 ? C5 1V7 601 A 1 
HETATM 34 C C4 1V7 . . . B 2 1.395 4.122 -10.1 1 31.82 ? C4 1V7 601 A 1 
HETATM 35 C C3 1V7 . . . B 2 2.223 3.798 -11.162 1 32.82 ? C3 1V7 601 A 1 
HETATM 36 C C7 1V7 . . . B 2 2.323 6.312 -7.411 1 29.21 ? C7 1V7 601 A 1 
HETATM 37 C C8 1V7 . . . B 2 2.204 7.002 -6.128 1 28.05 ? C8 1V7 601 A 1 
HETATM 38 C C13 1V7 . . . B 2 3.193 6.836 -5.167 1 27.36 ? C13 1V7 601 A 1 
HETATM 39 C C12 1V7 . . . B 2 3.15 7.55 -3.989 1 27.72 ? C12 1V7 601 A 1 
HETATM 40 C C11 1V7 . . . B 2 2.101 8.422 -3.768 1 27.6 ? C11 1V7 601 A 1 
HETATM 41 BR BR 1V7 . . . B 2 2.011 9.339 -2.118 1 30.66 ? BR 1V7 601 A 1 
HETATM 42 C C10 1V7 . . . B 2 1.096 8.603 -4.712 1 27.03 ? C10 1V7 601 A 1 
HETATM 43 C C9 1V7 . . . B 2 1.155 7.887 -5.896 1 27.09 ? C9 1V7 601 A 1 
HETATM 44 C C6 1V7 . . . B 2 3.165 5.544 -9.226 1 31.28 ? C6 1V7 601 A 1 
HETATM 45 C C36 1V7 . . . B 2 3.987 5.219 -10.297 1 32.87 ? C36 1V7 601 A 1 
HETATM 46 C C 1V7 . . . B 2 4.424 3.985 -12.393 1 36.43 ? C 1V7 601 A 1 
HETATM 47 O O 1V7 . . . B 2 4.01 3.95 -13.548 1 38.02 ? O 1V7 601 A 1 
HETATM 48 N N 1V7 . . . B 2 5.69 3.711 -12.08 1 38.06 ? N 1V7 601 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           48 
#