data_7X0T # _model_server_result.job_id CFFmAksiLfjSDYNxGGtN-A _model_server_result.datetime_utc '2025-09-01 01:04:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x0t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 7X0T # _exptl.entry_id 7X0T _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 893.73 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OCTANOYL-COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7X0T _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X0T _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H50 N7 O17 P3 S' _chem_comp.formula_weight 893.73 _chem_comp.id CO8 _chem_comp.mon_nstd_flag . _chem_comp.name 'OCTANOYL-COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A CO8 sing 119 n y N1A C6A CO8 doub 120 n y C2A N3A CO8 doub 121 n y C2A H2A CO8 sing 122 n n N3A C4A CO8 sing 123 n y C4A C5A CO8 doub 124 n y C4A N9A CO8 sing 125 n y C5A C6A CO8 sing 126 n y C5A N7A CO8 sing 127 n y C6A N6A CO8 sing 128 n n N6A H61A CO8 sing 129 n n N6A H62A CO8 sing 130 n n N7A C8A CO8 doub 131 n y C8A N9A CO8 sing 132 n y C8A H8A CO8 sing 133 n n N9A C1B CO8 sing 134 n n C1B C2B CO8 sing 135 n n C1B O4B CO8 sing 136 n n C1B H1B CO8 sing 137 n n C2B O2B CO8 sing 138 n n C2B C3B CO8 sing 139 n n C2B H2B CO8 sing 140 n n O2B HO2A CO8 sing 141 n n C3B O3B CO8 sing 142 n n C3B C4B CO8 sing 143 n n C3B H3B CO8 sing 144 n n O3B P3B CO8 sing 145 n n P3B O7A CO8 doub 146 n n P3B O8A CO8 sing 147 n n P3B O9A CO8 sing 148 n n O8A HOA8 CO8 sing 149 n n O9A HOA9 CO8 sing 150 n n C4B O4B CO8 sing 151 n n C4B C5B CO8 sing 152 n n C4B H4B CO8 sing 153 n n C5B O5B CO8 sing 154 n n C5B H51A CO8 sing 155 n n C5B H52A CO8 sing 156 n n O5B P1A CO8 sing 157 n n P1A O1A CO8 doub 158 n n P1A O2A CO8 sing 159 n n P1A O3A CO8 sing 160 n n O2A HOA2 CO8 sing 161 n n O3A P2A CO8 sing 162 n n P2A O4A CO8 doub 163 n n P2A O5A CO8 sing 164 n n P2A O6A CO8 sing 165 n n O5A HOA5 CO8 sing 166 n n O6A CCP CO8 sing 167 n n CBP CCP CO8 sing 168 n n CBP CDP CO8 sing 169 n n CBP CEP CO8 sing 170 n n CBP CAP CO8 sing 171 n n CCP H121 CO8 sing 172 n n CCP H122 CO8 sing 173 n n CDP H131 CO8 sing 174 n n CDP H132 CO8 sing 175 n n CDP H133 CO8 sing 176 n n CEP H141 CO8 sing 177 n n CEP H142 CO8 sing 178 n n CEP H143 CO8 sing 179 n n CAP OAP CO8 sing 180 n n CAP C9P CO8 sing 181 n n CAP H10 CO8 sing 182 n n OAP HO1 CO8 sing 183 n n C9P O9P CO8 doub 184 n n C9P N8P CO8 sing 185 n n N8P C7P CO8 sing 186 n n N8P HN8 CO8 sing 187 n n C7P C6P CO8 sing 188 n n C7P H71 CO8 sing 189 n n C7P H72 CO8 sing 190 n n C6P C5P CO8 sing 191 n n C6P H61 CO8 sing 192 n n C6P H62 CO8 sing 193 n n C5P O5P CO8 doub 194 n n C5P N4P CO8 sing 195 n n N4P C3P CO8 sing 196 n n N4P HN4 CO8 sing 197 n n C3P C2P CO8 sing 198 n n C3P H31 CO8 sing 199 n n C3P H32 CO8 sing 200 n n C2P S1P CO8 sing 201 n n C2P H21 CO8 sing 202 n n C2P H22 CO8 sing 203 n n S1P C1' CO8 sing 204 n n C1' O1' CO8 doub 205 n n C1' C2' CO8 sing 206 n n C2' C3' CO8 sing 207 n n C2' "H2'1" CO8 sing 208 n n C2' "H2'2" CO8 sing 209 n n C3' C4' CO8 sing 210 n n C3' "H3'1" CO8 sing 211 n n C3' "H3'2" CO8 sing 212 n n C4' C5' CO8 sing 213 n n C4' "H4'1" CO8 sing 214 n n C4' "H4'2" CO8 sing 215 n n C5' C6' CO8 sing 216 n n C5' "H5'1" CO8 sing 217 n n C5' "H5'2" CO8 sing 218 n n C6' C7' CO8 sing 219 n n C6' "H6'1" CO8 sing 220 n n C6' "H6'2" CO8 sing 221 n n C7' C8' CO8 sing 222 n n C7' "H7'1" CO8 sing 223 n n C7' "H7'2" CO8 sing 224 n n C8' "H8'1" CO8 sing 225 n n C8' "H8'2" CO8 sing 226 n n C8' "H8'3" CO8 sing 227 n n # _atom_sites.entry_id 7X0T _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO8 A 1 801 5 CO8 LIG . D 3 ATP B 1 801 801 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A CO8 . . . C 2 166.493 156.435 172.729 1 36.41 ? N1A CO8 801 A 1 HETATM 2 C C2A CO8 . . . C 2 167.128 157.437 173.323 1 36.41 ? C2A CO8 801 A 1 HETATM 3 N N3A CO8 . . . C 2 166.605 158.05 174.367 1 36.41 ? N3A CO8 801 A 1 HETATM 4 C C4A CO8 . . . C 2 165.407 157.683 174.873 1 36.41 ? C4A CO8 801 A 1 HETATM 5 C C5A CO8 . . . C 2 164.724 156.643 174.272 1 36.41 ? C5A CO8 801 A 1 HETATM 6 C C6A CO8 . . . C 2 165.305 156.01 173.157 1 36.41 ? C6A CO8 801 A 1 HETATM 7 N N6A CO8 . . . C 2 164.638 154.914 172.496 1 36.41 ? N6A CO8 801 A 1 HETATM 8 N N7A CO8 . . . C 2 163.588 156.484 174.949 1 36.41 ? N7A CO8 801 A 1 HETATM 9 C C8A CO8 . . . C 2 163.552 157.376 175.921 1 36.41 ? C8A CO8 801 A 1 HETATM 10 N N9A CO8 . . . C 2 164.654 158.104 175.891 1 36.41 ? N9A CO8 801 A 1 HETATM 11 C C1B CO8 . . . C 2 164.989 159.214 176.79 1 36.41 ? C1B CO8 801 A 1 HETATM 12 C C2B CO8 . . . C 2 164.644 158.936 178.255 1 36.41 ? C2B CO8 801 A 1 HETATM 13 O O2B CO8 . . . C 2 163.453 159.516 178.543 1 36.41 ? O2B CO8 801 A 1 HETATM 14 C C3B CO8 . . . C 2 165.814 159.586 179.049 1 36.41 ? C3B CO8 801 A 1 HETATM 15 O O3B CO8 . . . C 2 165.296 160.539 180.077 1 36.41 ? O3B CO8 801 A 1 HETATM 16 P P3B CO8 . . . C 2 164.531 159.991 181.428 1 36.41 ? P3B CO8 801 A 1 HETATM 17 O O7A CO8 . . . C 2 165.105 160.646 182.653 1 36.41 ? O7A CO8 801 A 1 HETATM 18 O O8A CO8 . . . C 2 163.055 160.276 181.303 1 36.41 ? O8A CO8 801 A 1 HETATM 19 O O9A CO8 . . . C 2 164.726 158.509 181.539 1 36.41 ? O9A CO8 801 A 1 HETATM 20 C C4B CO8 . . . C 2 166.516 160.238 178.16 1 36.41 ? C4B CO8 801 A 1 HETATM 21 O O4B CO8 . . . C 2 166.279 159.432 176.795 1 36.41 ? O4B CO8 801 A 1 HETATM 22 C C5B CO8 . . . C 2 167.995 160.25 178.455 1 36.41 ? C5B CO8 801 A 1 HETATM 23 O O5B CO8 . . . C 2 168.604 161.04 177.483 1 36.41 ? O5B CO8 