data_7WSQ # _model_server_result.job_id 4KTMmX0ADTUnriw2ecSS6g _model_server_result.datetime_utc '2024-10-19 09:24:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wsq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 7WSQ # _exptl.entry_id 7WSQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WSQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C SG CYS 52 C CYS 52 1_555 K CAB HEC . C HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale2 C SG CYS 55 C CYS 55 1_555 K CAC HEC . C HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale3 C SG CYS 201 C CYS 201 1_555 J CAB HEC . C HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 C SG CYS 204 C CYS 204 1_555 J CAC HEC . C HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale5 C SG CYS 343 C CYS 343 1_555 I CAB HEC . C HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale6 C SG CYS 346 C CYS 346 1_555 I CAC HEC . C HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? covale ? covale7 F SG CYS 52 F CYS 52 1_555 P CAB HEC . F HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale8 F SG CYS 55 F CYS 55 1_555 P CAC HEC . F HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale9 F SG CYS 201 F CYS 201 1_555 O CAB HEC . F HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale10 F SG CYS 204 F CYS 204 1_555 O CAC HEC . F HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale11 F SG CYS 343 F CYS 343 1_555 N CAB HEC . F HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale12 F SG CYS 346 F CYS 346 1_555 N CAC HEC . F HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? metalc ? metalc1 A SG CYS 216 A CYS 216 1_555 H FE4 F3S . A F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A SG CYS 222 A CYS 222 1_555 H FE3 F3S . A F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc3 A SG CYS 226 A CYS 226 1_555 H FE1 F3S . A F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc4 C NE2 HIS 56 C HIS 56 1_555 K FE HEC . C HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc5 C SD MET 118 C MET 118 1_555 K FE HEC . C HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc6 C NE2 HIS 205 C HIS 205 1_555 J FE HEC . C HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 C SD MET 395 C MET 395 1_555 I FE HEC . C HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc8 D SG CYS 216 D CYS 216 1_555 M FE4 F3S . D F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc9 D SG CYS 222 D CYS 222 1_555 M FE3 F3S . D F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc10 D SG CYS 226 D CYS 226 1_555 M FE1 F3S . D F3S 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc11 F NE2 HIS 56 F HIS 56 1_555 P FE HEC . F HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc12 F SD MET 118 F MET 118 1_555 P FE HEC . F HEC 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc13 F NE2 HIS 205 F HIS 205 1_555 O FE HEC . F HEC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc14 F SD MET 395 F MET 395 1_555 N FE HEC . F HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 92 n n PA O2A FAD sing 93 n n PA O5B FAD sing 94 n n PA O3P FAD sing 95 n n O2A HOA2 FAD sing 96 n n O5B C5B FAD sing 97 n n C5B C4B FAD sing 98 n n C5B H51A FAD sing 99 n n C5B H52A FAD sing 100 n n C4B O4B FAD sing 101 n n C4B C3B FAD sing 102 n n C4B H4B FAD sing 103 n n O4B C1B FAD sing 104 n n C3B O3B FAD sing 105 n n C3B C2B FAD sing 106 n n C3B H3B FAD sing 107 n n O3B HO3A FAD sing 108 n n C2B O2B FAD sing 109 n n C2B C1B FAD sing 110 n n C2B H2B FAD sing 111 n n O2B HO2A FAD sing 112 n n C1B N9A FAD sing 113 n n C1B H1B FAD sing 114 n n N9A C8A FAD sing 115 n y N9A C4A FAD sing 116 n y C8A N7A FAD doub 117 n y C8A H8A FAD sing 118 n n N7A C5A FAD sing 119 n y C5A C6A FAD sing 120 n y C5A C4A FAD doub 121 n y C6A N6A FAD sing 122 n n C6A N1A FAD doub 123 n y N6A H61A FAD sing 124 n n N6A H62A FAD sing 125 n n N1A C2A FAD sing 126 n y C2A N3A FAD doub 127 n y C2A H2A FAD sing 128 n n N3A C4A FAD sing 129 n y N1 C2 FAD sing 130 n n N1 C10 FAD doub 131 n n C2 O2 FAD doub 132 n n C2 N3 FAD sing 133 n n N3 C4 FAD sing 134 n n N3 HN3 FAD sing 135 n n C4 O4 FAD doub 136 n n C4 C4X FAD sing 137 n n C4X N5 FAD doub 138 n n C4X C10 FAD sing 139 n n N5 C5X FAD sing 140 n n C5X C6 FAD doub 141 n y C5X C9A FAD sing 142 n y C6 C7 FAD sing 143 n y C6 H6 FAD sing 144 n n C7 C7M FAD sing 145 n n C7 C8 FAD doub 146 n y C7M HM71 FAD sing 147 n n C7M HM72 FAD sing 148 n n C7M HM73 FAD sing 149 n n C8 C8M FAD sing 150 n n C8 C9 FAD sing 151 n y C8M HM81 FAD sing 152 n n C8M HM82 FAD sing 153 n n C8M HM83 FAD sing 154 n n C9 C9A FAD doub 155 n y C9 H9 FAD sing 156 n n C9A N10 FAD sing 157 n n N10 C10 FAD sing 158 n n N10 C1' FAD sing 159 n n C1' C2' FAD sing 160 n n C1' "H1'1" FAD sing 161 n n C1' "H1'2" FAD sing 162 n n C2' O2' FAD sing 163 n n C2' C3' FAD sing 164 n n C2' H2' FAD sing 165 n n O2' HO2' FAD sing 166 n n C3' O3' FAD sing 167 n n C3' C4' FAD sing 168 n n C3' H3' FAD sing 169 n n O3' HO3' FAD sing 170 n n C4' O4' FAD sing 171 n n C4' C5' FAD sing 172 n n C4' H4' FAD sing 173 n n O4' HO4' FAD sing 174 n n C5' O5' FAD sing 175 n n C5' "H5'1" FAD sing 176 n n C5' "H5'2" FAD sing 177 n n O5' P FAD sing 178 n n P O1P FAD doub 179 n n P O2P FAD sing 180 n n P O3P FAD sing 181 n n O2P HOP2 FAD sing 182 n n # _atom_sites.entry_id 7WSQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 FAD A 1 601 601 FAD FAD . H 5 F3S A 1 602 602 F3S F3S . I 6 HEC C 1 501 501 HEC HEC . J 6 HEC C 1 502 502 HEC HEC . K 6 HEC C 1 503 503 HEC HEC . L 4 FAD D 1 601 601 FAD FAD . M 5 F3S D 1 602 602 F3S F3S . N 6 HEC F 1 501 501 HEC HEC . O 6 HEC F 1 502 502 HEC HEC . P 6 HEC F 1 503 503 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . G 4 110.011 102.361 140.476 1 28.4 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . G 4 109.691 102.361 139.018 1 28.4 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . G 4 111.38 102.781 140.899 1 28.4 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . G 4 108.929 103.275 141.227 1 28.4 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . G 4 108.811 104.63 140.713 1 28.4 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . G 4 107.555 105.28 141.236 1 28.4 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . G 4 107.82 105.881 142.531 1 28.4 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . G 4 106.945 106.398 140.374 1 28.4 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . G 4 105.53 106.272 140.351 1 28.4 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . G 4 107.316 107.657 141.16 1 28.4 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . G 4 106.498 108.773 140.882 1 28.4 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . G 4 107.172 107.129 142.58 1 28.4 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . G 4 107.853 107.954 143.562 1 28.4 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . G 4 109.168 107.879 143.939 1 28.4 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . G 4 109.485 108.771 144.849 1 28.4 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . G 4 108.306 109.471 145.079 1 28.4 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . G 4 107.983 110.542 145.934 1 28.4 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . G 4 108.854 111.124 146.754 1 28.4 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . G 4 106.707 110.996 145.908 1 28.4 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . G 4 105.833 110.407 145.081 1 28.4 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . G 4 106.023 109.397 144.236 1 28.4 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . G 4 107.295 108.972 144.286 1 28.4 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . G 4 112.209 90.347 141.761 1 28.4 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . G 4 111.883 89.028 141.759 1 28.4 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . G 4 110.995 88.584 141.039 1 28.4 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . G 4 112.508 88.134 142.539 1 28.4 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . G 4 113.513 88.492 143.395 1 28.4 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . G 4 114.042 87.639 144.096 1 28.4 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . G 4 113.897 89.841 143.426 1 28.4 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . G 4 114.863 90.188 144.231 1 28.4 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . G 4 115.233 91.504 144.237 1 28.4 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . G 4 116.283 91.883 145.09 1 28.4 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . G 4 116.722 93.182 145.152 1 28.4 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . G 4 117.857 93.545 146.073 1 28.4 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . G 4 116.096 94.165 144.351 1 28.4 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . G 4 116.559 95.598 144.409 1 28.4 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . G 4 115.054 93.806 143.514 1 28.4 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . G 4 114.605 92.477 143.434 1 28.4 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . G 4 113.56 92.07 142.602 1 28.4 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . G 4 113.18 90.739 142.558 1 28.4 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . G 4 112.885 93.049 141.728 1 28.4 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . G 4 111.802 93.859 142.423 1 28.4 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . G 4 110.783 92.991 142.899 1 28.4 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . G 4 111.203 94.841 141.412 1 28.4 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . G 4 112.267 95.419 140.664 1 28.4 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . G 4 110.364 95.981 141.995 1 28.4 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . G 4 109.201 95.443 142.624 1 28.4 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . G 4 109.949 96.967 140.926 1 28.4 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . G 4 109.854 98.348 141.388 1 28.4 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . G 4 110.215 99.511 140.34 1 28.4 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . G 4 111.7 99.541 140.16 1 28.4 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . G 4 109.351 99.267 139.148 1 28.4 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . G 4 109.735 100.879 141.035 1 28.4 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #