data_7WTD # _model_server_result.job_id lWrxsr3YMCpw7dfNy-8atQ _model_server_result.datetime_utc '2024-12-04 19:08:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wtd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2001}' # _entry.id 7WTD # _exptl.entry_id 7WTD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WTD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 752 A CYS 752 1_555 A SG CYS 786 A CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 752 B CYS 752 1_555 B SG CYS 786 B CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 C SG CYS 752 C CYS 752 1_555 C SG CYS 786 C CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 752 D CYS 752 1_555 D SG CYS 786 D CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 C CE LYS 1056 C LYS 1056 1_555 F N7A COA . C COA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 F N6A COA . C COA 2001 1_555 D C ASP 81 D ASP 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WTD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATP C 1 2000 2000 ATP ATP . F 3 COA C 1 2001 2001 COA COA . G 3 COA D 1 2001 2001 COA COA . H 2 ATP D 1 2002 2000 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . G 3 211.578 159.068 168.718 1 204.45 ? N1A COA 2001 D 1 HETATM 2 C C2A COA . . . G 3 210.311 159.502 168.937 1 204.45 ? C2A COA 2001 D 1 HETATM 3 N N3A COA . . . G 3 209.599 159.044 170.029 1 204.45 ? N3A COA 2001 D 1 HETATM 4 C C4A COA . . . G 3 210.166 158.148 170.895 1 204.45 ? C4A COA 2001 D 1 HETATM 5 C C5A COA . . . G 3 211.412 157.717 170.682 1 204.45 ? C5A COA 2001 D 1 HETATM 6 C C6A COA . . . G 3 212.136 158.191 169.564 1 204.45 ? C6A COA 2001 D 1 HETATM 7 N N6A COA . . . G 3 213.454 158.037 168.923 1 204.45 ? N6A COA 2001 D 1 HETATM 8 N N7A COA . . . G 3 211.734 156.841 171.678 1 204.45 ? N7A COA 2001 D 1 HETATM 9 C C8A COA . . . G 3 210.675 156.741 172.505 1 204.45 ? C8A COA 2001 D 1 HETATM 10 N N9A COA . . . G 3 209.697 157.542 172.028 1 204.45 ? N9A COA 2001 D 1 HETATM 11 C C1B COA . . . G 3 208.575 157.376 172.986 1 204.45 ? C1B COA 2001 D 1 HETATM 12 C C2B COA . . . G 3 208.355 156.104 173.301 1 204.45 ? C2B COA 2001 D 1 HETATM 13 O O2B COA . . . G 3 207.404 155.509 172.382 1 204.45 ? O2B COA 2001 D 1 HETATM 14 C C3B COA . . . G 3 207.746 156.145 174.814 1 204.45 ? C3B COA 2001 D 1 HETATM 15 O O3B COA . . . G 3 206.356 156.519 174.78 1 204.45 ? O3B COA 2001 D 1 HETATM 16 P P3B COA . . . G 3 205.253 155.687 175.7 1 204.45 ? P3B COA 2001 D 1 HETATM 17 O O7A COA . . . G 3 204.551 156.62 176.563 1 204.45 ? O7A COA 2001 D 1 HETATM 18 O O8A COA . . . G 3 205.962 154.633 176.556 1 204.45 ? O8A COA 2001 D 1 HETATM 19 O O9A COA . . . G 3 204.243 154.99 174.784 1 204.45 ? O9A COA 2001 D 1 HETATM 20 C C4B COA . . . G 3 208.475 157.092 175.46 1 204.45 ? C4B COA 2001 D 1 HETATM 21 O O4B COA . . . G 3 208.922 158.087 174.371 1 204.45 ? O4B COA 2001 D 1 HETATM 22 C C5B COA . . . G 3 209.709 156.455 176.118 1 204.45 ? C5B COA 2001 D 1 HETATM 23 O O5B COA . . . G 3 210.512 157.469 176.754 1 204.45 ? O5B COA 2001 D 1 HETATM 24 P P1A COA . . . G 3 210.097 157.988 178.296 1 204.45 ? P1A COA 2001 D 1 HETATM 25 O O1A COA . . . G 3 209.324 159.279 178.202 1 204.45 ? O1A COA 2001 D 1 HETATM 26 O O2A COA . . . G 3 211.334 158.2 179.106 1 204.45 ? O2A COA 2001 D 1 HETATM 27 O O3A COA . . . G 3 209.167 156.861 179.033 1 204.45 ? O3A COA 2001 D 1 HETATM 28 P P2A COA . . . G 3 209.771 155.425 179.605 1 204.45 ? P2A COA 2001 D 1 HETATM 29 O O4A COA . . . G 3 208.68 154.448 179.677 1 204.45 ? O4A COA 2001 D 1 HETATM 30 O O5A COA . . . G 3 210.35 155.652 180.957 1 204.45 ? O5A COA 2001 D 1 HETATM 31 O O6A COA . . . G 3 210.941 154.889 178.589 1 204.45 ? O6A COA 2001 D 1 HETATM 32 C CBP COA . . . G 3 213.228 154.486 177.861 1 204.45 ? CBP COA 2001 D 1 HETATM 33 C CCP COA . . . G 3 212.256 154.832 179.054 1 204.45 ? CCP COA 2001 D 1 HETATM 34 C CDP COA . . . G 3 214.644 154.223 178.419 1 204.45 ? CDP COA 2001 D 1 HETATM 35 C CEP COA . . . G 3 213.272 155.706 176.869 1 204.45 ? CEP COA 2001 D 1 HETATM 36 C CAP COA . . . G 3 212.728 153.204 177.13 1 204.45 ? CAP COA 2001 D 1 HETATM 37 O OAP COA . . . G 3 211.581 152.788 177.691 1 204.45 ? OAP COA 2001 D 1 HETATM 38 C C9P COA . . . G 3 212.491 153.462 175.598 1 204.45 ? C9P COA 2001 D 1 HETATM 39 O O9P COA . . . G 3 211.425 153.767 175.213 1 204.45 ? O9P COA 2001 D 1 HETATM 40 N N8P COA . . . G 3 213.618 153.307 174.628 1 204.45 ? N8P COA 2001 D 1 HETATM 41 C C7P COA . . . G 3 213.373 153.55 173.188 1 204.45 ? C7P COA 2001 D 1 HETATM 42 C C6P COA . . . G 3 212.507 152.356 172.607 1 204.45 ? C6P COA 2001 D 1 HETATM 43 C C5P COA . . . G 3 213.066 151.029 173.136 1 204.45 ? C5P COA 2001 D 1 HETATM 44 O O5P COA . . . G 3 213.773 151.019 174.115 1 204.45 ? O5P COA 2001 D 1 HETATM 45 N N4P COA . . . G 3 212.736 149.762 172.441 1 204.45 ? N4P COA 2001 D 1 HETATM 46 C C3P COA . . . G 3 213.271 148.479 172.943 1 204.45 ? C3P COA 2001 D 1 HETATM 47 C C2P COA . . . G 3 213.331 147.499 171.807 1 204.45 ? C2P COA 2001 D 1 HETATM 48 S S1P COA . . . G 3 213.911 148.354 170.287 1 204.45 ? S1P COA 2001 D 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #