data_7WWG # _model_server_result.job_id Dy3P6d9HWt3zSwbwo-IK0g _model_server_result.datetime_utc '2024-11-28 21:58:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wwg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7WWG # _exptl.entry_id 7WWG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 865.122 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R)-2-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WWG _cell.length_a 75.137 _cell.length_b 75.137 _cell.length_c 146.807 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C45 H85 O13 P' _chem_comp.formula_weight 865.122 _chem_comp.id B7N _chem_comp.mon_nstd_flag . _chem_comp.name '(1R)-2-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 B7N sing 70 n n C1 H1 B7N sing 71 n n C1 H1A B7N sing 72 n n C1 H1B B7N sing 73 n n C3 C2 B7N sing 74 n n C2 H2 B7N sing 75 n n C2 H2A B7N sing 76 n n C3 C4 B7N sing 77 n n C3 H3 B7N sing 78 n n C3 H3A B7N sing 79 n n C5 C4 B7N sing 80 n n C4 H4 B7N sing 81 n n C4 H4A B7N sing 82 n n O1 C26 B7N sing 83 n n O1 HO1 B7N sing 84 n n C41 O2 B7N sing 85 n n O2 HO2 B7N sing 86 n n C43 O3 B7N sing 87 n n O3 P B7N sing 88 n n C22 C21 B7N sing 89 n n C21 H21 B7N sing 90 n n C21 H21A B7N sing 91 n n C21 H21B B7N sing 92 n n C18 C22 B7N sing 93 n n C22 H22 B7N sing 94 n n C22 H22A B7N sing 95 n n C19 C18 B7N sing 96 n n C18 H18 B7N sing 97 n n C18 H18A B7N sing 98 n n C28 C19 B7N sing 99 n n C19 H19 B7N sing 100 n n C19 H19A B7N sing 101 n n C29 C28 B7N sing 102 n n C28 H28 B7N sing 103 n n C28 H28A B7N sing 104 n n C30 C29 B7N sing 105 n n C29 H29 B7N sing 106 n n C29 H29A B7N sing 107 n n C31 C30 B7N sing 108 n n C30 H30 B7N sing 109 n n C30 H30A B7N sing 110 n n C32 C31 B7N sing 111 n n C31 H31 B7N sing 112 n n C31 H31A B7N sing 113 n n C33 C32 B7N sing 114 n n C32 H32 B7N sing 115 n n C32 H32A B7N sing 116 n n C34 C33 B7N sing 117 n n C33 H33 B7N sing 118 n n C33 H33A B7N sing 119 n n C35 C34 B7N sing 120 n n C34 H34 B7N sing 121 n n C34 H34A B7N sing 122 n n C36 C35 B7N sing 123 n n C35 H35 B7N sing 124 n n C35 H35A B7N sing 125 n n C37 C36 B7N sing 126 n n C36 H36 B7N sing 127 n n C36 H36A B7N sing 128 n n C38 C37 B7N sing 129 n n C37 H37 B7N sing 130 n n C37 H37A B7N sing 131 n n C39 C38 B7N sing 132 n n C38 H38 B7N sing 133 n n C38 H38A B7N sing 134 n n C40 C39 B7N sing 135 n n C39 H39 B7N sing 136 n n C39 H39A B7N sing 137 n n C42 C40 B7N sing 138 n n C40 H40 B7N sing 139 n n C40 H40A B7N sing 140 n n O7 C42 B7N doub 141 n n O9 C42 B7N sing 142 n n C45 O9 B7N sing 143 n n C15 C45 B7N sing 144 n n C45 H45 B7N sing 145 n n C45 H45A B7N sing 146 n n C16 C15 B7N sing 147 n n C15 O8 B7N sing 148 n n C15 H15 B7N sing 149 n n O10 C16 B7N sing 150 n n C16 H16 B7N sing 151 n n C16 H16A B7N sing 152 n n P O10 B7N sing 153 n n O4 P B7N doub 154 n n P O5 B7N sing 155 n n O5 HO5 B7N sing 156 n n C44 C43 B7N sing 157 n n C41 C43 B7N sing 158 n n C43 H43 B7N sing 159 n n C26 C41 B7N sing 160 n n C41 H41 B7N sing 161 n n C17 C26 B7N sing 162 n n C26 H26 B7N sing 163 n n O13 C17 