data_7WX2 # _model_server_result.job_id '_U-pJgf7i0ebojaCgDSrFA' _model_server_result.datetime_utc '2024-10-18 04:24:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wx2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 7WX2 # _exptl.entry_id 7WX2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 435.439 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-dimethyl-5-[2-(oxan-4-yl)-3-[2-(trifluoromethyloxy)ethyl]benzimidazol-5-yl]pyridin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WX2 _cell.length_a 34.301 _cell.length_b 49.745 _cell.length_c 80.839 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WX2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H24 F3 N3 O3' _chem_comp.formula_weight 435.439 _chem_comp.id 7OW _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-dimethyl-5-[2-(oxan-4-yl)-3-[2-(trifluoromethyloxy)ethyl]benzimidazol-5-yl]pyridin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 N3 7OW sing 1 n n N3 C20 7OW sing 2 n n N3 C22 7OW sing 3 n n C20 C4 7OW doub 4 n n C6 C7 7OW doub 5 n y C6 C5 7OW sing 6 n y O3 C22 7OW doub 7 n n C7 C8 7OW sing 8 n y C22 C2 7OW sing 9 n n C4 C5 7OW sing 10 n n C4 C3 7OW sing 11 n n C2 C3 7OW doub 12 n n C2 C1 7OW sing 13 n n C5 C19 7OW doub 14 n y C8 N1 7OW sing 15 n y C8 C18 7OW doub 16 n y N1 C9 7OW doub 17 n y C19 C18 7OW sing 18 n y C18 N2 7OW sing 19 n y C9 N2 7OW sing 20 n y C9 C10 7OW sing 21 n n C11 C10 7OW sing 22 n n C11 C12 7OW sing 23 n n N2 C15 7OW sing 24 n n C14 C10 7OW sing 25 n n C14 C13 7OW sing 26 n n O1 C12 7OW sing 27 n n O1 C13 7OW sing 28 n n C15 C16 7OW sing 29 n n O2 C16 7OW sing 30 n n O2 C17 7OW sing 31 n n F2 C17 7OW sing 32 n n C17 F1 7OW sing 33 n n C17 F3 7OW sing 34 n n C14 H1 7OW sing 35 n n C14 H2 7OW sing 36 n n C6 H3 7OW sing 37 n n C11 H4 7OW sing 38 n n C11 H5 7OW sing 39 n n C7 H6 7OW sing 40 n n C10 H7 7OW sing 41 n n C12 H8 7OW sing 42 n n C12 H9 7OW sing 43 n n C13 H10 7OW sing 44 n n C13 H11 7OW sing 45 n n C3 H12 7OW sing 46 n n C1 H13 7OW sing 47 n n C1 H14 7OW sing 48 n n C1 H15 7OW sing 49 n n C15 H16 7OW sing 50 n n C15 H17 7OW sing 51 n n C16 H18 7OW sing 52 n n C16 H19 7OW sing 53 n n C19 H20 7OW sing 54 n n C20 H21 7OW sing 55 n n C21 H22 7OW sing 56 n n C21 H23 7OW sing 57 n n C21 H24 7OW sing 58 n n # _atom_sites.entry_id 7WX2 _atom_sites.fract_transf_matrix[1][1] 0.029154 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7OW A 1 1201 1201 7OW DRG . C 3 HOH A 1 1301 171 HOH HOH . C 3 HOH A 2 1302 53 HOH HOH . C 3 HOH A 3 1303 200 HOH HOH . C 3 HOH A 4 1304 157 HOH HOH . C 3 HOH A 5 1305 174 HOH HOH . C 3 HOH A 6 1306 103 HOH HOH . C 3 HOH A 7 1307 131 HOH HOH . C 3 HOH A 8 1308 21 HOH HOH . C 3 HOH A 9 1309 162 HOH HOH . C 3 HOH A 10 1310 154 HOH HOH . C 3 HOH A 11 1311 73 HOH HOH . C 3 HOH A 12 1312 20 HOH HOH . C 3 HOH A 13 1313 115 HOH HOH . C 3 HOH A 14 1314 81 HOH HOH . C 3 HOH A 15 1315 65 HOH HOH . C 3 HOH A 16 1316 45 HOH HOH . C 3 HOH A 17 1317 106 HOH HOH . C 3 HOH A 18 1318 78 HOH HOH . C 3 HOH A 19 1319 4 HOH HOH . C 3 HOH A 20 1320 13 HOH HOH . C 3 HOH A 21 1321 55 HOH HOH . C 3 HOH A 22 1322 138 HOH HOH . C 3 HOH A 23 1323 63 HOH HOH . C 3 HOH A 24 1324 164 HOH HOH . C 3 HOH A 25 1325 152 HOH HOH . C 3 HOH A 26 1326 77 HOH HOH . C 3 HOH A 27 1327 16 HOH HOH . C 3 HOH A 28 1328 38 HOH HOH . C 3 HOH A 29 1329 80 HOH HOH . C 3 HOH A 30 1330 192 HOH HOH . C 3 HOH A 31 1331 6 HOH HOH . C 3 HOH A 32 1332 39 HOH HOH . C 3 HOH A 33 1333 1 HOH HOH . C 3 HOH A 34 1334 19 HOH HOH . C 3 HOH A 35 1335 139 HOH HOH . C 3 HOH A 36 1336 10 HOH HOH . C 3 HOH A 37 1337 67 HOH HOH . C 3 HOH A 38 1338 32 HOH HOH . C 3 HOH A 39 1339 195 HOH HOH . C 3 HOH A 40 1340 15 HOH HOH . C 3 HOH A 41 1341 50 HOH HOH . C 3 HOH A 42 1342 11 HOH HOH . C 3 HOH A 43 1343 46 HOH HOH . C 3 HOH A 44 1344 42 HOH HOH . C 3 HOH A 45 1345 158 HOH HOH . C 3 HOH A 46 1346 35 HOH HOH . C 3 HOH A 47 1347 56 HOH HOH . C 3 HOH A 48 1348 40 HOH HOH . C 3 HOH A 49 1349 8 HOH HOH . C 3 HOH A 50 1350 87 HOH HOH . C 3 HOH A 51 1351 25 HOH HOH . C 3 HOH A 52 1352 7 HOH HOH . C 3 HOH A 53 1353 155 HOH HOH . C 3 HOH A 54 1354 89 HOH HOH . C 3 HOH A 55 1355 26 HOH HOH . C 3 HOH A 56 1356 91 HOH HOH . C 3 HOH A 57 1357 178 HOH HOH . C 3 HOH A 58 1358 124 HOH HOH . C 3 HOH A 59 1359 33 HOH HOH . C 3 HOH A 60 1360 70 HOH HOH . C 3 HOH A 61 1361 49 HOH HOH . C 3 HOH A 62 1362 112 HOH HOH . C 3 HOH A 63 1363 29 HOH HOH . C 3 HOH A 64 1364 98 HOH HOH . C 3 HOH A 65 1365 95 HOH HOH . C 3 HOH A 66 1366 147 HOH HOH . C 3 HOH A 67 1367 94 HOH HOH . C 3 HOH A 68 1368 83 HOH HOH . C 3 HOH A 69 1369 140 HOH HOH . C 3 HOH A 70 1370 161 HOH HOH . C 3 HOH A 71 1371 14 HOH HOH . C 3 HOH A 72 1372 9 HOH HOH . C 3 HOH A 73 1373 79 HOH HOH . C 3 HOH A 74 1374 142 HOH HOH . C 3 HOH A 75 1375 5 HOH HOH . C 3 HOH A 76 1376 27 HOH HOH . C 3 HOH A 77 1377 52 HOH HOH . C 3 HOH A 78 1378 68 HOH HOH . C 3 HOH A 79 1379 43 HOH HOH . C 3 HOH A 80 1380 99 HOH HOH . C 3 HOH A 81 1381 122 HOH HOH . C 3 HOH A 82 1382 18 HOH HOH . C 3 HOH A 83 1383 64 HOH HOH . C 3 HOH A 84 1384 97 HOH HOH . C 3 HOH A 85 1385 17 HOH HOH . C 3 HOH A 86 1386 34 HOH HOH . C 3 HOH A 87 1387 59 HOH HOH . C 3 HOH A 88 1388 145 HOH HOH . C 3 HOH A 89 1389 71 HOH HOH . C 3 HOH A 90 1390 62 HOH HOH . C 3 HOH A 91 1391 41 HOH HOH . C 3 HOH A 92 1392 84 HOH HOH . C 3 HOH A 93 1393 30 HOH HOH . C 3 HOH A 94 1394 2 HOH HOH . C 3 HOH A 95 1395 113 HOH HOH . C 3 HOH A 96 1396 82 HOH HOH . C 3 HOH A 97 1397 129 HOH HOH . C 3 HOH A 98 1398 148 HOH HOH . C 3 HOH A 99 1399 54 HOH HOH . C 3 HOH A 100 1400 23 HOH HOH . C 3 HOH A 101 1401 102 HOH HOH . C 3 HOH A 102 1402 170 HOH HOH . C 3 HOH A 103 1403 194 HOH HOH . C 3 HOH A 104 1404 126 HOH HOH . C 3 HOH A 105 1405 136 HOH HOH . C 3 HOH A 106 1406 31 HOH HOH . C 3 HOH A 107 1407 61 HOH HOH . C 3 HOH A 108 1408 108 HOH HOH . C 3 HOH A 109 1409 48 HOH HOH . C 3 HOH A 110 1410 125 HOH HOH . C 3 HOH A 111 1411 190 HOH HOH . C 3 HOH A 112 1412 143 HOH HOH . C 3 HOH A 113 1413 92 HOH HOH . C 3 HOH A 114 1414 202 HOH HOH . C 3 HOH A 115 1415 189 HOH HOH . C 3 HOH A 116 1416 12 HOH HOH . C 3 HOH A 117 1417 172 HOH HOH . C 3 HOH A 118 1418 191 HOH HOH . C 3 HOH A 119 1419 24 HOH HOH . C 3 HOH A 120 1420 130 HOH HOH . C 3 HOH A 121 1421 198 HOH HOH . C 3 HOH A 122 1422 3 HOH HOH . C 3 HOH A 123 1423 137 HOH HOH . C 3 HOH A 124 1424 74 HOH HOH . C 3 HOH A 125 1425 96 HOH HOH . C 3 HOH A 126 1426 128 HOH HOH . C 3 HOH A 127 1427 196 HOH HOH . C 3 HOH A 128 1428 134 HOH HOH . C 3 HOH A 129 1429 193 HOH HOH . C 3 HOH A 130 1430 28 HOH HOH . C 3 HOH A 131 1431 111 HOH HOH . C 3 HOH A 132 1432 116 HOH HOH . C 3 HOH A 133 1433 199 HOH HOH . C 3 HOH A 134 1434 197 HOH HOH . C 3 HOH A 135 1435 201 HOH HOH . C 3 HOH A 136 1436 156 HOH HOH . C 3 HOH A 137 1437 36 HOH HOH . C 3 HOH A 138 1438 132 HOH HOH . C 3 HOH A 139 1439 118 HOH HOH . C 3 HOH A 140 1440 187 HOH HOH . C 3 HOH A 141 1441 181 HOH HOH . C 3 HOH A 142 1442 182 HOH HOH . C 3 HOH A 143 1443 72 HOH HOH . C 3 HOH A 144 1444 127 HOH HOH . C 3 HOH A 145 1445 47 HOH HOH . C 3 HOH A 146 1446 159 HOH HOH . C 3 HOH A 147 1447 101 HOH HOH . C 3 HOH A 148 1448 85 HOH HOH . C 3 HOH A 149 1449 166 HOH HOH . C 3 HOH A 150 1450 121 HOH HOH . C 3 HOH A 151 1451 60 HOH HOH . C 3 HOH A 152 1452 110 HOH HOH . C 3 HOH A 153 1453 203 HOH HOH . C 3 HOH A 154 1454 184 HOH HOH . C 3 HOH A 155 1455 175 HOH HOH . C 3 HOH A 156 1456 163 HOH HOH . C 3 HOH A 157 1457 117 HOH HOH . C 3 HOH A 158 1458 37 HOH HOH . C 3 HOH A 159 1459 105 HOH HOH . C 3 HOH A 160 1460 66 HOH HOH . C 3 HOH A 161 1461 22 HOH HOH . C 3 HOH A 162 1462 186 HOH HOH . C 3 HOH A 163 1463 76 HOH HOH . C 3 HOH A 164 1464 153 HOH HOH . C 3 HOH A 165 1465 180 HOH HOH . C 3 HOH A 166 1466 100 HOH HOH . C 3 HOH A 167 1467 176 HOH HOH . C 3 HOH A 168 1468 90 HOH HOH . C 3 HOH A 169 1469 86 HOH HOH . C 3 HOH A 170 1470 135 HOH HOH . C 3 HOH A 171 1471 141 HOH HOH . C 3 HOH A 172 1472 44 HOH HOH . C 3 HOH A 173 1473 120 HOH HOH . C 3 HOH A 174 1474 119 HOH HOH . C 3 HOH A 175 1475 104 HOH HOH . C 3 HOH A 176 1476 58 HOH HOH . C 3 HOH A 177 1477 177 HOH HOH . C 3 HOH A 178 1478 57 HOH HOH . C 3 HOH A 179 1479 69 HOH HOH . C 3 HOH A 180 1480 160 HOH HOH . C 3 HOH A 181 1481 75 HOH HOH . C 3 HOH A 