data_7WZ3 # _model_server_result.job_id ppwWZb3F25XJ04_ou_ZxnA _model_server_result.datetime_utc '2024-10-20 12:58:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wz3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":601}' # _entry.id 7WZ3 # _exptl.entry_id 7WZ3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 427.201 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WZ3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WZ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 Q N N ? 9 R N N ? 9 S N N ? 9 T N N ? 9 U N N ? 9 V N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id P _struct_conn.ptnr1_label_atom_id N _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 91 _struct_conn.ptnr1_auth_asym_id z _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 91 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id V _struct_conn.ptnr2_label_atom_id O1B _struct_conn.ptnr2_label_comp_id ADP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id z _struct_conn.ptnr2_auth_comp_id ADP _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.298 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H15 N5 O10 P2' _chem_comp.formula_weight 427.201 _chem_comp.id ADP _chem_comp.mon_nstd_flag n _chem_comp.name "ADENOSINE-5'-DIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7WZ3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 9 ADP g 1 601 601 ADP ADP . R 9 ADP G 1 601 601 ADP ADP . S 9 ADP Q 1 601 601 ADP ADP . T 9 ADP q 1 601 601 ADP ADP . U 9 ADP Z 1 601 601 ADP ADP . V 9 ADP z 1 601 601 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB ADP . . . T 9 210.411 141.835 135.729 1 65.24 ? PB ADP 601 q 1 HETATM 2 O O1B ADP . . . T 9 209.429 141.518 134.628 1 65.24 ? O1B ADP 601 q 1 HETATM 3 O O2B ADP . . . T 9 210.327 140.912 136.922 1 65.24 ? O2B ADP 601 q 1 HETATM 4 O O3B ADP . . . T 9 210.504 143.3 136.08 1 65.24 ? O3B ADP 601 q 1 HETATM 5 P PA ADP . . . T 9 213.179 141.747 135.939 1 65.24 ? PA ADP 601 q 1 HETATM 6 O O1A ADP . . . T 9 214.099 140.569 135.722 1 65.24 ? O1A ADP 601 q 1 HETATM 7 O O2A ADP . . . T 9 212.72 142.087 137.334 1 65.24 ? O2A ADP 601 q 1 HETATM 8 O O3A ADP . . . T 9 211.844 141.493 135.08 1 65.24 ? O3A ADP 601 q 1 HETATM 9 O O5' ADP . . . T 9 213.867 143.045 135.273 1 65.24 ? O5' ADP 601 q 1 HETATM 10 C C5' ADP . . . T 9 213.101 144.11 134.713 1 65.24 ? C5' ADP 601 q 1 HETATM 11 C C4' ADP . . . T 9 213.983 145.115 133.967 1 65.24 ? C4' ADP 601 q 1 HETATM 12 O O4' ADP . . . T 9 214.703 145.95 134.882 1 65.24 ? O4' ADP 601 q 1 HETATM 13 C C3' ADP . . . T 9 215.015 144.494 133.031 1 65.24 ? C3' ADP 601 q 1 HETATM 14 O O3' ADP . . . T 9 214.573 144.58 131.673 1 65.24 ? O3' ADP 601 q 1 HETATM 15 C C2' ADP . . . T 9 216.283 145.3 133.246 1 65.24 ? C2' ADP 601 q 1 HETATM 16 O O2' ADP . . . T 9 216.701 145.944 132.041 1 65.24 ? O2' ADP 601 q 1 HETATM 17 C C1' ADP . . . T 9 215.957 146.335 134.311 1 65.24 ? C1' ADP 601 q 1 HETATM 18 N N9 ADP . . . T 9 217.029 146.339 135.334 1 65.24 ? N9 ADP 601 q 1 HETATM 19 C C8 ADP . . . T 9 216.917 145.818 136.566 1 65.24 ? C8 ADP 601 q 1 HETATM 20 N N7 ADP . . . T 9 218.074 145.971 137.262 1 65.24 ? N7 ADP 601 q 1 HETATM 21 C C5 ADP . . . T 9 218.95 146.609 136.469 1 65.24 ? C5 ADP 601 q 1 HETATM 22 C C6 ADP . . . T 9 220.345 147.095 136.584 1 65.24 ? C6 ADP 601 q 1 HETATM 23 N N6 ADP . . . T 9 221.076 146.923 137.714 1 65.24 ? N6 ADP 601 q 1 HETATM 24 N N1 ADP . . . T 9 220.875 147.719 135.511 1 65.24 ? N1 ADP 601 q 1 HETATM 25 C C2 ADP . . . T 9 220.184 147.908 134.372 1 65.24 ? C2 ADP 601 q 1 HETATM 26 N N3 ADP . . . T 9 218.915 147.494 134.207 1 65.24 ? N3 ADP 601 q 1 HETATM 27 C C4 ADP . . . T 9 218.253 146.855 135.198 1 65.24 ? C4 ADP 601 q 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 90 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 27 #