B7N sing 164 n n C17 C20 B7N sing 165 n n C17 H17 B7N sing 166 n n O13 HO13 B7N sing 167 n n O12 C20 B7N sing 168 n n C20 C44 B7N sing 169 n n C20 H20 B7N sing 170 n n O12 HO12 B7N sing 171 n n O11 C44 B7N sing 172 n n C44 H44 B7N sing 173 n n O11 HO11 B7N sing 174 n n O8 C27 B7N sing 175 n n O6 C27 B7N doub 176 n n C27 C25 B7N sing 177 n n C25 C24 B7N sing 178 n n C25 H25 B7N sing 179 n n C25 H25A B7N sing 180 n n C24 C23 B7N sing 181 n n C24 H24 B7N sing 182 n n C24 H24A B7N sing 183 n n C23 C14 B7N sing 184 n n C23 H23 B7N sing 185 n n C23 H23A B7N sing 186 n n C14 C13 B7N sing 187 n n C14 H14 B7N sing 188 n n C14 H14A B7N sing 189 n n C13 C12 B7N sing 190 n n C13 H13 B7N sing 191 n n C13 H13A B7N sing 192 n n C12 C11 B7N sing 193 n n C12 H12 B7N sing 194 n n C12 H12A B7N sing 195 n n C11 C10 B7N sing 196 n n C11 H11 B7N sing 197 n n C11 H11A B7N sing 198 z n C10 C9 B7N doub 199 n n C10 H10 B7N sing 200 n n C8 C9 B7N sing 201 n n C9 H9 B7N sing 202 n n C8 C7 B7N sing 203 n n C8 H8 B7N sing 204 n n C8 H8A B7N sing 205 n n C7 C6 B7N sing 206 n n C7 H7 B7N sing 207 n n C7 H7A B7N sing 208 n n C6 C5 B7N sing 209 n n C6 H6 B7N sing 210 n n C6 H6A B7N sing 211 n n C5 H5 B7N sing 212 n n C5 H5A B7N sing 213 n n # _atom_sites.entry_id 7WWG _atom_sites.fract_transf_matrix[1][1] 0.013309 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013309 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id B7N _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id B7N _pdbx_nonpoly_scheme.auth_mon_id B7N _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B7N . . . B 2 -1.983 18.627 0.663 1 154.44 ? C1 B7N 501 A 1 HETATM 2 C C2 B7N . . . B 2 -2.129 19.982 1.357 1 146.91 ? C2 B7N 501 A 1 HETATM 3 C C3 B7N . . . B 2 -2.361 19.879 2.871 1 137.85 ? C3 B7N 501 A 1 HETATM 4 C C4 B7N . . . B 2 -3.28 20.986 3.404 1 127.62 ? C4 B7N 501 A 1 HETATM 5 O O1 B7N . . . B 2 15.36 29.14 5.714 1 108.92 ? O1 B7N 501 A 1 HETATM 6 O O2 B7N . . . B 2 13.405 28.696 7.791 1 100.78 ? O2 B7N 501 A 1 HETATM 7 O O3 B7N . . . B 2 13.885 27.032 9.837 1 101.34 ? O3 B7N 501 A 1 HETATM 8 C C21 B7N . . . B 2 5.581 19.5 4.836 1 152.46 ? C21 B7N 501 A 1 HETATM 9 C C22 B7N . . . B 2 5.062 18.374 5.728 1 157.27 ? C22 B7N 501 A 1 HETATM 10 C C18 B7N . . . B 2 4.735 17.109 4.929 1 166.42 ? C18 B7N 501 A 1 HETATM 11 C C19 B7N . . . B 2 3.435 16.438 5.384 1 170.97 ? C19 B7N 501 A 1 HETATM 12 C C28 B7N . . . B 2 2.581 15.889 4.236 1 177.52 ? C28 B7N 501 A 1 HETATM 13 C C29 B7N . . . B 2 1.294 16.671 3.954 1 177.4 ? C29 B7N 501 A 1 HETATM 14 C C30 B7N . . . B 2 1.281 17.46 2.641 1 178 ? C30 B7N 501 A 1 HETATM 15 C C31 B7N . . . B 2 2.261 18.636 2.608 1 170.64 ? C31 B7N 501 A 1 HETATM 16 C C32 B7N . . . B 2 2.221 19.512 3.861 1 160.39 ? C32 B7N 501 A 1 HETATM 17 C C33 B7N . . . B 2 1.878 20.976 3.614 1 153.3 ? C33 B7N 501 A 1 HETATM 18 C C34 B7N . . . B 2 2.055 21.798 4.888 1 144.42 ? C34 B7N 501 A 1 HETATM 19 C C35 B7N . . . B 2 2.909 23.033 4.616 1 141.2 ? C35 B7N 501 A 1 HETATM 20 C C36 B7N . . . B 2 3.458 23.677 5.889 1 131.55 ? C36 B7N 501 A 1 HETATM 21 C C37 B7N . . . B 2 3.763 22.66 6.994 1 135.45 ? C37 B7N 501 A 1 HETATM 22 C C38 B7N . . . B 2 5.225 22.204 7.093 1 122.79 ? C38 B7N 501 A 1 HETATM 23 C C39 B7N . . . B 2 6.155 22.89 6.094 1 122.91 ? C39 B7N 501 A 1 HETATM 24 C C40 B7N . . . B 2 7.484 22.172 5.906 1 116.6 ? C40 B7N 501 A 1 HETATM 25 C C42 B7N . . . B 2 8.517 22.771 6.84 1 121.98 ? C42 B7N 501 A 1 HETATM 26 O O7 B7N . . . B 2 8.323 22.585 7.998 1 120.19 ? O7 B7N 501 A 1 HETATM 27 O O9 B7N . . . B 2 9.607 23.511 6.291 1 114.23 ? O9 B7N 501 A 1 HETATM 28 C C45 B7N . . . B 2 10.62 24.019 7.12 1 104.39 ? C45 B7N 501 A 1 HETATM 29 C C15 B7N . . . B 2 10.142 25.377 7.643 1 116.92 ? C15 B7N 501 A 1 HETATM 30 C C16 B7N . . . B 2 11.376 26.068 8.25 1 106.73 ? C16 B7N 501 A 1 HETATM 31 O O10 B7N . . . B 2 12.289 25.141 8.777 1 99.25 ? O10 B7N 501 A 1 HETATM 32 P P B7N . . . B 2 13.12 25.6 10.14 1 98.55 ? P B7N 501 A 1 HETATM 33 O O4 B7N . . . B 2 14.17 24.58 10.519 1 95.16 ? O4 B7N 501 A 1 HETATM 34 O O5 B7N . . . B 2 12.213 25.735 11.343 1 92.79 ? O5 B7N 501 A 1 HETATM 35 C C43 B7N . . . B 2 14.84 27.064 8.785 1 104.02 ? C43 B7N 501 A 1 HETATM 36 C C41 B7N . . . B 2 14.761 28.373 7.986 1 104.29 ? C41 B7N 501 A 1 HETATM 37 C C26 B7N . . . B 2 15.504 28.103 6.667 1 102.57 ? C26 B7N 501 A 1 HETATM 38 C C17 B7N . . . B 2 16.985 27.823 6.968 1 99.21 ? C17 B7N 501 A 1 HETATM 39 O O13 B7N . . . B 2 17.612 27.493 5.767 1 111.97 ? O13 B7N 501 A 1 HETATM 40 C C20 B7N . . . B 2 17.194 26.633 7.928 1 105.44 ? C20 B7N 501 A 1 HETATM 41 O O12 B7N . . . B 2 18.574 26.455 8.229 1 106.4 ? O12 B7N 501 A 1 HETATM 42 C C44 B7N . . . B 2 16.303 26.745 9.195 1 102.54 ? C44 B7N 501 A 1 HETATM 43 O O11 B7N . . . B 2 16.823 27.727 10.065 1 96.92 ? O11 B7N 501 A 1 HETATM 44 O O8 B7N . . . B 2 9.031 25.202 8.532 1 126.08 ? O8 B7N 501 A 1 HETATM 45 C C27 B7N . . . B 2 8.323 26.255 9.18 1 113.01 ? C27 B7N 501 A 1 HETATM 46 O O6 B7N . . . B 2 8.341 27.366 8.792 1 114.16 ? O6 B7N 501 A 1 HETATM 47 C C25 B7N . . . B 2 7.482 25.966 10.418 1 91.63 ? C25 B7N 501 A 1 HETATM 48 C C24 B7N . . . B 2 6.221 25.214 10.007 1 110.31 ? C24 B7N 501 A 1 HETATM 49 C C23 B7N . . . B 2 4.965 26.095 9.888 1 113.84 ? C23 B7N 501 A 1 HETATM 50 C C14 B7N . . . B 2 3.744 25.342 9.319 1 118.95 ? C14 B7N 501 A 1 HETATM 51 C C13 B7N . . . B 2 2.35 25.97 9.522 1 113.17 ? C13 B7N 501 A 1 HETATM 52 C C12 B7N . . . B 2 1.296 24.996 10.084 1 104.26 ? C12 B7N 501 A 1 HETATM 53 C C11 B7N . . . B 2 0.163 24.614 9.123 1 86.47 ? C11 B7N 501 A 1 HETATM 54 C C10 B7N . . . B 2 -0.548 25.559 8.56 1 85.05 ? C10 B7N 501 A 1 HETATM 55 C C9 B7N . . . B 2 -1.676 25.226 7.606 1 81.88 ? C9 B7N 501 A 1 HETATM 56 C C8 B7N . . . B 2 -1.746 23.754 7.229 1 92.83 ? C8 B7N 501 A 1 HETATM 57 C C7 B7N . . . B 2 -2.979 23.463 6.364 1 96.67 ? C7 B7N 501 A 1 HETATM 58 C C6 B7N . . . B 2 -2.701 22.977 4.935 1 105 ? C6 B7N 501 A 1 HETATM 59 C C5 B7N . . . B 2 -2.936 21.464 4.817 1 118.58 ? C5 B7N 501 A 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 59 #