data_7X15 # _model_server_result.job_id CWulRXbp-isXyui8HiecNg _model_server_result.datetime_utc '2024-10-18 15:23:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 7X15 # _exptl.entry_id 7X15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 691.959 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7X15 _cell.length_a 100.126 _cell.length_b 100.126 _cell.length_c 163.941 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 61 A ARG 367 1_555 A N MSE 62 A MSE 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 62 A MSE 368 1_555 A N PHE 63 A PHE 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C PHE 64 A PHE 370 1_555 A N MSE 65 A MSE 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C MSE 65 A MSE 371 1_555 A N GLU 66 A GLU 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C GLN 70 A GLN 376 1_555 A N MSE 71 A MSE 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 71 A MSE 377 1_555 A N ILE 72 A ILE 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C ASP 92 A ASP 398 1_555 A N MSE 93 A MSE 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C MSE 93 A MSE 399 1_555 A N LEU 94 A LEU 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 A C LYS 107 A LYS 413 1_555 A N MSE 108 A MSE 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 A C MSE 108 A MSE 414 1_555 A N GLU 109 A GLU 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C CYS 117 A CYS 423 1_555 A N MSE 118 A MSE 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 118 A MSE 424 1_555 A N ASN 119 A ASN 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 A C LEU 129 A LEU 435 1_555 A N MSE 130 A MSE 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 A C MSE 130 A MSE 436 1_555 A N ASP 131 A ASP 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 A C LEU 176 A LEU 482 1_555 A N MSE 177 A MSE 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 A C MSE 177 A MSE 483 1_555 A N VAL 178 A VAL 484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 A C ASP 225 A ASP 531 1_555 A N MSE 226 A MSE 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale18 A C MSE 226 A MSE 532 1_555 A N PHE 227 A PHE 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale19 A C LEU 255 A LEU 561 1_555 A N MSE 256 A MSE 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale20 A C MSE 256 A MSE 562 1_555 A N GLY 257 A GLY 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C37 H74 N O8 P' _chem_comp.formula_weight 691.959 _chem_comp.id PEF _chem_comp.mon_nstd_flag . _chem_comp.name DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-[AMINOETHYLPHOSPHORYL]-[1,2-DI-PALMITOYL]-SN-GLYCEROL # _atom_sites.entry_id 7X15 _atom_sites.fract_transf_matrix[1][1] 0.009987 _atom_sites.fract_transf_matrix[1][2] 0.005766 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0061 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 601 1 FMT FMT . C 3 PEF A 1 602 1 PEF PEF . D 4 HOH A 1 701 2 HOH HOH . D 4 HOH A 2 702 4 HOH HOH . D 4 HOH A 3 703 8 HOH HOH . D 4 HOH A 4 704 9 HOH HOH . D 4 HOH A 5 705 1 HOH HOH . D 4 HOH A 6 706 10 HOH HOH . D 4 HOH A 7 707 6 HOH HOH . D 4 HOH A 8 708 3 HOH HOH . D 4 HOH A 9 709 7 HOH HOH . D 4 HOH A 10 710 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PEF . . . C 3 31.303 44.491 84.517 1 87.59 ? C2 PEF 602 A 1 HETATM 2 C C1 PEF . . . C 3 32.015 43.168 84.365 1 93.34 ? C1 PEF 602 A 1 HETATM 3 N N PEF . . . C 3 26.848 43.841 86.412 1 76.09 ? N PEF 602 A 1 HETATM 4 C C3 PEF . . . C 3 31.494 45.014 85.943 1 80.84 ? C3 PEF 602 A 1 HETATM 5 C C4 PEF . . . C 3 28.906 42.553 86.476 1 98.71 ? C4 PEF 602 A 1 HETATM 6 C C5 PEF . . . C 3 27.499 42.717 87.053 1 81.02 ? C5 PEF 602 A 1 HETATM 7 C C10 PEF . . . C 3 31.365 46.761 83.786 1 78.24 ? C10 PEF 602 A 1 HETATM 8 C C11 PEF . . . C 3 29.902 47.151 83.446 1 55.83 ? C11 PEF 602 A 1 HETATM 9 C C12 PEF . . . C 3 29.452 48.373 84.297 1 49.79 ? C12 PEF 602 A 1 HETATM 10 C C13 PEF . . . C 3 29.525 49.662 83.413 1 51.98 ? C13 PEF 602 A 1 HETATM 11 C C14 PEF . . . C 3 28.977 50.867 84.191 1 31.89 ? C14 PEF 602 A 1 HETATM 12 C C15 PEF . . . C 3 29.443 52.176 83.487 1 26.82 ? C15 PEF 602 A 1 HETATM 13 C C16 PEF . . . C 3 29.217 53.374 84.4 1 28.15 ? C16 PEF 602 A 1 HETATM 14 C C17 PEF . . . C 3 29.805 54.612 83.74 1 33.73 ? C17 PEF 602 A 1 HETATM 15 C C18 PEF . . . C 3 30.011 55.733 84.809 1 34.41 ? C18 PEF 602 A 1 HETATM 16 C C19 PEF . . . C 3 30.617 56.973 84.122 1 33.68 ? C19 PEF 602 A 1 HETATM 17 C C20 PEF . . . C 3 30.75 58.139 85.155 1 33.71 ? C20 PEF 602 A 1 HETATM 18 C C21 PEF . . . C 3 30.707 59.48 84.399 1 38.55 ? C21 PEF 602 A 1 HETATM 19 C C22 PEF . . . C 3 32.027 59.672 83.606 1 36.39 ? C22 PEF 602 A 1 HETATM 20 C C23 PEF . . . C 3 31.826 60.77 82.529 1 37.11 ? C23 PEF 602 A 1 HETATM 21 C C24 PEF . . . C 3 33.113 60.942 81.741 1 35.62 ? C24 PEF 602 A 1 HETATM 22 C C25 PEF . . . C 3 32.838 61.799 80.495 1 22.12 ? C25 PEF 602 A 1 HETATM 23 C C30 PEF . . . C 3 30.454 46.538 87.514 1 84.3 ? C30 PEF 602 A 1 HETATM 24 C C31 PEF . . . C 3 29.233 47.144 88.25 1 61.07 ? C31 PEF 602 A 1 HETATM 25 C C32 PEF . . . C 3 29.692 48.424 89.023 1 42.1 ? C32 PEF 602 A 1 HETATM 26 C C33 PEF . . . C 3 29.742 49.626 88.044 1 43.91 ? C33 PEF 602 A 1 HETATM 27 C C34 PEF . . . C 3 30.529 50.806 88.685 1 38.46 ? C34 PEF 602 A 1 HETATM 28 C C35 PEF . . . C 3 30.257 52.101 87.899 1 28.3 ? C35 PEF 602 A 1 HETATM 29 C C36 PEF . . . C 3 30.741 53.303 88.713 1 33.15 ? C36 PEF 602 A 1 HETATM 30 C C37 PEF . . . C 3 32.281 53.462 88.539 1 37.89 ? C37 PEF 602 A 1 HETATM 31 C C38 PEF . . . C 3 32.832 54.487 89.566 1 34.42 ? C38 PEF 602 A 1 HETATM 32 C C39 PEF . . . C 3 34.371 54.429 89.563 1 34.15 ? C39 PEF 602 A 1 HETATM 33 C C40 PEF . . . C 3 34.907 54.676 90.994 1 34.51 ? C40 PEF 602 A 1 HETATM 34 C C41 PEF . . . C 3 36.449 54.698 90.976 1 32.62 ? C41 PEF 602 A 1 HETATM 35 C C42 PEF . . . C 3 36.976 54.529 92.43 1 43.87 ? C42 PEF 602 A 1 HETATM 36 C C43 PEF . . . C 3 37.045 55.928 93.135 1 33.93 ? C43 PEF 602 A 1 HETATM 37 C C44 PEF . . . C 3 38.23 56.728 92.582 1 35.41 ? C44 PEF 602 A 1 HETATM 38 C C45 PEF . . . C 3 38.45 57.986 93.454 1 37.82 ? C45 PEF 602 A 1 HETATM 39 O O4 PEF . . . C 3 32.133 47.597 84.214 1 79.58 ? O4 PEF 602 A 1 HETATM 40 O O5 PEF . . . C 3 31.573 46.837 87.872 1 101.89 ? O5 PEF 602 A 1 HETATM 41 O O2 PEF . . . C 3 31.814 45.416 83.585 1 83.55 ? O2 PEF 602 A 1 HETATM 42 O O3 PEF . . . C 3 30.272 45.617 86.402 1 86.82 ? O3 PEF 602 A 1 HETATM 43 O O1P PEF . . . C 3 30.518 39.879 84.72 1 122.74 ? O1P PEF 602 A 1 HETATM 44 O O2P PEF . . . C 3 29.997 41.688 83.131 1 91.83 1 O2P PEF 602 A 1 HETATM 45 O O3P PEF . . . C 3 31.389 42.206 85.187 1 115.58 ? O3P PEF 602 A 1 HETATM 46 O O4P PEF . . . C 3 28.858 41.661 85.386 1 103.64 ? O4P PEF 602 A 1 HETATM 47 P P PEF . . . C 3 30.192 41.35 84.589 1 134.65 ? P PEF 602 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 47 #