182 1482 107 HOH HOH . C 3 HOH A 183 1483 169 HOH HOH . C 3 HOH A 184 1484 167 HOH HOH . C 3 HOH A 185 1485 168 HOH HOH . C 3 HOH A 186 1486 109 HOH HOH . C 3 HOH A 187 1487 150 HOH HOH . C 3 HOH A 188 1488 165 HOH HOH . C 3 HOH A 189 1489 93 HOH HOH . C 3 HOH A 190 1490 179 HOH HOH . C 3 HOH A 191 1491 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 7OW . . . B 2 -3.651 -1.201 -2.362 1 8.85 ? C4 7OW 1201 A 1 HETATM 2 C C14 7OW . . . B 2 4.389 -0.656 -2.285 1 23.06 ? C14 7OW 1201 A 1 HETATM 3 C C5 7OW . . . B 2 -2.266 -1.028 -1.882 1 9.19 ? C5 7OW 1201 A 1 HETATM 4 C C6 7OW . . . B 2 -2.006 -0.268 -0.706 1 10.79 ? C6 7OW 1201 A 1 HETATM 5 C C11 7OW . . . B 2 4.289 -2.289 -0.288 1 21.98 ? C11 7OW 1201 A 1 HETATM 6 C C7 7OW . . . B 2 -0.735 -0.157 -0.175 1 11.42 ? C7 7OW 1201 A 1 HETATM 7 C C8 7OW . . . B 2 0.307 -0.762 -0.858 1 10.83 ? C8 7OW 1201 A 1 HETATM 8 C C9 7OW . . . B 2 2.216 -1.57 -1.501 1 14.14 ? C9 7OW 1201 A 1 HETATM 9 C C10 7OW . . . B 2 3.691 -1.858 -1.632 1 18.23 ? C10 7OW 1201 A 1 HETATM 10 C C12 7OW . . . B 2 5.511 -1.484 0.08 1 33.87 ? C12 7OW 1201 A 1 HETATM 11 C C13 7OW . . . B 2 5.896 -0.557 -2.072 1 26.43 ? C13 7OW 1201 A 1 HETATM 12 N N1 7OW . . . B 2 1.684 -0.81 -0.572 1 12.91 ? N1 7OW 1201 A 1 HETATM 13 N N2 7OW . . . B 2 1.289 -1.996 -2.411 1 12.2 ? N2 7OW 1201 A 1 HETATM 14 C C3 7OW . . . B 2 -4.68 -1.476 -1.445 1 8.75 ? C3 7OW 1201 A 1 HETATM 15 N N3 7OW . . . B 2 -5.246 -1.293 -4.109 1 9.11 ? N3 7OW 1201 A 1 HETATM 16 C C1 7OW . . . B 2 -7.028 -1.988 -0.868 1 8.82 ? C1 7OW 1201 A 1 HETATM 17 C C2 7OW . . . B 2 -5.937 -1.705 -1.859 1 7.26 ? C2 7OW 1201 A 1 HETATM 18 O O1 7OW . . . B 2 6.377 -1.412 -1.042 1 27.97 ? O1 7OW 1201 A 1 HETATM 19 C C15 7OW . . . B 2 1.49 -2.845 -3.581 1 12.36 ? C15 7OW 1201 A 1 HETATM 20 C C16 7OW . . . B 2 0.985 -4.234 -3.32 1 14.22 ? C16 7OW 1201 A 1 HETATM 21 O O2 7OW . . . B 2 1.791 -4.834 -2.303 1 14.81 ? O2 7OW 1201 A 1 HETATM 22 C C17 7OW . . . B 2 1.247 -5.805 -1.547 1 16.36 ? C17 7OW 1201 A 1 HETATM 23 F F1 7OW . . . B 2 0.393 -5.214 -0.724 1 20.01 ? F1 7OW 1201 A 1 HETATM 24 F F2 7OW . . . B 2 0.663 -6.725 -2.197 1 16.19 ? F2 7OW 1201 A 1 HETATM 25 F F3 7OW . . . B 2 2.147 -6.375 -0.803 1 19.48 ? F3 7OW 1201 A 1 HETATM 26 C C18 7OW . . . B 2 0.064 -1.496 -2.008 1 10.63 ? C18 7OW 1201 A 1 HETATM 27 C C19 7OW . . . B 2 -1.207 -1.654 -2.522 1 10.27 ? C19 7OW 1201 A 1 HETATM 28 C C20 7OW . . . B 2 -3.943 -1.167 -3.685 1 9.03 ? C20 7OW 1201 A 1 HETATM 29 C C21 7OW . . . B 2 -5.554 -1.199 -5.545 1 9.3 ? C21 7OW 1201 A 1 HETATM 30 C C22 7OW . . . B 2 -6.283 -1.632 -3.228 1 8.31 ? C22 7OW 1201 A 1 HETATM 31 O O3 7OW . . . B 2 -7.408 -1.873 -3.658 1 8.42 ? O3 7OW 1201 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #