data_7WU3 # _model_server_result.job_id X6JP5uwf6TVpLnGniLn8FA _model_server_result.datetime_utc '2024-10-20 12:34:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 7WU3 # _exptl.entry_id 7WU3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 496.638 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WU3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 46 N CYS 22 1_555 D SG CYS 120 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 D SG CYS 123 N CYS 99 1_555 D SG CYS 131 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 E SG CYS 433 R CYS 657 1_555 E SG CYS 509 R CYS 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C24 H51 N O7 P' _chem_comp.formula_weight 496.638 _chem_comp.id K6G _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WU3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id K6G _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 901 _pdbx_nonpoly_scheme.auth_seq_num 901 _pdbx_nonpoly_scheme.pdb_mon_id K6G _pdbx_nonpoly_scheme.auth_mon_id LPC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O K6G . . . F 6 150.993 146.412 121.469 1 83.07 ? O K6G 901 R 1 HETATM 2 C C10 K6G . . . F 6 148.081 143.83 125.238 1 83.07 ? C10 K6G 901 R 1 HETATM 3 C C11 K6G . . . F 6 148.515 145.123 125.922 1 83.07 ? C11 K6G 901 R 1 HETATM 4 C C12 K6G . . . F 6 149.393 145.993 125.027 1 83.07 ? C12 K6G 901 R 1 HETATM 5 C C13 K6G . . . F 6 148.573 146.797 124.021 1 83.07 ? C13 K6G 901 R 1 HETATM 6 C C14 K6G . . . F 6 148.919 146.449 122.577 1 83.07 ? C14 K6G 901 R 1 HETATM 7 C C15 K6G . . . F 6 150.255 147.047 122.144 1 83.07 ? C15 K6G 901 R 1 HETATM 8 C C16 K6G . . . F 6 151.978 148.507 122.778 1 83.07 ? C16 K6G 901 R 1 HETATM 9 C C17 K6G . . . F 6 152.192 148.685 124.281 1 83.07 ? C17 K6G 901 R 1 HETATM 10 C C2 K6G . . . F 6 142.212 139.419 130.807 1 83.07 ? C2 K6G 901 R 1 HETATM 11 C C3 K6G . . . F 6 143.441 139.95 130.066 1 83.07 ? C3 K6G 901 R 1 HETATM 12 C C4 K6G . . . F 6 143.381 139.749 128.554 1 83.07 ? C4 K6G 901 R 1 HETATM 13 C C5 K6G . . . F 6 144.622 140.285 127.849 1 83.07 ? C5 K6G 901 R 1 HETATM 14 C C6 K6G . . . F 6 144.817 141.781 128.075 1 83.07 ? C6 K6G 901 R 1 HETATM 15 C C7 K6G . . . F 6 146.232 142.228 127.719 1 83.07 ? C7 K6G 901 R 1 HETATM 16 C C8 K6G . . . F 6 146.511 142.109 126.224 1 83.07 ? C8 K6G 901 R 1 HETATM 17 C C9 K6G . . . F 6 146.63 143.472 125.548 1 83.07 ? C9 K6G 901 R 1 HETATM 18 O O1 K6G . . . F 6 150.609 148.342 122.539 1 83.07 ? O1 K6G 901 R 1 HETATM 19 O O6 K6G . . . F 6 152.738 147.497 124.784 1 83.07 ? O6 K6G 901 R 1 HETATM 20 C C1 K6G . . . F 6 141.721 138.064 130.301 1 83.07 ? C1 K6G 901 R 1 HETATM 21 C C18 K6G . . . F 6 140.362 138.144 129.605 1 83.07 ? C18 K6G 901 R 1 HETATM 22 C C19 K6G . . . F 6 153.162 149.82 124.605 1 83.07 ? C19 K6G 901 R 1 HETATM 23 O O2 K6G . . . F 6 152.944 150.237 125.925 1 83.07 ? O2 K6G 901 R 1 HETATM 24 P P1 K6G . . . F 6 153.877 149.595 127.124 1 83.07 ? P1 K6G 901 R 1 HETATM 25 O O4 K6G . . . F 6 154.682 148.443 126.573 1 83.07 ? O4 K6G 901 R 1 HETATM 26 O O5 K6G . . . F 6 154.816 150.654 127.65 1 83.07 ? O5 K6G 901 R 1 HETATM 27 O O3 K6G . . . F 6 152.913 149.062 128.354 1 83.07 ? O3 K6G 901 R 1 HETATM 28 C C21 K6G . . . F 6 152.982 147.711 128.715 1 83.07 ? C21 K6G 901 R 1 HETATM 29 C C22 K6G . . . F 6 152.012 147.47 129.874 1 83.07 ? C22 K6G 901 R 1 HETATM 30 N N1 K6G . . . F 6 151.023 146.448 129.558 1 83.07 ? N1 K6G 901 R 1 HETATM 31 C C24 K6G . . . F 6 151.64 145.305 128.903 1 83.07 ? C24 K6G 901 R 1 HETATM 32 C C25 K6G . . . F 6 150.386 146.002 130.784 1 83.07 ? C25 K6G 901 R 1 HETATM 33 C C26 K6G . . . F 6 150.018 147.018 128.679 1 83.07 ? C26 K6G 901 R 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #