data_7WWD # _model_server_result.job_id vrAwIxVX1I6hi7R2fa7xRg _model_server_result.datetime_utc '2024-11-28 23:07:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wwd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7WWD # _exptl.entry_id 7WWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 410.718 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.113 _cell.angle_gamma 90 _cell.entry_id 7WWD _cell.length_a 43.403 _cell.length_b 78.278 _cell.length_c 54.166 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H50' _chem_comp.formula_weight 410.718 _chem_comp.id SQL _chem_comp.mon_nstd_flag . _chem_comp.name (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms squalene # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 SQL sing 290 n n C1 C2 SQL sing 291 n n C2 C4 SQL doub 292 n n C4 C5 SQL sing 293 n n C5 C6 SQL sing 294 n n C6 C7 SQL sing 295 n n C8 C7 SQL sing 296 n n C7 C9 SQL doub 297 e n C9 C10 SQL sing 298 n n C10 C11 SQL sing 299 n n C11 C12 SQL sing 300 n n C13 C12 SQL sing 301 n n C12 C14 SQL doub 302 e n C14 C15 SQL sing 303 n n C15 C16 SQL sing 304 n n C16 C17 SQL sing 305 n n C17 C18 SQL doub 306 e n C18 C19 SQL sing 307 n n C18 C20 SQL sing 308 n n C20 C21 SQL sing 309 n n C21 C22 SQL sing 310 n n C22 C23 SQL doub 311 e n C23 C30 SQL sing 312 n n C23 C24 SQL sing 313 n n C24 C25 SQL sing 314 n n C25 C26 SQL sing 315 n n C26 C27 SQL doub 316 n n C27 C29 SQL sing 317 n n C27 C28 SQL sing 318 n n C1 H1 SQL sing 319 n n C1 H2 SQL sing 320 n n C1 H3 SQL sing 321 n n C3 H4 SQL sing 322 n n C3 H5 SQL sing 323 n n C3 H6 SQL sing 324 n n C4 H7 SQL sing 325 n n C5 H8 SQL sing 326 n n C6 H9 SQL sing 327 n n C8 H10 SQL sing 328 n n C8 H11 SQL sing 329 n n C8 H12 SQL sing 330 n n C9 H13 SQL sing 331 n n C10 H14 SQL sing 332 n n C11 H15 SQL sing 333 n n C13 H16 SQL sing 334 n n C13 H17 SQL sing 335 n n C13 H18 SQL sing 336 n n C14 H19 SQL sing 337 n n C15 H20 SQL sing 338 n n C15 H21 SQL sing 339 n n C16 H22 SQL sing 340 n n C17 H23 SQL sing 341 n n C19 H24 SQL sing 342 n n C19 H25 SQL sing 343 n n C19 H26 SQL sing 344 n n C20 H27 SQL sing 345 n n C21 H28 SQL sing 346 n n C22 H29 SQL sing 347 n n C24 H30 SQL sing 348 n n C25 H31 SQL sing 349 n n C25 H32 SQL sing 350 n n C26 H33 SQL sing 351 n n C28 H34 SQL sing 352 n n C28 H35 SQL sing 353 n n C28 H36 SQL sing 354 n n C29 H37 SQL sing 355 n n C29 H38 SQL sing 356 n n C29 H39 SQL sing 357 n n C30 H40 SQL sing 358 n n C30 H41 SQL sing 359 n n C30 H42 SQL sing 360 n n C5 H43 SQL sing 361 n n C6 H44 SQL sing 362 n n C10 H45 SQL sing 363 n n C11 H46 SQL sing 364 n n C16 H47 SQL sing 365 n n C20 H48 SQL sing 366 n n C21 H49 SQL sing 367 n n C24 H50 SQL sing 368 n n # _atom_sites.entry_id 7WWD _atom_sites.fract_transf_matrix[1][1] 0.02304 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001657 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018509 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SQL A 1 501 501 SQL SQL . C 3 HOH A 1 601 13 HOH HOH . C 3 HOH A 2 602 43 HOH HOH . C 3 HOH A 3 603 26 HOH HOH . C 3 HOH A 4 604 15 HOH HOH . C 3 HOH A 5 605 48 HOH HOH . C 3 HOH A 6 606 33 HOH HOH . C 3 HOH A 7 607 9 HOH HOH . C 3 HOH A 8 608 12 HOH HOH . C 3 HOH A 9 609 57 HOH HOH . C 3 HOH A 10 610 79 HOH HOH . C 3 HOH A 11 611 70 HOH HOH . C 3 HOH A 12 612 62 HOH HOH . C 3 HOH A 13 613 68 HOH HOH . C 3 HOH A 14 614 17 HOH HOH . C 3 HOH A 15 615 25 HOH HOH . C 3 HOH A 16 616 31 HOH HOH . C 3 HOH A 17 617 80 HOH HOH . C 3 HOH A 18 618 4 HOH HOH . C 3 HOH A 19 619 44 HOH HOH . C 3 HOH A 20 620 2 HOH HOH . C 3 HOH A 21 621 24 HOH HOH . C 3 HOH A 22 622 39 HOH HOH . C 3 HOH A 23 623 36 HOH HOH . C 3 HOH A 24 624 30 HOH HOH . C 3 HOH A 25 625 55 HOH HOH . C 3 HOH A 26 626 52 HOH HOH . C 3 HOH A 27 627 14 HOH HOH . C 3 HOH A 28 628 20 HOH HOH . C 3 HOH A 29 629 19 HOH HOH . C 3 HOH A 30 630 1 HOH HOH . C 3 HOH A 31 631 18 HOH HOH . C 3 HOH A 32 632 66 HOH HOH . C 3 HOH A 33 633 58 HOH HOH . C 3 HOH A 34 634 28 HOH HOH . C 3 HOH A 35 635 29 HOH HOH . C 3 HOH A 36 636 6 HOH HOH . C 3 HOH A 37 637 54 HOH HOH . C 3 HOH A 38 638 74 HOH HOH . C 3 HOH A 39 639 34 HOH HOH . C 3 HOH A 40 640 53 HOH HOH . C 3 HOH A 41 641 83 HOH HOH . C 3 HOH A 42 642 35 HOH HOH . C 3 HOH A 43 643 32 HOH HOH . C 3 HOH A 44 644 38 HOH HOH . C 3 HOH A 45 645 59 HOH HOH . C 3 HOH A 46 646 47 HOH HOH . C 3 HOH A 47 647 42 HOH HOH . C 3 HOH A 48 648 64 HOH HOH . C 3 HOH A 49 649 5 HOH HOH . C 3 HOH A 50 650 10 HOH HOH . C 3 HOH A 51 651 75 HOH HOH . C 3 HOH A 52 652 3 HOH HOH . C 3 HOH A 53 653 40 HOH HOH . C 3 HOH A 54 654 7 HOH HOH . C 3 HOH A 55 655 81 HOH HOH . C 3 HOH A 56 656 23 HOH HOH . C 3 HOH A 57 657 50 HOH HOH . C 3 HOH A 58 658 76 HOH HOH . C 3 HOH A 59 659 11 HOH HOH . C 3 HOH A 60 660 49 HOH HOH . C 3 HOH A 61 661 22 HOH HOH . C 3 HOH A 62 662 63 HOH HOH . C 3 HOH A 63 663 61 HOH HOH . C 3 HOH A 64 664 85 HOH HOH . C 3 HOH A 65 665 27 HOH HOH . C 3 HOH A 66 666 21 HOH HOH . C 3 HOH A 67 667 69 HOH HOH . C 3 HOH A 68 668 65 HOH HOH . C 3 HOH A 69 669 16 HOH HOH . C 3 HOH A 70 670 82 HOH HOH . C 3 HOH A 71 671 8 HOH HOH . C 3 HOH A 72 672 41 HOH HOH . C 3 HOH A 73 673 51 HOH HOH . C 3 HOH A 74 674 67 HOH HOH . C 3 HOH A 75 675 84 HOH HOH . C 3 HOH A 76 676 46 HOH HOH . C 3 HOH A 77 677 77 HOH HOH . C 3 HOH A 78 678 71 HOH HOH . C 3 HOH A 79 679 37 HOH HOH . C 3 HOH A 80 680 73 HOH HOH . C 3 HOH A 81 681 60 HOH HOH . C 3 HOH A 82 682 86 HOH HOH . C 3 HOH A 83 683 78 HOH HOH . C 3 HOH A 84 684 88 HOH HOH . C 3 HOH A 85 685 87 HOH HOH . C 3 HOH A 86 686 45 HOH HOH . C 3 HOH A 87 687 56 HOH HOH . C 3 HOH A 88 688 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SQL . . . B 2 -11.969 -15.115 -31.536 1 30.47 ? C1 SQL 501 A 1 HETATM 2 C C2 SQL . . . B 2 -13.177 -14.615 -32.247 1 31.98 ? C2 SQL 501 A 1 HETATM 3 C C3 SQL . . . B 2 -13.985 -13.666 -31.457 1 19.24 ? C3 SQL 501 A 1 HETATM 4 C C4 SQL . . . B 2 -13.528 -14.996 -33.465 1 34.22 ? C4 SQL 501 A 1 HETATM 5 C C5 SQL . . . B 2 -12.728 -15.017 -34.721 1 25.31 ? C5 SQL 501 A 1 HETATM 6 C C6 SQL . . . B 2 -13.003 -13.856 -35.645 1 30.53 ? C6 SQL 501 A 1 HETATM 7 C C7 SQL . . . B 2 -14.442 -13.565 -35.965 1 27.36 ? C7 SQL 501 A 1 HETATM 8 C C8 SQL . . . B 2 -15.337 -14.739 -36.128 1 25.98 ? C8 SQL 501 A 1 HETATM 9 C C9 SQL . . . B 2 -14.874 -12.323 -36.069 1 24.93 ? C9 SQL 501 A 1 HETATM 10 C C10 SQL . . . B 2 -14.631 -11.37 -37.166 1 33.73 ? C10 SQL 501 A 1 HETATM 11 C C11 SQL . . . B 2 -15.32 -11.783 -38.414 1 29.27 ? C11 SQL 501 A 1 HETATM 12 C C12 SQL . . . B 2 -16.123 -10.64 -38.937 1 28.6 ? C12 SQL 501 A 1 HETATM 13 C C13 SQL . . . B 2 -17.582 -10.736 -38.65 1 27.28 ? C13 SQL 501 A 1 HETATM 14 C C14 SQL . . . B 2 -15.525 -9.644 -39.573 1 29.69 ? C14 SQL 501 A 1 HETATM 15 C C15 SQL . . . B 2 -16.114 -8.478 -40.268 1 29.04 ? C15 SQL 501 A 1 HETATM 16 C C16 SQL . . . B 2 -15.527 -7.204 -39.744 1 29.43 ? C16 SQL 501 A 1 HETATM 17 C C17 SQL . . . B 2 -15.381 -7.145 -38.257 1 28.17 ? C17 SQL 501 A 1 HETATM 18 C C18 SQL . . . B 2 -15.183 -6.082 -37.495 1 33.52 ? C18 SQL 501 A 1 HETATM 19 C C19 SQL . . . B 2 -14.521 -4.853 -37.984 1 32.61 ? C19 SQL 501 A 1 HETATM 20 C C20 SQL . . . B 2 -15.58 -6.057 -36.044 1 30.7 ? C20 SQL 501 A 1 HETATM 21 C C21 SQL . . . B 2 -15.605 -4.667 -35.427 1 36.62 ? C21 SQL 501 A 1 HETATM 22 C C22 SQL . . . B 2 -15.782 -4.605 -33.947 1 36.52 ? C22 SQL 501 A 1 HETATM 23 C C23 SQL . . . B 2 -14.833 -4.561 -33.018 1 37.4 ? C23 SQL 501 A 1 HETATM 24 C C24 SQL . . . B 2 -15.039 -3.918 -31.683 1 31.74 ? C24 SQL 501 A 1 HETATM 25 C C25 SQL . . . B 2 -14.838 -4.893 -30.55 1 33.86 ? C25 SQL 501 A 1 HETATM 26 C C26 SQL . . . B 2 -15.653 -6.136 -30.667 1 28.38 ? C26 SQL 501 A 1 HETATM 27 C C27 SQL . . . B 2 -15.754 -7.143 -29.812 1 35.74 ? C27 SQL 501 A 1 HETATM 28 C C28 SQL . . . B 2 -15.859 -8.546 -30.254 1 23.6 ? C28 SQL 501 A 1 HETATM 29 C C29 SQL . . . B 2 -15.782 -6.982 -28.336 1 20.13 ? C29 SQL 501 A 1 HETATM 30 C C30 SQL . . . B 2 -13.504 -5.167 -33.185 1 38.09 ? C30 SQL 501 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #