data_7X1X # _model_server_result.job_id 94udtkYP13WxsY9uydk2zg _model_server_result.datetime_utc '2024-11-15 08:01:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x1x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 7X1X # _exptl.entry_id 7X1X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7X1X _cell.length_a 54.07 _cell.length_b 92.07 _cell.length_c 163.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X1X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 250 n n PA O2A NAD sing 251 n n PA O5B NAD sing 252 n n PA O3 NAD sing 253 n n O2A HOA2 NAD sing 254 n n O5B C5B NAD sing 255 n n C5B C4B NAD sing 256 n n C5B H51A NAD sing 257 n n C5B H52A NAD sing 258 n n C4B O4B NAD sing 259 n n C4B C3B NAD sing 260 n n C4B H4B NAD sing 261 n n O4B C1B NAD sing 262 n n C3B O3B NAD sing 263 n n C3B C2B NAD sing 264 n n C3B H3B NAD sing 265 n n O3B HO3A NAD sing 266 n n C2B O2B NAD sing 267 n n C2B C1B NAD sing 268 n n C2B H2B NAD sing 269 n n O2B HO2A NAD sing 270 n n C1B N9A NAD sing 271 n n C1B H1B NAD sing 272 n n N9A C8A NAD sing 273 n y N9A C4A NAD sing 274 n y C8A N7A NAD doub 275 n y C8A H8A NAD sing 276 n n N7A C5A NAD sing 277 n y C5A C6A NAD sing 278 n y C5A C4A NAD doub 279 n y C6A N6A NAD sing 280 n n C6A N1A NAD doub 281 n y N6A H61A NAD sing 282 n n N6A H62A NAD sing 283 n n N1A C2A NAD sing 284 n y C2A N3A NAD doub 285 n y C2A H2A NAD sing 286 n n N3A C4A NAD sing 287 n y O3 PN NAD sing 288 n n PN O1N NAD doub 289 n n PN O2N NAD sing 290 n n PN O5D NAD sing 291 n n O5D C5D NAD sing 292 n n C5D C4D NAD sing 293 n n C5D H51N NAD sing 294 n n C5D H52N NAD sing 295 n n C4D O4D NAD sing 296 n n C4D C3D NAD sing 297 n n C4D H4D NAD sing 298 n n O4D C1D NAD sing 299 n n C3D O3D NAD sing 300 n n C3D C2D NAD sing 301 n n C3D H3D NAD sing 302 n n O3D HO3N NAD sing 303 n n C2D O2D NAD sing 304 n n C2D C1D NAD sing 305 n n C2D H2D NAD sing 306 n n O2D HO2N NAD sing 307 n n C1D N1N NAD sing 308 n n C1D H1D NAD sing 309 n n N1N C2N NAD sing 310 n y N1N C6N NAD doub 311 n y C2N C3N NAD doub 312 n y C2N H2N NAD sing 313 n n C3N C7N NAD sing 314 n n C3N C4N NAD sing 315 n y C7N O7N NAD doub 316 n n C7N N7N NAD sing 317 n n N7N H71N NAD sing 318 n n N7N H72N NAD sing 319 n n C4N C5N NAD doub 320 n y C4N H4N NAD sing 321 n n C5N C6N NAD sing 322 n y C5N H5N NAD sing 323 n n C6N H6N NAD sing 324 n n # _atom_sites.entry_id 7X1X _atom_sites.fract_transf_matrix[1][1] 0.018495 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006126 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 501 501 GOL GOL . D 2 GOL A 1 502 503 GOL GOL . E 3 NAD A 1 503 504 NAD NAD . F 2 GOL B 1 501 501 GOL GOL . G 3 NAD B 1 502 502 NAD NAD . H 4 HOH A 1 601 164 HOH HOH . H 4 HOH A 2 602 64 HOH HOH . H 4 HOH A 3 603 59 HOH HOH . H 4 HOH A 4 604 163 HOH HOH . H 4 HOH A 5 605 144 HOH HOH . H 4 HOH A 6 606 60 HOH HOH . H 4 HOH A 7 607 56 HOH HOH . H 4 HOH A 8 608 148 HOH HOH . H 4 HOH A 9 609 55 HOH HOH . H 4 HOH A 10 610 149 HOH HOH . H 4 HOH A 11 611 34 HOH HOH . H 4 HOH A 12 612 37 HOH HOH . H 4 HOH A 13 613 65 HOH HOH . H 4 HOH A 14 614 121 HOH HOH . H 4 HOH A 15 615 41 HOH HOH . H 4 HOH A 16 616 98 HOH HOH . H 4 HOH A 17 617 118 HOH HOH . H 4 HOH A 18 618 57 HOH HOH . H 4 HOH A 19 619 35 HOH HOH . H 4 HOH A 20 620 138 HOH HOH . H 4 HOH A 21 621 104 HOH HOH . H 4 HOH A 22 622 127 HOH HOH . H 4 HOH A 23 623 43 HOH HOH . H 4 HOH A 24 624 91 HOH HOH . H 4 HOH A 25 625 33 HOH HOH . H 4 HOH A 26 626 77 HOH HOH . H 4 HOH A 27 627 90 HOH HOH . H 4 HOH A 28 628 45 HOH HOH . H 4 HOH A 29 629 125 HOH HOH . H 4 HOH A 30 630 4 HOH HOH . H 4 HOH A 31 631 165 HOH HOH . H 4 HOH A 32 632 20 HOH HOH . H 4 HOH A 33 633 167 HOH HOH . H 4 HOH A 34 634 18 HOH HOH . H 4 HOH A 35 635 32 HOH HOH . H 4 HOH A 36 636 143 HOH HOH . H 4 HOH A 37 637 169 HOH HOH . H 4 HOH A 38 638 6 HOH HOH . H 4 HOH A 39 639 52 HOH HOH . H 4 HOH A 40 640 42 HOH HOH . H 4 HOH A 41 641 166 HOH HOH . H 4 HOH A 42 642 1 HOH HOH . H 4 HOH A 43 643 105 HOH HOH . H 4 HOH A 44 644 101 HOH HOH . H 4 HOH A 45 645 156 HOH HOH . H 4 HOH A 46 646 24 HOH HOH . H 4 HOH A 47 647 124 HOH HOH . H 4 HOH A 48 648 39 HOH HOH . H 4 HOH A 49 649 66 HOH HOH . H 4 HOH A 50 650 44 HOH HOH . H 4 HOH A 51 651 133 HOH HOH . H 4 HOH A 52 652 78 HOH HOH . H 4 HOH A 53 653 79 HOH HOH . H 4 HOH A 54 654 74 HOH HOH . H 4 HOH A 55 655 5 HOH HOH . H 4 HOH A 56 656 97 HOH HOH . H 4 HOH A 57 657 111 HOH HOH . H 4 HOH A 58 658 38 HOH HOH . H 4 HOH A 59 659 103 HOH HOH . H 4 HOH A 60 660 25 HOH HOH . H 4 HOH A 61 661 100 HOH HOH . H 4 HOH A 62 662 109 HOH HOH . H 4 HOH A 63 663 129 HOH HOH . H 4 HOH A 64 664 155 HOH HOH . H 4 HOH A 65 665 28 HOH HOH . H 4 HOH A 66 666 112 HOH HOH . H 4 HOH A 67 667 130 HOH HOH . H 4 HOH A 68 668 87 HOH HOH . H 4 HOH A 69 669 108 HOH HOH . H 4 HOH A 70 670 157 HOH HOH . H 4 HOH A 71 671 36 HOH HOH . H 4 HOH A 72 672 17 HOH HOH . H 4 HOH A 73 673 117 HOH HOH . H 4 HOH A 74 674 168 HOH HOH . H 4 HOH A 75 675 126 HOH HOH . I 4 HOH B 1 601 145 HOH HOH . I 4 HOH B 2 602 84 HOH HOH . I 4 HOH B 3 603 30 HOH HOH . I 4 HOH B 4 604 62 HOH HOH . I 4 HOH B 5 605 22 HOH HOH . I 4 HOH B 6 606 128 HOH HOH . I 4 HOH B 7 607 161 HOH HOH . I 4 HOH B 8 608 51 HOH HOH . I 4 HOH B 9 609 162 HOH HOH . I 4 HOH B 10 610 70 HOH HOH . I 4 HOH B 11 611 54 HOH HOH . I 4 HOH B 12 612 58 HOH HOH . I 4 HOH B 13 613 151 HOH HOH . I 4 HOH B 14 614 147 HOH HOH . I 4 HOH B 15 615 153 HOH HOH . I 4 HOH B 16 616 102 HOH HOH . I 4 HOH B 17 617 158 HOH HOH . I 4 HOH B 18 618 15 HOH HOH . I 4 HOH B 19 619 150 HOH HOH . I 4 HOH B 20 620 110 HOH HOH . I 4 HOH B 21 621 88 HOH HOH . I 4 HOH B 22 622 159 HOH HOH . I 4 HOH B 23 623 160 HOH HOH . I 4 HOH B 24 624 139 HOH HOH . I 4 HOH B 25 625 47 HOH HOH . I 4 HOH B 26 626 29 HOH HOH . I 4 HOH B 27 627 10 HOH HOH . I 4 HOH B 28 628 146 HOH HOH . I 4 HOH B 29 629 96 HOH HOH . I 4 HOH B 30 630 48 HOH HOH . I 4 HOH B 31 631 86 HOH HOH . I 4 HOH B 32 632 75 HOH HOH . I 4 HOH B 33 633 73 HOH HOH . I 4 HOH B 34 634 113 HOH HOH . I 4 HOH B 35 635 141 HOH HOH . I 4 HOH B 36 636 72 HOH HOH . I 4 HOH B 37 637 142 HOH HOH . I 4 HOH B 38 638 23 HOH HOH . I 4 HOH B 39 639 76 HOH HOH . I 4 HOH B 40 640 136 HOH HOH . I 4 HOH B 41 641 99 HOH HOH . I 4 HOH B 42 642 107 HOH HOH . I 4 HOH B 43 643 116 HOH HOH . I 4 HOH B 44 644 92 HOH HOH . I 4 HOH B 45 645 114 HOH HOH . I 4 HOH B 46 646 68 HOH HOH . I 4 HOH B 47 647 140 HOH HOH . I 4 HOH B 48 648 152 HOH HOH . I 4 HOH B 49 649 123 HOH HOH . I 4 HOH B 50 650 16 HOH HOH . I 4 HOH B 51 651 50 HOH HOH . I 4 HOH B 52 652 46 HOH HOH . I 4 HOH B 53 653 63 HOH HOH . I 4 HOH B 54 654 49 HOH HOH . I 4 HOH B 55 655 115 HOH HOH . I 4 HOH B 56 656 85 HOH HOH . I 4 HOH B 57 657 40 HOH HOH . I 4 HOH B 58 658 80 HOH HOH . I 4 HOH B 59 659 154 HOH HOH . I 4 HOH B 60 660 9 HOH HOH . I 4 HOH B 61 661 134 HOH HOH . I 4 HOH B 62 662 19 HOH HOH . I 4 HOH B 63 663 94 HOH HOH . I 4 HOH B 64 664 120 HOH HOH . I 4 HOH B 65 665 132 HOH HOH . I 4 HOH B 66 666 131 HOH HOH . I 4 HOH B 67 667 83 HOH HOH . I 4 HOH B 68 668 81 HOH HOH . I 4 HOH B 69 669 21 HOH HOH . I 4 HOH B 70 670 135 HOH HOH . I 4 HOH B 71 671 95 HOH HOH . I 4 HOH B 72 672 31 HOH HOH . I 4 HOH B 73 673 106 HOH HOH . I 4 HOH B 74 674 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . G 3 -25.993 1.444 -3.936 0.9 84.72 ? PA NAD 502 B 1 HETATM 2 O O1A NAD . . . G 3 -26.322 2.779 -4.522 0.9 83.42 -1 O1A NAD 502 B 1 HETATM 3 O O2A NAD . . . G 3 -26.892 0.354 -4.432 0.9 90.34 ? O2A NAD 502 B 1 HETATM 4 O O5B NAD . . . G 3 -25.987 1.536 -2.321 0.9 91.3 ? O5B NAD 502 B 1 HETATM 5 C C5B NAD . . . G 3 -26.044 2.742 -1.472 0.9 91.21 ? C5B NAD 502 B 1 HETATM 6 C C4B NAD . . . G 3 -27.334 2.739 -0.669 0.9 90.87 ? C4B NAD 502 B 1 HETATM 7 O O4B NAD . . . G 3 -27.177 3.456 0.578 0.9 87.47 ? O4B NAD 502 B 1 HETATM 8 C C3B NAD . . . G 3 -28.515 3.456 -1.332 0.9 92.36 ? C3B NAD 502 B 1 HETATM 9 O O3B NAD . . . G 3 -29.29 2.561 -2.117 0.9 102.42 ? O3B NAD 502 B 1 HETATM 10 C C2B NAD . . . G 3 -29.326 4.033 -0.172 0.9 85.56 ? C2B NAD 502 B 1 HETATM 11 O O2B NAD . . . G 3 -30.498 3.282 -0.023 0.9 85.69 ? O2B NAD 502 B 1 HETATM 12 C C1B NAD . . . G 3 -28.464 3.763 1.054 0.9 85.1 ? C1B NAD 502 B 1 HETATM 13 N N9A NAD . . . G 3 -28.385 4.874 2 0.9 84.23 ? N9A NAD 502 B 1 HETATM 14 C C8A NAD . . . G 3 -27.924 4.814 3.295 0.9 82.43 ? C8A NAD 502 B 1 HETATM 15 N N7A NAD . . . G 3 -27.971 5.959 3.934 0.9 79.13 ? N7A NAD 502 B 1 HETATM 16 C C5A NAD . . . G 3 -28.518 6.835 3.007 0.9 79.74 ? C5A NAD 502 B 1 HETATM 17 C C6A NAD . . . G 3 -28.834 8.206 3.075 0.9 78.77 ? C6A NAD 502 B 1 HETATM 18 N N6A NAD . . . G 3 -28.652 8.963 4.151 0.9 76.88 ? N6A NAD 502 B 1 HETATM 19 N N1A NAD . . . G 3 -29.389 8.769 1.976 0.9 85.07 ? N1A NAD 502 B 1 HETATM 20 C C2A NAD . . . G 3 -29.59 8.011 0.885 0.9 87.71 ? C2A NAD 502 B 1 HETATM 21 N N3A NAD . . . G 3 -29.319 6.721 0.699 0.9 85.31 ? N3A NAD 502 B 1 HETATM 22 C C4A NAD . . . G 3 -28.779 6.18 1.81 0.9 83.56 ? C4A NAD 502 B 1 HETATM 23 O O3 NAD . . . G 3 -24.458 0.966 -4.051 0.9 86.38 ? O3 NAD 502 B 1 HETATM 24 P PN NAD . . . G 3 -23.134 1.861 -4.234 0.9 89.62 ? PN NAD 502 B 1 HETATM 25 O O1N NAD . . . G 3 -23.688 3.214 -4.543 0.9 97.54 -1 O1N NAD 502 B 1 HETATM 26 O O2N NAD . . . G 3 -22.209 1.235 -5.238 0.9 91.24 ? O2N NAD 502 B 1 HETATM 27 O O5D NAD . . . G 3 -22.395 1.966 -2.815 0.9 83.06 ? O5D NAD 502 B 1 HETATM 28 C C5D NAD . . . G 3 -22.351 3.322 -2.216 0.9 86.75 ? C5D NAD 502 B 1 HETATM 29 C C4D NAD . . . G 3 -21.031 4.048 -2.444 0.9 82.73 ? C4D NAD 502 B 1 HETATM 30 O O4D NAD . . . G 3 -19.91 3.151 -2.37 0.9 81.81 ? O4D NAD 502 B 1 HETATM 31 C C3D NAD . . . G 3 -20.823 4.764 -3.782 0.9 84.36 ? C3D NAD 502 B 1 HETATM 32 O O3D NAD . . . G 3 -21.487 6.018 -3.775 0.9 88.15 ? O3D NAD 502 B 1 HETATM 33 C C2D NAD . . . G 3 -19.299 4.927 -3.82 0.9 81.42 ? C2D NAD 502 B 1 HETATM 34 O O2D NAD . . . G 3 -18.887 6.082 -3.1 0.9 85.76 ? O2D NAD 502 B 1 HETATM 35 C C1D NAD . . . G 3 -18.79 3.689 -3.092 0.9 77.65 ? C1D NAD 502 B 1 HETATM 36 N N1N NAD . . . G 3 -18.23 2.61 -3.968 0.9 69.05 ? N1N NAD 502 B 1 HETATM 37 C C2N NAD . . . G 3 -16.956 2.131 -3.751 0.9 68.39 ? C2N NAD 502 B 1 HETATM 38 C C3N NAD . . . G 3 -16.738 0.742 -3.895 0.9 71.46 ? C3N NAD 502 B 1 HETATM 39 C C7N NAD . . . G 3 -15.428 0.08 -3.48 0.9 75.8 ? C7N NAD 502 B 1 HETATM 40 O O7N NAD . . . G 3 -15.382 -1.139 -3.314 0.9 79.65 ? O7N NAD 502 B 1 HETATM 41 N N7N NAD . . . G 3 -14.348 0.84 -3.339 0.9 70.53 ? N7N NAD 502 B 1 HETATM 42 C C4N NAD . . . G 3 -17.759 -0.016 -4.473 0.9 66.92 ? C4N NAD 502 B 1 HETATM 43 C C5N NAD . . . G 3 -18.789 0.636 -5.12 0.9 69.59 ? C5N NAD 502 B 1 HETATM 44 C C6N NAD . . . G 3 -19.002 1.973 -4.857 0.9 69.43 ? C6N NAD 502 B 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 606 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 44 #