data_7WU3
#
_model_server_result.job_id            3DhYwuS2-ZfP3PEvWJ3qGg 
_model_server_result.datetime_utc      '2024-11-21 22:35:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wu3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":901}' 
#
_entry.id    7WU3 
#
_exptl.entry_id    7WU3 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              496.638 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WU3 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 46 N CYS 22 1_555 D SG CYS 120 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 D SG CYS 123 N CYS 99 1_555 D SG CYS 131 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 E SG CYS 433 R CYS 657 1_555 E SG CYS 509 R CYS 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
#
_chem_comp.formula           'C24 H51 N O7 P' 
_chem_comp.formula_weight    496.638 
_chem_comp.id                K6G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C7 K6G sing 171 n n 
C8 C9 K6G sing 172 n n 
C6 C7 K6G sing 173 n n 
C6 C5 K6G sing 174 n n 
C10 C9 K6G sing 175 n n 
C10 C11 K6G sing 176 n n 
C12 C11 K6G sing 177 n n 
C12 C13 K6G sing 178 n n 
C14 C13 K6G sing 179 n n 
C14 C15 K6G sing 180 n n 
C5 C4 K6G sing 181 n n 
C15 O K6G doub 182 n n 
C15 O1 K6G sing 183 n n 
O1 C16 K6G sing 184 n n 
C4 C3 K6G sing 185 n n 
C17 C16 K6G sing 186 n n 
C17 O6 K6G sing 187 n n 
C3 C2 K6G sing 188 n n 
C10 H1 K6G sing 189 n n 
C10 H2 K6G sing 190 n n 
C11 H3 K6G sing 191 n n 
C11 H4 K6G sing 192 n n 
C12 H5 K6G sing 193 n n 
C12 H6 K6G sing 194 n n 
C13 H7 K6G sing 195 n n 
C13 H8 K6G sing 196 n n 
C14 H9 K6G sing 197 n n 
C14 H10 K6G sing 198 n n 
C16 H11 K6G sing 199 n n 
C16 H12 K6G sing 200 n n 
C17 H13 K6G sing 201 n n 
C2 H15 K6G sing 202 n n 
C2 H16 K6G sing 203 n n 
C3 H18 K6G sing 204 n n 
C3 H19 K6G sing 205 n n 
C4 H20 K6G sing 206 n n 
C4 H21 K6G sing 207 n n 
C5 H22 K6G sing 208 n n 
C5 H23 K6G sing 209 n n 
C6 H24 K6G sing 210 n n 
C6 H25 K6G sing 211 n n 
C7 H26 K6G sing 212 n n 
C7 H27 K6G sing 213 n n 
C8 H28 K6G sing 214 n n 
C8 H29 K6G sing 215 n n 
C9 H30 K6G sing 216 n n 
C9 H31 K6G sing 217 n n 
O6 H32 K6G sing 218 n n 
C2 C1 K6G sing 219 n n 
C1 C18 K6G sing 220 n n 
C17 C19 K6G sing 221 n n 
C19 O2 K6G sing 222 n n 
O2 P1 K6G sing 223 n n 
C1 H14 K6G sing 224 n n 
C1 H17 K6G sing 225 n n 
C18 H33 K6G sing 226 n n 
C18 H34 K6G sing 227 n n 
C18 H35 K6G sing 228 n n 
C19 H36 K6G sing 229 n n 
C19 H37 K6G sing 230 n n 
P1 O4 K6G sing 231 n n 
P1 O5 K6G doub 232 n n 
P1 O3 K6G sing 233 n n 
O3 C21 K6G sing 234 n n 
C21 C22 K6G sing 235 n n 
C22 N1 K6G sing 236 n n 
N1 C24 K6G sing 237 n n 
N1 C25 K6G sing 238 n n 
N1 C26 K6G sing 239 n n 
O4 H38 K6G sing 240 n n 
C21 H41 K6G sing 241 n n 
C21 H42 K6G sing 242 n n 
C22 H43 K6G sing 243 n n 
C22 H44 K6G sing 244 n n 
C24 H45 K6G sing 245 n n 
C24 H46 K6G sing 246 n n 
C24 H47 K6G sing 247 n n 
C25 H48 K6G sing 248 n n 
C25 H49 K6G sing 249 n n 
C25 H50 K6G sing 250 n n 
C26 H51 K6G sing 251 n n 
C26 H52 K6G sing 252 n n 
C26 H53 K6G sing 253 n n 
#
_atom_sites.entry_id                     7WU3 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           K6G 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      901 
_pdbx_nonpoly_scheme.auth_seq_num     901 
_pdbx_nonpoly_scheme.pdb_mon_id       K6G 
_pdbx_nonpoly_scheme.auth_mon_id      LPC 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O K6G . . . F 6 150.993 146.412 121.469 1 83.07 ? O K6G 901 R 1 
HETATM 2 C C10 K6G . . . F 6 148.081 143.83 125.238 1 83.07 ? C10 K6G 901 R 1 
HETATM 3 C C11 K6G . . . F 6 148.515 145.123 125.922 1 83.07 ? C11 K6G 901 R 1 
HETATM 4 C C12 K6G . . . F 6 149.393 145.993 125.027 1 83.07 ? C12 K6G 901 R 1 
HETATM 5 C C13 K6G . . . F 6 148.573 146.797 124.021 1 83.07 ? C13 K6G 901 R 1 
HETATM 6 C C14 K6G . . . F 6 148.919 146.449 122.577 1 83.07 ? C14 K6G 901 R 1 
HETATM 7 C C15 K6G . . . F 6 150.255 147.047 122.144 1 83.07 ? C15 K6G 901 R 1 
HETATM 8 C C16 K6G . . . F 6 151.978 148.507 122.778 1 83.07 ? C16 K6G 901 R 1 
HETATM 9 C C17 K6G . . . F 6 152.192 148.685 124.281 1 83.07 ? C17 K6G 901 R 1 
HETATM 10 C C2 K6G . . . F 6 142.212 139.419 130.807 1 83.07 ? C2 K6G 901 R 1 
HETATM 11 C C3 K6G . . . F 6 143.441 139.95 130.066 1 83.07 ? C3 K6G 901 R 1 
HETATM 12 C C4 K6G . . . F 6 143.381 139.749 128.554 1 83.07 ? C4 K6G 901 R 1 
HETATM 13 C C5 K6G . . . F 6 144.622 140.285 127.849 1 83.07 ? C5 K6G 901 R 1 
HETATM 14 C C6 K6G . . . F 6 144.817 141.781 128.075 1 83.07 ? C6 K6G 901 R 1 
HETATM 15 C C7 K6G . . . F 6 146.232 142.228 127.719 1 83.07 ? C7 K6G 901 R 1 
HETATM 16 C C8 K6G . . . F 6 146.511 142.109 126.224 1 83.07 ? C8 K6G 901 R 1 
HETATM 17 C C9 K6G . . . F 6 146.63 143.472 125.548 1 83.07 ? C9 K6G 901 R 1 
HETATM 18 O O1 K6G . . . F 6 150.609 148.342 122.539 1 83.07 ? O1 K6G 901 R 1 
HETATM 19 O O6 K6G . . . F 6 152.738 147.497 124.784 1 83.07 ? O6 K6G 901 R 1 
HETATM 20 C C1 K6G . . . F 6 141.721 138.064 130.301 1 83.07 ? C1 K6G 901 R 1 
HETATM 21 C C18 K6G . . . F 6 140.362 138.144 129.605 1 83.07 ? C18 K6G 901 R 1 
HETATM 22 C C19 K6G . . . F 6 153.162 149.82 124.605 1 83.07 ? C19 K6G 901 R 1 
HETATM 23 O O2 K6G . . . F 6 152.944 150.237 125.925 1 83.07 ? O2 K6G 901 R 1 
HETATM 24 P P1 K6G . . . F 6 153.877 149.595 127.124 1 83.07 ? P1 K6G 901 R 1 
HETATM 25 O O4 K6G . . . F 6 154.682 148.443 126.573 1 83.07 ? O4 K6G 901 R 1 
HETATM 26 O O5 K6G . . . F 6 154.816 150.654 127.65 1 83.07 ? O5 K6G 901 R 1 
HETATM 27 O O3 K6G . . . F 6 152.913 149.062 128.354 1 83.07 ? O3 K6G 901 R 1 
HETATM 28 C C21 K6G . . . F 6 152.982 147.711 128.715 1 83.07 ? C21 K6G 901 R 1 
HETATM 29 C C22 K6G . . . F 6 152.012 147.47 129.874 1 83.07 ? C22 K6G 901 R 1 
HETATM 30 N N1 K6G . . . F 6 151.023 146.448 129.558 1 83.07 ? N1 K6G 901 R 1 
HETATM 31 C C24 K6G . . . F 6 151.64 145.305 128.903 1 83.07 ? C24 K6G 901 R 1 
HETATM 32 C C25 K6G . . . F 6 150.386 146.002 130.784 1 83.07 ? C25 K6G 901 R 1 
HETATM 33 C C26 K6G . . . F 6 150.018 147.018 128.679 1 83.07 ? C26 K6G 901 R 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           33 
#