data_7WTD # _model_server_result.job_id 3_CS3HOgIU8TG_hyhZGWJQ _model_server_result.datetime_utc '2024-12-04 19:20:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wtd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2000}' # _entry.id 7WTD # _exptl.entry_id 7WTD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WTD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 752 A CYS 752 1_555 A SG CYS 786 A CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 752 B CYS 752 1_555 B SG CYS 786 B CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 C SG CYS 752 C CYS 752 1_555 C SG CYS 786 C CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 752 D CYS 752 1_555 D SG CYS 786 D CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 C CE LYS 1056 C LYS 1056 1_555 F N7A COA . C COA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 F N6A COA . C COA 2001 1_555 D C ASP 81 D ASP 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WTD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATP C 1 2000 2000 ATP ATP . F 3 COA C 1 2001 2001 COA COA . G 3 COA D 1 2001 2001 COA COA . H 2 ATP D 1 2002 2000 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 2 213.641 138.544 142.902 1 143.56 ? PG ATP 2000 C 1 HETATM 2 O O1G ATP . . . E 2 212.906 139.021 144.13 1 143.56 ? O1G ATP 2000 C 1 HETATM 3 O O2G ATP . . . E 2 213.203 137.171 142.459 1 143.56 ? O2G ATP 2000 C 1 HETATM 4 O O3G ATP . . . E 2 215.14 138.664 143.035 1 143.56 ? O3G ATP 2000 C 1 HETATM 5 P PB ATP . . . E 2 214.061 140.294 140.572 1 143.56 ? PB ATP 2000 C 1 HETATM 6 O O1B ATP . . . E 2 215.515 140.137 140.87 1 143.56 ? O1B ATP 2000 C 1 HETATM 7 O O2B ATP . . . E 2 213.491 141.661 140.373 1 143.56 ? O2B ATP 2000 C 1 HETATM 8 O O3B ATP . . . E 2 213.22 139.55 141.713 1 143.56 ? O3B ATP 2000 C 1 HETATM 9 P PA ATP . . . E 2 214.601 138.627 138.217 1 143.56 ? PA ATP 2000 C 1 HETATM 10 O O1A ATP . . . E 2 214.272 139.148 136.857 1 143.56 ? O1A ATP 2000 C 1 HETATM 11 O O2A ATP . . . E 2 216.024 138.67 138.666 1 143.56 ? O2A ATP 2000 C 1 HETATM 12 O O3A ATP . . . E 2 213.698 139.397 139.296 1 143.56 ? O3A ATP 2000 C 1 HETATM 13 O O5' ATP . . . E 2 214.042 137.131 138.363 1 143.56 ? O5' ATP 2000 C 1 HETATM 14 C C5' ATP . . . E 2 213.423 136.507 137.21 1 143.56 ? C5' ATP 2000 C 1 HETATM 15 C C4' ATP . . . E 2 212.275 135.639 137.668 1 143.56 ? C4' ATP 2000 C 1 HETATM 16 O O4' ATP . . . E 2 211.616 135.072 136.506 1 143.56 ? O4' ATP 2000 C 1 HETATM 17 C C3' ATP . . . E 2 212.647 134.447 138.561 1 143.56 ? C3' ATP 2000 C 1 HETATM 18 O O3' ATP . . . E 2 212.508 134.772 139.938 1 143.56 ? O3' ATP 2000 C 1 HETATM 19 C C2' ATP . . . E 2 211.637 133.379 138.13 1 143.56 ? C2' ATP 2000 C 1 HETATM 20 O O2' ATP . . . E 2 210.394 133.505 138.786 1 143.56 ? O2' ATP 2000 C 1 HETATM 21 C C1' ATP . . . E 2 211.522 133.672 136.639 1 143.56 ? C1' ATP 2000 C 1 HETATM 22 N N9 ATP . . . E 2 212.579 133.065 135.837 1 143.56 ? N9 ATP 2000 C 1 HETATM 23 C C8 ATP . . . E 2 213.821 133.584 135.559 1 143.56 ? C8 ATP 2000 C 1 HETATM 24 N N7 ATP . . . E 2 214.543 132.785 134.805 1 143.56 ? N7 ATP 2000 C 1 HETATM 25 C C5 ATP . . . E 2 213.726 131.685 134.577 1 143.56 ? C5 ATP 2000 C 1 HETATM 26 C C6 ATP . . . E 2 213.912 130.492 133.85 1 143.56 ? C6 ATP 2000 C 1 HETATM 27 N N6 ATP . . . E 2 215.028 130.195 133.19 1 143.56 ? N6 ATP 2000 C 1 HETATM 28 N N1 ATP . . . E 2 212.887 129.608 133.833 1 143.56 ? N1 ATP 2000 C 1 HETATM 29 C C2 ATP . . . E 2 211.768 129.911 134.5 1 143.56 ? C2 ATP 2000 C 1 HETATM 30 N N3 ATP . . . E 2 211.48 130.995 135.215 1 143.56 ? N3 ATP 2000 C 1 HETATM 31 C C4 ATP . . . E 2 212.514 131.852 135.211 1 143.56 ? C4 ATP 2000 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #