data_7WXI
#
_model_server_result.job_id            cOKCtXMCjGDgN0vQ2VFzqA 
_model_server_result.datetime_utc      '2024-12-26 09:52:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7wxi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":801}' 
#
_entry.id    7WXI 
#
_exptl.entry_id    7WXI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              227.109 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GAMMA-GLUTAMYL PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7WXI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7WXI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C5 H10 N O7 P' 
_chem_comp.formula_weight    227.109 
_chem_comp.id                RGP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'GAMMA-GLUTAMYL PHOSPHATE' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     5-OXO-5-(PHOSPHONOOXY)-D-NORVALINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA OA1 RGP doub 275 n n 
PA OA2 RGP sing 276 n n 
PA OA3 RGP sing 277 n n 
PA OE2 RGP sing 278 n n 
OA2 HA2 RGP sing 279 n n 
OA3 HA3 RGP sing 280 n n 
OE2 CD RGP sing 281 n n 
CD OE1 RGP doub 282 n n 
CD CG RGP sing 283 n n 
CG CB RGP sing 284 n n 
CG HG1 RGP sing 285 n n 
CG HG2 RGP sing 286 n n 
CB CA RGP sing 287 n n 
CB HB1 RGP sing 288 n n 
CB HB2 RGP sing 289 n n 
CA C RGP sing 290 n n 
CA N RGP sing 291 n n 
CA HA RGP sing 292 n n 
C OXT RGP doub 293 n n 
C O RGP sing 294 n n 
O HXT RGP sing 295 n n 
N H RGP sing 296 n n 
N H2 RGP sing 297 n n 
#
_atom_sites.entry_id                     7WXI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RGP A 1 801 801 RGP RGP . 
D 2 RGP B 1 801 801 RGP RGP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA RGP . . . D 2 155.99 181.411 225.379 1 145.22 ? PA RGP 801 B 1 
HETATM 2 O OA1 RGP . . . D 2 155.231 180.812 224.222 1 145.22 ? OA1 RGP 801 B 1 
HETATM 3 O OA2 RGP . . . D 2 156.379 182.828 225.037 1 145.22 ? OA2 RGP 801 B 1 
HETATM 4 O OA3 RGP . . . D 2 157.229 180.593 225.65 1 145.22 ? OA3 RGP 801 B 1 
HETATM 5 O OE2 RGP . . . D 2 155.03 181.407 226.716 1 145.22 ? OE2 RGP 801 B 1 
HETATM 6 C CD RGP . . . D 2 153.9 182.225 226.72 1 145.22 ? CD RGP 801 B 1 
HETATM 7 O OE1 RGP . . . D 2 152.836 181.765 226.487 1 145.22 ? OE1 RGP 801 B 1 
HETATM 8 C CG RGP . . . D 2 154.037 183.711 227.03 1 145.22 ? CG RGP 801 B 1 
HETATM 9 C CB RGP . . . D 2 154.792 183.883 228.343 1 145.22 ? CB RGP 801 B 1 
HETATM 10 C CA RGP . . . D 2 156.281 184.032 228.059 1 145.22 ? CA RGP 801 B 1 
HETATM 11 C C RGP . . . D 2 157.034 184.04 229.382 1 145.22 ? C RGP 801 B 1 
HETATM 12 O OXT RGP . . . D 2 157.933 184.895 229.58 1 145.22 ? OXT RGP 801 B 1 
HETATM 13 O O RGP . . . D 2 156.757 183.196 230.272 1 145.22 ? O RGP 801 B 1 
HETATM 14 N N RGP . . . D 2 156.515 185.284 227.365 1 145.22 ? N RGP 801 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#