data_7WX6 # _model_server_result.job_id g6h891Cf0_m82uzGN8eraA _model_server_result.datetime_utc '2024-12-01 10:41:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7WX6 # _exptl.entry_id 7WX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHLORAMPHENICOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WX6 _cell.length_a 72.047 _cell.length_b 84.525 _cell.length_c 105.547 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 Cl2 N2 O5' _chem_comp.formula_weight 323.129 _chem_comp.id CLM _chem_comp.mon_nstd_flag . _chem_comp.name CHLORAMPHENICOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 CL1 CLM sing 70 n n C1 CL2 CLM sing 71 n n C1 C2 CLM sing 72 n n C1 H1 CLM sing 73 n n C2 O2 CLM doub 74 n n C2 N2 CLM sing 75 n n N2 C3 CLM sing 76 n n N2 HN2 CLM sing 77 n n C3 C4 CLM sing 78 n n C3 C5 CLM sing 79 n n C3 H3 CLM sing 80 n n C4 O4 CLM sing 81 n n C4 H41 CLM sing 82 n n C4 H42 CLM sing 83 n n O4 HO4 CLM sing 84 n n C5 O5 CLM sing 85 n n C5 C6 CLM sing 86 n n C5 H5 CLM sing 87 n n O5 HO5 CLM sing 88 n n C6 C7 CLM doub 89 n y C6 C11 CLM sing 90 n y C7 C8 CLM sing 91 n y C7 H7 CLM sing 92 n n C8 C9 CLM doub 93 n y C8 H8 CLM sing 94 n n C9 N9 CLM sing 95 n n C9 C10 CLM sing 96 n y N9 O9A CLM sing 97 n n N9 O9B CLM doub 98 n n C10 C11 CLM doub 99 n y C10 H10 CLM sing 100 n n C11 H11 CLM sing 101 n n # _atom_sites.entry_id 7WX6 _atom_sites.fract_transf_matrix[1][1] 0.01388 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 301 1 COA COA . C 2 COA A 1 302 2 COA COA . D 3 CLM A 1 303 1 CLM CLM . E 4 HOH A 1 401 81 HOH HOH . E 4 HOH A 2 402 7 HOH HOH . E 4 HOH A 3 403 60 HOH HOH . E 4 HOH A 4 404 116 HOH HOH . E 4 HOH A 5 405 25 HOH HOH . E 4 HOH A 6 406 101 HOH HOH . E 4 HOH A 7 407 57 HOH HOH . E 4 HOH A 8 408 8 HOH HOH . E 4 HOH A 9 409 11 HOH HOH . E 4 HOH A 10 410 45 HOH HOH . E 4 HOH A 11 411 35 HOH HOH . E 4 HOH A 12 412 20 HOH HOH . E 4 HOH A 13 413 21 HOH HOH . E 4 HOH A 14 414 1 HOH HOH . E 4 HOH A 15 415 31 HOH HOH . E 4 HOH A 16 416 23 HOH HOH . E 4 HOH A 17 417 39 HOH HOH . E 4 HOH A 18 418 6 HOH HOH . E 4 HOH A 19 419 22 HOH HOH . E 4 HOH A 20 420 15 HOH HOH . E 4 HOH A 21 421 30 HOH HOH . E 4 HOH A 22 422 18 HOH HOH . E 4 HOH A 23 423 29 HOH HOH . E 4 HOH A 24 424 92 HOH HOH . E 4 HOH A 25 425 80 HOH HOH . E 4 HOH A 26 426 5 HOH HOH . E 4 HOH A 27 427 32 HOH HOH . E 4 HOH A 28 428 61 HOH HOH . E 4 HOH A 29 429 17 HOH HOH . E 4 HOH A 30 430 12 HOH HOH . E 4 HOH A 31 431 94 HOH HOH . E 4 HOH A 32 432 2 HOH HOH . E 4 HOH A 33 433 73 HOH HOH . E 4 HOH A 34 434 3 HOH HOH . E 4 HOH A 35 435 42 HOH HOH . E 4 HOH A 36 436 111 HOH HOH . E 4 HOH A 37 437 59 HOH HOH . E 4 HOH A 38 438 19 HOH HOH . E 4 HOH A 39 439 13 HOH HOH . E 4 HOH A 40 440 64 HOH HOH . E 4 HOH A 41 441 109 HOH HOH . E 4 HOH A 42 442 99 HOH HOH . E 4 HOH A 43 443 26 HOH HOH . E 4 HOH A 44 444 71 HOH HOH . E 4 HOH A 45 445 9 HOH HOH . E 4 HOH A 46 446 46 HOH HOH . E 4 HOH A 47 447 24 HOH HOH . E 4 HOH A 48 448 16 HOH HOH . E 4 HOH A 49 449 88 HOH HOH . E 4 HOH A 50 450 62 HOH HOH . E 4 HOH A 51 451 51 HOH HOH . E 4 HOH A 52 452 79 HOH HOH . E 4 HOH A 53 453 40 HOH HOH . E 4 HOH A 54 454 53 HOH HOH . E 4 HOH