data_7WPT # _model_server_result.job_id e7JyWG5UNGAwxxhFW0ssKA _model_server_result.datetime_utc '2024-12-12 14:04:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wpt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":607}' # _entry.id 7WPT # _exptl.entry_id 7WPT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WPT _cell.length_a 60.993 _cell.length_b 76.536 _cell.length_c 118.642 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WPT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 174 n n C1 C2 GOL sing 175 n n C1 H11 GOL sing 176 n n C1 H12 GOL sing 177 n n O1 HO1 GOL sing 178 n n C2 O2 GOL sing 179 n n C2 C3 GOL sing 180 n n C2 H2 GOL sing 181 n n O2 HO2 GOL sing 182 n n C3 O3 GOL sing 183 n n C3 H31 GOL sing 184 n n C3 H32 GOL sing 185 n n O3 HO3 GOL sing 186 n n # _atom_sites.entry_id 7WPT _atom_sites.fract_transf_matrix[1][1] 0.016395 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008429 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 601 1 ATP ATP . C 3 XM0 A 1 602 1 XM0 DIA . D 4 EDO A 1 603 2 EDO EDO . E 4 EDO A 1 604 3 EDO EDO . F 4 EDO A 1 605 4 EDO EDO . G 4 EDO A 1 606 5 EDO EDO . H 5 GOL A 1 607 1 GOL GOL . I 6 HOH A 1 701 17 HOH HOH . I 6 HOH A 2 702 13 HOH HOH . I 6 HOH A 3 703 42 HOH HOH . I 6 HOH A 4 704 14 HOH HOH . I 6 HOH A 5 705 31 HOH HOH . I 6 HOH A 6 706 32 HOH HOH . I 6 HOH A 7 707 40 HOH HOH . I 6 HOH A 8 708 44 HOH HOH . I 6 HOH A 9 709 23 HOH HOH . I 6 HOH A 10 710 9 HOH HOH . I 6 HOH A 11 711 28 HOH HOH . I 6 HOH A 12 712 34 HOH HOH . I 6 HOH A 13 713 35 HOH HOH . I 6 HOH A 14 714 5 HOH HOH . I 6 HOH A 15 715 37 HOH HOH . I 6 HOH A 16 716 27 HOH HOH . I 6 HOH A 17 717 18 HOH HOH . I 6 HOH A 18 718 33 HOH HOH . I 6 HOH A 19 719 24 HOH HOH . I 6 HOH A 20 720 3 HOH HOH . I 6 HOH A 21 721 16 HOH HOH . I 6 HOH A 22 722 6 HOH HOH . I 6 HOH A 23 723 8 HOH HOH . I 6 HOH A 24 724 39 HOH HOH . I 6 HOH A 25 725 43 HOH HOH . I 6 HOH A 26 726 2 HOH HOH . I 6 HOH A 27 727 4 HOH HOH . I 6 HOH A 28 728 10 HOH HOH . I 6 HOH A 29 729 12 HOH HOH . I 6 HOH A 30 730 20 HOH HOH . I 6 HOH A 31 731 38 HOH HOH . I 6 HOH A 32 732 21 HOH HOH . I 6 HOH A 33 733 45 HOH HOH . I 6 HOH A 34 734 26 HOH HOH . I 6 HOH A 35 735 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 5 -1.532 20.104 8.094 1 50.4 ? C1 GOL 607 A 1 HETATM 2 O O1 GOL . . . H 5 -0.154 20.465 8.115 1 47.67 ? O1 GOL 607 A 1 HETATM 3 C C2 GOL . . . H 5 -1.756 18.827 7.31 1 49.09 ? C2 GOL 607 A 1 HETATM 4 O O2 GOL . . . H 5 -1.096 17.741 7.955 1 46.04 ? O2 GOL 607 A 1 HETATM 5 C C3 GOL . . . H 5 -3.212 18.476 7.12 1 48.72 ? C3 GOL 607 A 1 HETATM 6 O O3 GOL . . . H 5 -3.427 17.079 7.296 1 49.25 ? O3 GOL 607 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 95 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #