data_7WTD # _model_server_result.job_id NIh8oLxUUqTgQF6xuzsMNQ _model_server_result.datetime_utc '2024-12-04 19:04:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wtd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2002}' # _entry.id 7WTD # _exptl.entry_id 7WTD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WTD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 752 A CYS 752 1_555 A SG CYS 786 A CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 752 B CYS 752 1_555 B SG CYS 786 B CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 C SG CYS 752 C CYS 752 1_555 C SG CYS 786 C CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 752 D CYS 752 1_555 D SG CYS 786 D CYS 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? covale ? covale1 C CE LYS 1056 C LYS 1056 1_555 F N7A COA . C COA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 F N6A COA . C COA 2001 1_555 D C ASP 81 D ASP 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WTD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATP C 1 2000 2000 ATP ATP . F 3 COA C 1 2001 2001 COA COA . G 3 COA D 1 2001 2001 COA COA . H 2 ATP D 1 2002 2000 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . H 2 198.961 128.186 200.786 1 148.35 ? PG ATP 2002 D 1 HETATM 2 O O1G ATP . . . H 2 199.897 129.103 201.495 1 148.35 ? O1G ATP 2002 D 1 HETATM 3 O O2G ATP . . . H 2 198.288 128.818 199.565 1 148.35 ? O2G ATP 2002 D 1 HETATM 4 O O3G ATP . . . H 2 197.888 127.581 201.697 1 148.35 ? O3G ATP 2002 D 1 HETATM 5 P PB ATP . . . H 2 199.614 125.848 199.045 1 148.35 ? PB ATP 2002 D 1 HETATM 6 O O1B ATP . . . H 2 198.281 125.215 199.033 1 148.35 ? O1B ATP 2002 D 1 HETATM 7 O O2B ATP . . . H 2 200.043 126.523 197.745 1 148.35 ? O2B ATP 2002 D 1 HETATM 8 O O3B ATP . . . H 2 199.743 126.924 200.202 1 148.35 ? O3B ATP 2002 D 1 HETATM 9 P PA ATP . . . H 2 201.721 124.573 200.68 1 148.35 ? PA ATP 2002 D 1 HETATM 10 O O1A ATP . . . H 2 201.036 124.86 201.955 1 148.35 ? O1A ATP 2002 D 1 HETATM 11 O O2A ATP . . . H 2 202.276 123.156 200.547 1 148.35 ? O2A ATP 2002 D 1 HETATM 12 O O3A ATP . . . H 2 200.758 124.814 199.44 1 148.35 ? O3A ATP 2002 D 1 HETATM 13 O O5' ATP . . . H 2 202.901 125.588 200.421 1 148.35 ? O5' ATP 2002 D 1 HETATM 14 C C5' ATP . . . H 2 204.219 125.126 200.064 1 148.35 ? C5' ATP 2002 D 1 HETATM 15 C C4' ATP . . . H 2 205.209 126.243 200.276 1 148.35 ? C4' ATP 2002 D 1 HETATM 16 O O4' ATP . . . H 2 205.189 126.65 201.663 1 148.35 ? O4' ATP 2002 D 1 HETATM 17 C C3' ATP . . . H 2 206.661 125.881 199.973 1 148.35 ? C3' ATP 2002 D 1 HETATM 18 O O3' ATP . . . H 2 206.986 126.165 198.616 1 148.35 ? O3' ATP 2002 D 1 HETATM 19 C C2' ATP . . . H 2 207.431 126.775 200.943 1 148.35 ? C2' ATP 2002 D 1 HETATM 20 O O2' ATP . . . H 2 207.551 128.104 200.444 1 148.35 ? O2' ATP 2002 D 1 HETATM 21 C C1' ATP . . . H 2 206.512 126.748 202.163 1 148.35 ? C1' ATP 2002 D 1 HETATM 22 N N9 ATP . . . H 2 206.745 125.623 203.061 1 148.35 ? N9 ATP 2002 D 1 HETATM 23 C C8 ATP . . . H 2 205.853 124.64 203.398 1 148.35 ? C8 ATP 2002 D 1 HETATM 24 N N7 ATP . . . H 2 206.33 123.747 204.231 1 148.35 ? N7 ATP 2002 D 1 HETATM 25 C C5 ATP . . . H 2 207.628 124.171 204.458 1 148.35 ? C5 ATP 2002 D 1 HETATM 26 C C6 ATP . . . H 2 208.671 123.655 205.251 1 148.35 ? C6 ATP 2002 D 1 HETATM 27 N N6 ATP . . . H 2 208.562 122.548 205.995 1 148.35 ? N6 ATP 2002 D 1 HETATM 28 N N1 ATP . . . H 2 209.847 124.319 205.256 1 148.35 ? N1 ATP 2002 D 1 HETATM 29 C C2 ATP . . . H 2 209.962 125.424 204.515 1 148.35 ? C2 ATP 2002 D 1 HETATM 30 N N3 ATP . . . H 2 209.052 126.004 203.731 1 148.35 ? N3 ATP 2002 D 1 HETATM 31 C C4 ATP . . . H 2 207.901 125.325 203.743 1 148.35 ? C4 ATP 2002 D 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #