data_7WPK # _model_server_result.job_id BBpqwuLoC1E1QR8hRciwiQ _model_server_result.datetime_utc '2024-11-14 10:37:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wpk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7WPK # _exptl.entry_id 7WPK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.211 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description METHIONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WPK _cell.length_a 59.256 _cell.length_b 72.773 _cell.length_c 119.066 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WPK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H11 N O2 S' _chem_comp.formula_weight 149.211 _chem_comp.id MET _chem_comp.mon_nstd_flag y _chem_comp.name METHIONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA MET sing 205 n n N H MET sing 206 n n N H2 MET sing 207 n n CA C MET sing 208 n n CA CB MET sing 209 n n CA HA MET sing 210 n n C O MET doub 211 n n C OXT MET sing 212 n n CB CG MET sing 213 n n CB HB2 MET sing 214 n n CB HB3 MET sing 215 n n CG SD MET sing 216 n n CG HG2 MET sing 217 n n CG HG3 MET sing 218 n n SD CE MET sing 219 n n CE HE1 MET sing 220 n n CE HE2 MET sing 221 n n CE HE3 MET sing 222 n n OXT HXT MET sing 223 n n # _atom_sites.entry_id 7WPK _atom_sites.fract_transf_matrix[1][1] 0.016876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013741 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MET A 1 601 1 MET MET . C 3 HOH A 1 701 10 HOH HOH . C 3 HOH A 2 702 9 HOH HOH . C 3 HOH A 3 703 5 HOH HOH . C 3 HOH A 4 704 7 HOH HOH . C 3 HOH A 5 705 8 HOH HOH . C 3 HOH A 6 706 3 HOH HOH . C 3 HOH A 7 707 4 HOH HOH . C 3 HOH A 8 708 1 HOH HOH . C 3 HOH A 9 709 11 HOH HOH . C 3 HOH A 10 710 6 HOH HOH . C 3 HOH A 11 711 12 HOH HOH . C 3 HOH A 12 712 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N MET . . . B 2 3.906 -6.243 -22.109 1 17.48 ? N MET 601 A 1 HETATM 2 C CA MET . . . B 2 4.199 -4.792 -21.88 1 17.48 ? CA MET 601 A 1 HETATM 3 C C MET . . . B 2 4.091 -4.01 -23.189 1 17.47 ? C MET 601 A 1 HETATM 4 O O MET . . . B 2 3.931 -4.581 -24.269 1 17.45 ? O MET 601 A 1 HETATM 5 C CB MET . . . B 2 5.599 -4.587 -21.278 1 17.49 ? CB MET 601 A 1 HETATM 6 C CG MET . . . B 2 5.846 -5.233 -19.917 1 17.47 ? CG MET 601 A 1 HETATM 7 S SD MET . . . B 2 7.575 -5.036 -19.438 1 17.47 ? SD MET 601 A 1 HETATM 8 C CE MET . . . B 2 7.542 -5.529 -17.716 1 17.49 ? CE MET 601 A 1 HETATM 9 O OXT MET . . . B 2 4.162 -2.784 -23.204 1 17.46 ? OXT MET 601 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #