data_7WZ9 # _model_server_result.job_id 8fym1eCMK8g0zcHD-bFfew _model_server_result.datetime_utc '2024-10-20 18:46:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1007}' # _entry.id 7WZ9 # _exptl.entry_id 7WZ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 407.605 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 16-chloranyl-~{N},~{N}-dimethyl-15-thia-1$l^{4},12$l^{4},13-triaza-16$l^{4}-indatetracyclo[8.6.0.0^{2,7}.0^{12,16}]hexadeca-1,3,5,7,9,11,13-heptaen-14-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.4 _cell.angle_gamma 90 _cell.entry_id 7WZ9 _cell.length_a 187.9 _cell.length_b 38.53 _cell.length_c 95.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 51 A CYS 53 1_555 A SG CYS 60 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 73 A CYS 75 1_555 A SG CYS 89 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf3 A SG CYS 88 A CYS 90 1_555 A SG CYS 99 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 A SG CYS 122 A CYS 124 1_555 A SG CYS 167 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf5 A SG CYS 166 A CYS 168 1_555 A SG CYS 175 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 A SG CYS 198 A CYS 200 1_555 A SG CYS 244 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 A SG CYS 243 A CYS 245 1_555 A SG CYS 251 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? disulf ? disulf8 A SG CYS 263 A CYS 265 1_555 A SG CYS 277 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf9 A SG CYS 276 A CYS 278 1_555 A SG CYS 287 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf10 A SG CYS 314 A CYS 316 1_555 A SG CYS 359 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf11 A SG CYS 358 A CYS 360 1_555 A SG CYS 367 A CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf12 A SG CYS 390 A CYS 392 1_555 A SG CYS 436 A CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf13 A SG CYS 435 A CYS 437 1_555 A SG CYS 446 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf14 A SG CYS 459 A CYS 461 1_555 A SG CYS 475 A CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf15 A SG CYS 474 A CYS 476 1_555 A SG CYS 485 A CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf16 A SG CYS 512 A CYS 514 1_555 A SG CYS 557 A CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf17 A SG CYS 556 A CYS 558 1_555 A SG CYS 565 A CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc1 A NE2 HIS 144 A HIS 146 1_555 H IN1 7Q8 . A 7Q8 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? # _chem_comp.formula 'C13 H13 Cl In N4 S' _chem_comp.formula_weight 407.605 _chem_comp.id 7Q8 _chem_comp.mon_nstd_flag . _chem_comp.name 16-chloranyl-~{N},~{N}-dimethyl-15-thia-1$l^{4},12$l^{4},13-triaza-16$l^{4}-indatetracyclo[8.6.0.0^{2,7}.0^{12,16}]hexadeca-1,3,5,7,9,11,13-heptaen-14-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 7Q8 sing 1 n y C1 C7 7Q8 doub 2 n y C1 C5 7Q8 sing 3 n y C6 N1 7Q8 doub 4 n y C6 C2 7Q8 sing 5 n y C7 C8 7Q8 sing 6 n y C8 C9 7Q8 doub 7 n y C9 N1 7Q8 sing 8 n y C9 C10 7Q8 sing 9 n n C10 N2 7Q8 doub 10 n n N2 N3 7Q8 sing 11 n n N2 IN1 7Q8 sing 12 n n N3 C13 7Q8 doub 13 n n C13 S1 7Q8 sing 14 n n C13 N4 7Q8 sing 15 n n N4 C16 7Q8 sing 16 n n N4 C17 7Q8 sing 17 n n C2 C3 7Q8 doub 18 n y C3 C4 7Q8 sing 19 n y C4 C5 7Q8 doub 20 n y IN1 CL1 7Q8 sing 21 n n C7 H1 7Q8 sing 22 n n C8 H2 7Q8 sing 23 n n C10 H3 7Q8 sing 24 n n C16 H6 7Q8 sing 25 n n C16 H7 7Q8 sing 26 n n C16 H8 7Q8 sing 27 n n C17 H9 7Q8 sing 28 n n C17 H10 7Q8 sing 29 n n C17 H11 7Q8 sing 30 n n C2 H12 7Q8 sing 31 n n C3 H13 7Q8 sing 32 n n C4 H14 7Q8 sing 33 n n C5 H15 7Q8 sing 34 n n S1 IN1 7Q8 sing 35 n n N1 IN1 7Q8 sing 36 n n # _atom_sites.entry_id 7WZ9 _atom_sites.fract_transf_matrix[1][1] 0.005322 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001466 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025954 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010847 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 1001 1001 PLM PLM . C 2 PLM A 1 1002 1002 PLM PLM . D 2 PLM A 1 1003 1003 PLM PLM . E 2 PLM A 1 1004 1004 PLM PLM . F 2 PLM A 1 1005 1005 PLM PLM . G 2 PLM A 1 1006 1006 PLM PLM . H 3 7Q8 A 1 1007 1 7Q8 1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7Q8 . . . H 3 32.559 2.075 28.587 1 114.84 ? C1 7Q8 1007 A 1 HETATM 2 C C6 7Q8 . . . H 3 32.306 0.702 28.581 1 121.63 ? C6 7Q8 1007 A 1 HETATM 3 C C7 7Q8 . . . H 3 32.277 2.836 29.729 1 122.21 ? C7 7Q8 1007 A 1 HETATM 4 C C8 7Q8 . . . H 3 31.825 2.245 30.886 1 124.27 ? C8 7Q8 1007 A 1 HETATM 5 C C9 7Q8 . . . H 3 31.579 0.885 30.887 1 129.64 ? C9 7Q8 1007 A 1 HETATM 6 N N1 7Q8 . . . H 3 31.8 0.088 29.757 1 136.5 ? N1 7Q8 1007 A 1 HETATM 7 C C10 7Q8 . . . H 3 31.081 0.198 32.083 1 145.54 ? C10 7Q8 1007 A 1 HETATM 8 N N2 7Q8 . . . H 3 30.996 -1.067 32.028 1 156.08 ? N2 7Q8 1007 A 1 HETATM 9 N N3 7Q8 . . . H 3 30.792 -1.87 33.181 1 161.59 ? N3 7Q8 1007 A 1 HETATM 10 C C13 7Q8 . . . H 3 31.282 -3.055 33.174 1 167.45 ? C13 7Q8 1007 A 1 HETATM 11 S S1 7Q8 . . . H 3 32.458 -3.278 32.114 1 131.54 ? S1 7Q8 1007 A 1 HETATM 12 N N4 7Q8 . . . H 3 30.738 -3.991 34.007 1 165.22 ? N4 7Q8 1007 A 1 HETATM 13 C C16 7Q8 . . . H 3 30.507 -5.409 33.667 1 155.55 ? C16 7Q8 1007 A 1 HETATM 14 C C17 7Q8 . . . H 3 30.3 -3.604 35.359 1 150.21 ? C17 7Q8 1007 A 1 HETATM 15 IN IN1 7Q8 . . . H 3 31.251 -2.269 30.041 1 170.11 ? IN1 7Q8 1007 A 1 HETATM 16 C C2 7Q8 . . . H 3 32.536 -0.016 27.409 1 125.33 ? C2 7Q8 1007 A 1 HETATM 17 C C3 7Q8 . . . H 3 33.016 0.616 26.265 1 120.87 ? C3 7Q8 1007 A 1 HETATM 18 C C4 7Q8 . . . H 3 33.269 1.988 26.286 1 121.64 ? C4 7Q8 1007 A 1 HETATM 19 C C5 7Q8 . . . H 3 33.028 2.711 27.451 1 121.48 ? C5 7Q8 1007 A 1 HETATM 20 CL CL1 7Q8 . . . H 3 30.619 -4.988 30.525 1 143.74 ? CL1 7Q8 1007 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 20 #