data_7WZC # _model_server_result.job_id UkSXUO7trbHYF5cdGq2yBA _model_server_result.datetime_utc '2024-10-11 06:18:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7wzc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7WZC # _exptl.entry_id 7WZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7WZC _cell.length_a 31.487 _cell.length_b 66.358 _cell.length_c 83.363 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7WZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 23 A THR 19 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 A O THR 41 A THR 37 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 C O1B GDP . A GDP 202 1_555 D MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc4 D MG MG . A MG 203 1_555 E O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc5 D MG MG . A MG 203 1_555 E O HOH . A HOH 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc6 D MG MG . A MG 203 1_555 E O HOH . A HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 174 n n C1 C2 GOL sing 175 n n C1 H11 GOL sing 176 n n C1 H12 GOL sing 177 n n O1 HO1 GOL sing 178 n n C2 O2 GOL sing 179 n n C2 C3 GOL sing 180 n n C2 H2 GOL sing 181 n n O2 HO2 GOL sing 182 n n C3 O3 GOL sing 183 n n C3 H31 GOL sing 184 n n C3 H32 GOL sing 185 n n O3 HO3 GOL sing 186 n n # _atom_sites.entry_id 7WZC _atom_sites.fract_transf_matrix[1][1] 0.031759 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 2 GOL GOL . C 3 GDP A 1 202 1 GDP GDP . D 4 MG A 1 203 1 MG MG . E 5 HOH A 1 301 76 HOH HOH . E 5 HOH A 2 302 62 HOH HOH . E 5 HOH A 3 303 67 HOH HOH . E 5 HOH A 4 304 22 HOH HOH . E 5 HOH A 5 305 32 HOH HOH . E 5 HOH A 6 306 85 HOH HOH . E 5 HOH A 7 307 54 HOH HOH . E 5 HOH A 8 308 74 HOH HOH . E 5 HOH A 9 309 105 HOH HOH . E 5 HOH A 10 310 40 HOH HOH . E 5 HOH A 11 311 36 HOH HOH . E 5 HOH A 12 312 55 HOH HOH . E 5 HOH A 13 313 99 HOH HOH . E 5 HOH A 14 314 107 HOH HOH . E 5 HOH A 15 315 53 HOH HOH . E 5 HOH A 16 316 13 HOH HOH . E 5 HOH A 17 317 102 HOH HOH . E 5 HOH A 18 318 14 HOH HOH . E 5 HOH A 19 319 21 HOH HOH . E 5 HOH A 20 320 44 HOH HOH . E 5 HOH A 21 321 1 HOH HOH . E 5 HOH A 22 322 25 HOH HOH . E 5 HOH A 23 323 33 HOH HOH . E 5 HOH A 24 324 51 HOH HOH . E 5 HOH A 25 325 52 HOH HOH . E 5 HOH A 26 326 19 HOH HOH . E 5 HOH A 27 327 31 HOH HOH . E 5 HOH A 28 328 48 HOH HOH . E 5 HOH A 29 329 10 HOH HOH . E 5 HOH A 30 330 24 HOH HOH . E 5 HOH A 31 331 63 HOH HOH . E 5 HOH A 32 332 97 HOH HOH . E 5 HOH A 33 333 77 HOH HOH . E 5 HOH A 34 334 72 HOH HOH . E 5 HOH A 35 335 56 HOH HOH . E 5 HOH A 36 336 58 HOH HOH . E 5 HOH A 37 337 5 HOH HOH . E 5 HOH A 38 338 4 HOH HOH . E 5 HOH A 39 339 6 HOH HOH . E 5 HOH A 40 340 45 HOH HOH . E 5 HOH A 41 341 80 HOH HOH . E 5 HOH A 42 342 3 HOH HOH . E 5 HOH A 43 343 7 HOH HOH . E 5 HOH A 44 344 20 HOH HOH . E 5 HOH A 45 345 43 HOH HOH . E 5 HOH A 46 346 57 HOH HOH . E 5 HOH A 47 347 118 HOH HOH . E 5 HOH A 48 348 11 HOH HOH . E 5 HOH A 49 349 27 HOH HOH . E 5 HOH A 50 350 26 HOH HOH . E 5 HOH A 51 351 94 HOH HOH . E 5 HOH A 52 352 59 HOH HOH . E 5 HOH A 53 353 83 HOH HOH . E 5 HOH A 54 354 34 HOH HOH . E 5 HOH A 55 355 96 HOH HOH . E 5 HOH A 56 356 39 HOH HOH . E 5 HOH A 57 357 17 HOH HOH . E 5 HOH A 58 358 100 HOH HOH . E 5 HOH A 59 359 65 HOH HOH . E 5 HOH A 60 360 88 HOH HOH . E 5 HOH A 61 361 42 HOH HOH . E 5 HOH A 62 362 112 HOH HOH . E 5 HOH A 63 363 15 HOH HOH . E 5 HOH A 64 364 46 HOH HOH . E 5 HOH A 65 365 37 HOH HOH . E 5 HOH A 66 366 47 HOH HOH . E 5 HOH A 67 367 90 HOH HOH . E 5 HOH A 68 368 2 HOH HOH . E 5 HOH A 69 369 61 HOH HOH . E 5 HOH A 70 370 16 HOH HOH . E 5 HOH A 71 371 18 HOH HOH . E 5 HOH A 72 372 41 HOH HOH . E 5 HOH A 73 373 8 HOH HOH . E 5 HOH A 74 374 50 HOH HOH . E 5 HOH A 75 375 71 HOH HOH . E 5 HOH A 76 376 9 HOH HOH . E 5 HOH A 77 377 28 HOH HOH . E 5 HOH A 78 378 79 HOH HOH . E 5 HOH A 79 379 110 HOH HOH . E 5 HOH A 80 380 35 HOH HOH . E 5 HOH A 81 381 70 HOH HOH . E 5 HOH A 82 382 60 HOH HOH . E 5 HOH A 83 383 23 HOH HOH . E 5 HOH A 84 384 66 HOH HOH . E 5 HOH A 85 385 108 HOH HOH . E 5 HOH A 86 386 73 HOH HOH . E 5 HOH A 87 387 84 HOH HOH . E 5 HOH A 88 388 30 HOH HOH . E 5 HOH A 89 389 103 HOH HOH . E 5 HOH A 90 390 49 HOH HOH . E 5 HOH A 91 391 91 HOH HOH . E 5 HOH A 92 392 12 HOH HOH . E 5 HOH A 93 393 68 HOH HOH . E 5 HOH A 94 394 81 HOH HOH . E 5 HOH A 95 395 29 HOH HOH . E 5 HOH A 96 396 69 HOH HOH . E 5 HOH A 97 397 82 HOH HOH . E 5 HOH A 98 398 106 HOH HOH . E 5 HOH A 99 399 86 HOH HOH . E 5 HOH A 100 400 98 HOH HOH . E 5 HOH A 101 401 119 HOH HOH . E 5 HOH A 102 402 104 HOH HOH . E 5 HOH A 103 403 78 HOH HOH . E 5 HOH A 104 404 64 HOH HOH . E 5 HOH A 105 405 95 HOH HOH . E 5 HOH A 106 406 109 HOH HOH . E 5 HOH A 107 407 111 HOH HOH . E 5 HOH A 108 408 114 HOH HOH . E 5 HOH A 109 409 87 HOH HOH . E 5 HOH A 110 410 38 HOH HOH . E 5 HOH A 111 411 101 HOH HOH . E 5 HOH A 112 412 115 HOH HOH . E 5 HOH A 113 413 113 HOH HOH . E 5 HOH A 114 414 92 HOH HOH . E 5 HOH A 115 415 116 HOH HOH . E 5 HOH A 116 416 117 HOH HOH . E 5 HOH A 117 417 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -19.087 3.363 -0.489 1 32.99 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . B 2 -20.172 4.265 -0.47 1 31.43 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . B 2 -17.824 4.029 0.068 1 27.46 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . B 2 -17.523 5.18 -0.674 1 34.28 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . B 2 -18.004 4.456 1.525 1 28.78 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . B 2 -17.111 3.711 2.317 1 31.82 ? O3 GOL 201 A 1 HETATM 7 H H11 GOL . . . B 2 -19.332 2.485 0.109 1 39.59 ? H11 GOL 201 A 1 HETATM 8 H H12 GOL . . . B 2 -18.905 3.034 -1.512 1 39.59 ? H12 GOL 201 A 1 HETATM 9 H HO1 GOL . . . B 2 -20.953 3.847 -0.889 1 37.72 ? HO1 GOL 201 A 1 HETATM 10 H H2 GOL . . . B 2 -16.998 3.321 0.009 1 32.95 ? H2 GOL 201 A 1 HETATM 11 H HO2 GOL . . . B 2 -18.253 5.828 -0.584 1 41.14 ? HO2 GOL 201 A 1 HETATM 12 H H31 GOL . . . B 2 -19.03 4.27 1.845 1 34.53 ? H31 GOL 201 A 1 HETATM 13 H H32 GOL . . . B 2 -17.797 5.521 1.631 1 34.53 ? H32 GOL 201 A 1 HETATM 14 H HO3 GOL . . . B 2 -16.231 3.692 1.887 1 38.19 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #