data_7X24 # _model_server_result.job_id VbwnBA5D-JYoAXYyTmQ4iA _model_server_result.datetime_utc '2024-10-15 15:23:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1106}' # _entry.id 7X24 # _exptl.entry_id 7X24 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 787.121 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7X24 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 146 B CYS 126 1_555 B SG CYS 169 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 179 B CYS 159 1_555 B SG CYS 195 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 B SG CYS 234 B CYS 214 1_555 B SG CYS 297 B CYS 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 B ND2 ASN 178 B ASN 158 1_555 O C1 NAG . B NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? metalc ? metalc1 A O ALA 292 A ALA 342 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc2 A O VAL 294 A VAL 344 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.067 ? metalc ? metalc3 A OD2 ASP 338 A ASP 388 1_555 N MG MG . A MG 1112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc4 A O THR 340 A THR 390 1_555 N MG MG . A MG 1112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc5 A OD1 ASP 679 A ASP 729 1_555 N MG MG . A MG 1112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc6 A O LYS 688 A LYS 738 1_555 E K K . A K 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.142 ? metalc ? metalc7 A O ALA 690 A ALA 740 1_555 E K K . A K 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc8 A OD1 ASP 709 A ASP 759 1_555 E K K . A K 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc9 A O THR 741 A THR 791 1_555 D K K . A K 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc10 A OG SER 744 A SER 794 1_555 D K K . A K 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc11 A OD1 ASN 745 A ASN 795 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc12 A OD1 ASN 745 A ASN 795 1_555 D K K . A K 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? metalc ? metalc13 A OE1 GLU 748 A GLU 798 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc14 A OD1 ASP 773 A ASP 823 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc15 A OD2 ASP 773 A ASP 823 1_555 C K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc16 A OD1 ASP 773 A ASP 823 1_555 D K K . A K 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? # _chem_comp.formula 'C44 H85 N O8 P 1' _chem_comp.formula_weight 787.121 _chem_comp.id PCW _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (Z,Z)-4-HYDROXY-N,N,N-TRIMETHYL-10-OXO-7-[(1-OXO-9-OCTADECENYL)OXY]-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-18-EN-1-AMINIUM-4-OXIDE # _atom_sites.entry_id 7X24 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K A 1 1101 1 K K . D 3 K A 1 1102 2 K K . E 3 K A 1 1103 3 K K . F 4 PCW A 1 1104 2 PCW PCW . G 5 CLR A 1 1105 3 CLR CLR . H 4 PCW A 1 1106 4 PCW PCW . I 5 CLR A 1 1107 5 CLR CLR . J 4 PCW A 1 1108 6 PCW PCW . K 4 PCW A 1 1109 7 PCW PCW . L 4 PCW A 1 1110 8 PCW PCW . M 6 ALF A 1 1111 10 ALF ALF . N 7 MG A 1 1112 11 MG MG . O 8 NAG B 1 401 306 NAG NAG . P 5 CLR B 1 402 1 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PCW . . . H 4 129.165 112.488 81.038 1 21.63 ? C1 PCW 1106 A 1 HETATM 2 C C2 PCW . . . H 4 128.965 113.958 81.387 1 21.63 ? C2 PCW 1106 A 1 HETATM 3 C C3 PCW . . . H 4 129.657 114.257 82.713 1 21.63 ? C3 PCW 1106 A 1 HETATM 4 C C4 PCW . . . H 4 128.11 107.796 81.683 1 21.63 ? C4 PCW 1106 A 1 HETATM 5 C C5 PCW . . . H 4 128.768 106.777 82.607 1 21.63 ? C5 PCW 1106 A 1 HETATM 6 C C6 PCW . . . H 4 131.024 107.525 82.217 1 21.63 ? C6 PCW 1106 A 1 HETATM 7 C C7 PCW . . . H 4 130.598 105.27 82.909 1 21.63 ? C7 PCW 1106 A 1 HETATM 8 C C8 PCW . . . H 4 130.008 105.976 80.707 1 21.63 ? C8 PCW 1106 A 1 HETATM 9 C C11 PCW . . . H 4 129.282 113.933 85.162 1 21.63 ? C11 PCW 1106 A 1 HETATM 10 C C12 PCW . . . H 4 128.328 113.706 86.312 1 21.63 ? C12 PCW 1106 A 1 HETATM 11 C C13 PCW . . . H 4 127.567 112.401 86.108 1 21.63 ? C13 PCW 1106 A 1 HETATM 12 C C14 PCW . . . H 4 126.317 112.627 85.267 1 21.63 ? C14 PCW 1106 A 1 HETATM 13 C C15 PCW . . . H 4 125.336 113.545 85.988 1 21.63 ? C15 PCW 1106 A 1 HETATM 14 C C16 PCW . . . H 4 124.313 114.12 85.017 1 21.63 ? C16 PCW 1106 A 1 HETATM 15 C C17 PCW . . . H 4 123.016 114.447 85.742 1 21.63 ? C17 PCW 1106 A 1 HETATM 16 C C18 PCW . . . H 4 122.012 115.13 84.823 1 21.63 ? C18 PCW 1106 A 1 HETATM 17 C C19 PCW . . . H 4 120.686 115.152 85.54 1 21.63 ? C19 PCW 1106 A 1 HETATM 18 C C20 PCW . . . H 4 120.168 116.292 85.981 1 21.63 ? C20 PCW 1106 A 1 HETATM 19 C C21 PCW . . . H 4 118.842 116.269 86.703 1 21.63 ? C21 PCW 1106 A 1 HETATM 20 C C22 PCW . . . H 4 119.102 116.598 88.167 1 21.63 ? C22 PCW 1106 A 1 HETATM 21 C C23 PCW . . . H 4 117.862 116.378 89.022 1 21.63 ? C23 PCW 1106 A 1 HETATM 22 C C24 PCW . . . H 4 118.161 116.711 90.478 1 21.63 ? C24 PCW 1106 A 1 HETATM 23 C C25 PCW . . . H 4 116.878 116.891 91.277 1 21.63 ? C25 PCW 1106 A 1 HETATM 24 C C26 PCW . . . H 4 117.164 117.609 92.588 1 21.63 ? C26 PCW 1106 A 1 HETATM 25 C C27 PCW . . . H 4 115.874 117.966 93.313 1 21.63 ? C27 PCW 1106 A 1 HETATM 26 C C28 PCW . . . H 4 116.163 118.804 94.538 1 21.63 ? C28 PCW 1106 A 1 HETATM 27 C C31 PCW . . . H 4 128.725 114.777 79.132 1 21.63 ? C31 PCW 1106 A 1 HETATM 28 C C32 PCW . . . H 4 127.684 115.84 78.864 1 21.63 ? C32 PCW 1106 A 1 HETATM 29 C C33 PCW . . . H 4 128.316 117.225 78.92 1 21.63 ? C33 PCW 1106 A 1 HETATM 30 C C34 PCW . . . H 4 127.265 118.309 78.706 1 21.63 ? C34 PCW 1106 A 1 HETATM 31 C C35 PCW . . . H 4 126.167 118.234 79.761 1 21.63 ? C35 PCW 1106 A 1 HETATM 32 C C36 PCW . . . H 4 125.144 119.344 79.556 1 21.63 ? C36 PCW 1106 A 1 HETATM 33 C C37 PCW . . . H 4 123.992 119.243 80.549 1 21.63 ? C37 PCW 1106 A 1 HETATM 34 C C38 PCW . . . H 4 122.941 120.308 80.256 1 21.63 ? C38 PCW 1106 A 1 HETATM 35 C C39 PCW . . . H 4 121.666 120.004 81.007 1 21.63 ? C39 PCW 1106 A 1 HETATM 36 C C40 PCW . . . H 4 121.04 120.968 81.675 1 21.63 ? C40 PCW 1106 A 1 HETATM 37 C C41 PCW . . . H 4 119.765 120.665 82.422 1 21.63 ? C41 PCW 1106 A 1 HETATM 38 C C42 PCW . . . H 4 119.864 121.184 83.851 1 21.63 ? C42 PCW 1106 A 1 HETATM 39 C C43 PCW . . . H 4 118.495 121.152 84.52 1 21.63 ? C43 PCW 1106 A 1 HETATM 40 C C44 PCW . . . H 4 118.563 121.629 85.965 1 21.63 ? C44 PCW 1106 A 1 HETATM 41 C C45 PCW . . . H 4 117.171 121.661 86.583 1 21.63 ? C45 PCW 1106 A 1 HETATM 42 C C46 PCW . . . H 4 117.241 121.941 88.078 1 21.63 ? C46 PCW 1106 A 1 HETATM 43 C C47 PCW . . . H 4 115.842 122.109 88.656 1 21.63 ? C47 PCW 1106 A 1 HETATM 44 C C48 PCW . . . H 4 115.884 122.263 90.16 1 21.63 ? C48 PCW 1106 A 1 HETATM 45 N N PCW . . . H 4 130.096 106.393 82.109 1 21.63 ? N PCW 1106 A 1 HETATM 46 O O2 PCW . . . H 4 129.502 114.8 80.364 1 21.63 ? O2 PCW 1106 A 1 HETATM 47 O O3 PCW . . . H 4 128.807 113.867 83.79 1 21.63 ? O3 PCW 1106 A 1 HETATM 48 O O11 PCW . . . H 4 130.459 114.173 85.374 1 21.63 ? O11 PCW 1106 A 1 HETATM 49 O O31 PCW . . . H 4 128.935 113.907 78.303 1 21.63 ? O31 PCW 1106 A 1 HETATM 50 O O1P PCW . . . H 4 128.136 110.209 79.899 1 21.63 ? O1P PCW 1106 A 1 HETATM 51 O O2P PCW . . . H 4 126.216 110.46 81.621 1 21.63 ? O2P PCW 1106 A 1 HETATM 52 O O3P PCW . . . H 4 128.44 111.645 81.932 1 21.63 ? O3P PCW 1106 A 1 HETATM 53 O O4P PCW . . . H 4 128.299 109.122 82.169 1 21.63 ? O4P PCW 1106 A 1 HETATM 54 P P PCW . . . H 4 127.691 110.354 81.333 1 21.63 ? P PCW 1106 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 54 #