801 A 1 HETATM 24 P P1A CO8 . . . C 2 170.247 161.133 177.388 1 36.41 ? P1A CO8 801 A 1 HETATM 25 O O1A CO8 . . . C 2 170.896 160.243 178.43 1 36.41 ? O1A CO8 801 A 1 HETATM 26 O O2A CO8 . . . C 2 170.664 160.674 176.014 1 36.41 ? O2A CO8 801 A 1 HETATM 27 O O3A CO8 . . . C 2 170.748 162.685 177.601 1 36.41 ? O3A CO8 801 A 1 HETATM 28 P P2A CO8 . . . C 2 171.724 163.453 176.531 1 36.41 ? P2A CO8 801 A 1 HETATM 29 O O4A CO8 . . . C 2 171.012 163.5 175.207 1 36.41 ? O4A CO8 801 A 1 HETATM 30 O O5A CO8 . . . C 2 173.014 162.675 176.376 1 36.41 ? O5A CO8 801 A 1 HETATM 31 O O6A CO8 . . . C 2 172.042 164.998 176.99 1 36.41 ? O6A CO8 801 A 1 HETATM 32 C CBP CO8 . . . C 2 173.914 165.738 178.284 1 36.41 ? CBP CO8 801 A 1 HETATM 33 C CCP CO8 . . . C 2 173.343 165.495 176.891 1 36.41 ? CCP CO8 801 A 1 HETATM 34 C CDP CO8 . . . C 2 174.307 164.422 178.96 1 36.41 ? CDP CO8 801 A 1 HETATM 35 C CEP CO8 . . . C 2 172.802 166.391 179.091 1 36.41 ? CEP CO8 801 A 1 HETATM 36 C CAP CO8 . . . C 2 175.071 166.733 178.278 1 36.41 ? CAP CO8 801 A 1 HETATM 37 O OAP CO8 . . . C 2 175.332 167.084 179.613 1 36.41 ? OAP CO8 801 A 1 HETATM 38 C C9P CO8 . . . C 2 176.393 166.256 177.626 1 36.41 ? C9P CO8 801 A 1 HETATM 39 O O9P CO8 . . . C 2 176.47 165.234 177.029 1 36.41 ? O9P CO8 801 A 1 HETATM 40 N N8P CO8 . . . C 2 177.621 167.022 177.694 1 36.41 ? N8P CO8 801 A 1 HETATM 41 C C7P CO8 . . . C 2 177.793 168.296 178.353 1 36.41 ? C7P CO8 801 A 1 HETATM 42 C C6P CO8 . . . C 2 179.28 168.582 178.609 1 36.41 ? C6P CO8 801 A 1 HETATM 43 C C5P CO8 . . . C 2 179.643 169.511 179.78 1 36.41 ? C5P CO8 801 A 1 HETATM 44 O O5P CO8 . . . C 2 179.89 169.009 180.83 1 36.41 ? O5P CO8 801 A 1 HETATM 45 N N4P CO8 . . . C 2 179.703 170.978 179.669 1 36.41 ? N4P CO8 801 A 1 HETATM 46 C C3P CO8 . . . C 2 179.403 171.654 178.415 1 36.41 ? C3P CO8 801 A 1 HETATM 47 C C2P CO8 . . . C 2 179.244 173.166 178.646 1 36.41 ? C2P CO8 801 A 1 HETATM 48 S S1P CO8 . . . C 2 177.502 173.683 178.427 1 36.41 ? S1P CO8 801 A 1 HETATM 49 C C1' CO8 . . . C 2 177.054 173.645 176.665 1 36.41 ? C1' CO8 801 A 1 HETATM 50 O O1' CO8 . . . C 2 176.876 174.669 176.09 1 36.41 ? O1' CO8 801 A 1 HETATM 51 C C2' CO8 . . . C 2 176.9 172.289 175.938 1 36.41 ? C2' CO8 801 A 1 HETATM 52 C C3' CO8 . . . C 2 176.156 172.387 174.593 1 36.41 ? C3' CO8 801 A 1 HETATM 53 C C4' CO8 . . . C 2 176.776 171.437 173.555 1 36.41 ? C4' CO8 801 A 1 HETATM 54 C C5' CO8 . . . C 2 175.985 170.122 173.376 1 36.41 ? C5' CO8 801 A 1 HETATM 55 C C6' CO8 . . . C 2 176.783 168.876 173.785 1 36.41 ? C6' CO8 801 A 1 HETATM 56 C C7' CO8 . . . C 2 176.292 167.603 173.069 1 36.41 ? C7' CO8 801 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 430 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 56 #