A 55 455 63 HOH HOH . E 4 HOH A 56 456 47 HOH HOH . E 4 HOH A 57 457 67 HOH HOH . E 4 HOH A 58 458 27 HOH HOH . E 4 HOH A 59 459 50 HOH HOH . E 4 HOH A 60 460 10 HOH HOH . E 4 HOH A 61 461 44 HOH HOH . E 4 HOH A 62 462 49 HOH HOH . E 4 HOH A 63 463 55 HOH HOH . E 4 HOH A 64 464 86 HOH HOH . E 4 HOH A 65 465 68 HOH HOH . E 4 HOH A 66 466 4 HOH HOH . E 4 HOH A 67 467 14 HOH HOH . E 4 HOH A 68 468 82 HOH HOH . E 4 HOH A 69 469 104 HOH HOH . E 4 HOH A 70 470 56 HOH HOH . E 4 HOH A 71 471 78 HOH HOH . E 4 HOH A 72 472 107 HOH HOH . E 4 HOH A 73 473 83 HOH HOH . E 4 HOH A 74 474 34 HOH HOH . E 4 HOH A 75 475 75 HOH HOH . E 4 HOH A 76 476 52 HOH HOH . E 4 HOH A 77 477 114 HOH HOH . E 4 HOH A 78 478 93 HOH HOH . E 4 HOH A 79 479 108 HOH HOH . E 4 HOH A 80 480 54 HOH HOH . E 4 HOH A 81 481 90 HOH HOH . E 4 HOH A 82 482 69 HOH HOH . E 4 HOH A 83 483 37 HOH HOH . E 4 HOH A 84 484 115 HOH HOH . E 4 HOH A 85 485 113 HOH HOH . E 4 HOH A 86 486 89 HOH HOH . E 4 HOH A 87 487 43 HOH HOH . E 4 HOH A 88 488 74 HOH HOH . E 4 HOH A 89 489 112 HOH HOH . E 4 HOH A 90 490 95 HOH HOH . E 4 HOH A 91 491 48 HOH HOH . E 4 HOH A 92 492 91 HOH HOH . E 4 HOH A 93 493 103 HOH HOH . E 4 HOH A 94 494 100 HOH HOH . E 4 HOH A 95 495 38 HOH HOH . E 4 HOH A 96 496 106 HOH HOH . E 4 HOH A 97 497 41 HOH HOH . E 4 HOH A 98 498 72 HOH HOH . E 4 HOH A 99 499 102 HOH HOH . E 4 HOH A 100 500 87 HOH HOH . E 4 HOH A 101 501 33 HOH HOH . E 4 HOH A 102 502 84 HOH HOH . E 4 HOH A 103 503 98 HOH HOH . E 4 HOH A 104 504 58 HOH HOH . E 4 HOH A 105 505 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLM . . . D 3 -9.05 -13.769 11.646 1 73.16 ? C1 CLM 303 A 1 HETATM 2 CL CL1 CLM . . . D 3 -8.631 -15.256 10.741 1 78.29 ? CL1 CLM 303 A 1 HETATM 3 CL CL2 CLM . . . D 3 -9.629 -12.453 10.573 1 78.51 ? CL2 CLM 303 A 1 HETATM 4 C C2 CLM . . . D 3 -10.048 -14.053 12.772 1 58.01 ? C2 CLM 303 A 1 HETATM 5 O O2 CLM . . . D 3 -10.775 -13.176 13.108 1 50.7 ? O2 CLM 303 A 1 HETATM 6 N N2 CLM . . . D 3 -10.065 -15.371 13.407 1 55.94 ? N2 CLM 303 A 1 HETATM 7 C C3 CLM . . . D 3 -10.905 -15.881 14.506 1 58.82 ? C3 CLM 303 A 1 HETATM 8 C C4 CLM . . . D 3 -11.355 -17.28 14.073 1 59.68 ? C4 CLM 303 A 1 HETATM 9 O O4 CLM . . . D 3 -10.245 -18.127 13.888 1 55.34 ? O4 CLM 303 A 1 HETATM 10 C C5 CLM . . . D 3 -12.121 -15.016 14.912 1 54.36 ? C5 CLM 303 A 1 HETATM 11 O O5 CLM . . . D 3 -11.749 -13.662 14.943 1 55 ? O5 CLM 303 A 1 HETATM 12 C C6 CLM . . . D 3 -12.691 -15.262 16.313 1 49.71 ? C6 CLM 303 A 1 HETATM 13 C C7 CLM . . . D 3 -13.348 -16.419 16.693 1 49.09 ? C7 CLM 303 A 1 HETATM 14 C C8 CLM . . . D 3 -13.846 -16.537 17.979 1 37.19 ? C8 CLM 303 A 1 HETATM 15 C C9 CLM . . . D 3 -13.712 -15.506 18.892 1 40.85 ? C9 CLM 303 A 1 HETATM 16 N N9 CLM . . . D 3 -14.227 -15.597 20.27 1 53.32 ? N9 CLM 303 A 1 HETATM 17 O O9A CLM . . . D 3 -14.388 -16.833 20.929 1 58.19 ? O9A CLM 303 A 1 HETATM 18 O O9B CLM . . . D 3 -14.51 -14.617 20.855 1 47.09 ? O9B CLM 303 A 1 HETATM 19 C C10 CLM . . . D 3 -13.077 -14.354 18.506 1 36.04 ? C10 CLM 303 A 1 HETATM 20 C C11 CLM . . . D 3 -12.579 -14.239 17.227 1 45.59 ? C11 CLM 303 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #