data_7X2Q
#
_model_server_result.job_id            wVaMyULDo2NfZZo-v-cE6Q 
_model_server_result.datetime_utc      '2024-10-10 01:19:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7x2q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    7X2Q 
#
_exptl.entry_id    7X2Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7X2Q 
_cell.length_a            151.1 
_cell.length_b            151.1 
_cell.length_c            156.91 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7X2Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    'P 6c 2c' 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            C 
_struct_conn.ptnr1_label_atom_id            FE 
_struct_conn.ptnr1_label_comp_id            HEM 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             HEM 
_struct_conn.ptnr1_auth_seq_id              501 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            E 
_struct_conn.ptnr2_label_atom_id            O 
_struct_conn.ptnr2_label_comp_id            HOH 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HOH 
_struct_conn.ptnr2_auth_seq_id              609 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.337 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7X2Q 
_atom_sites.fract_transf_matrix[1][1]    0.006618 
_atom_sites.fract_transf_matrix[1][2]    0.003821 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007642 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006373 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 501 501 HEM HEM . 
D 2 HEM B 1 501 501 HEM HEM . 
E 3 HOH A 1 601 14 HOH HOH . 
E 3 HOH A 2 602 12 HOH HOH . 
E 3 HOH A 3 603 9 HOH HOH . 
E 3 HOH A 4 604 2 HOH HOH . 
E 3 HOH A 5 605 7 HOH HOH . 
E 3 HOH A 6 606 6 HOH HOH . 
E 3 HOH A 7 607 16 HOH HOH . 
E 3 HOH A 8 608 8 HOH HOH . 
E 3 HOH A 9 609 3 HOH HOH . 
E 3 HOH A 10 610 15 HOH HOH . 
E 3 HOH A 11 611 18 HOH HOH . 
F 3 HOH B 1 601 4 HOH HOH . 
F 3 HOH B 2 602 1 HOH HOH . 
F 3 HOH B 3 603 13 HOH HOH . 
F 3 HOH B 4 604 10 HOH HOH . 
F 3 HOH B 5 605 11 HOH HOH . 
F 3 HOH B 6 606 17 HOH HOH . 
F 3 HOH B 7 607 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . D 2 -79.428 -3.106 -15.967 1 65.99 ? CHA HEM 501 B 1 
HETATM 2 C CHB HEM . . . D 2 -75.245 -5.092 -17.434 1 64.89 ? CHB HEM 501 B 1 
HETATM 3 C CHC HEM . . . D 2 -77.412 -9.413 -17.804 1 65.89 ? CHC HEM 501 B 1 
HETATM 4 C CHD HEM . . . D 2 -81.692 -7.137 -17.469 1 56.21 ? CHD HEM 501 B 1 
HETATM 5 C C1A HEM . . . D 2 -78.082 -3.285 -16.222 1 65.03 ? C1A HEM 501 B 1 
HETATM 6 C C2A HEM . . . D 2 -77.001 -2.364 -15.922 1 66.63 ? C2A HEM 501 B 1 
HETATM 7 C C3A HEM . . . D 2 -75.853 -2.916 -16.328 1 70.63 ? C3A HEM 501 B 1 
HETATM 8 C C4A HEM . . . D 2 -76.156 -4.208 -16.899 1 71.45 ? C4A HEM 501 B 1 
HETATM 9 C CMA HEM . . . D 2 -74.441 -2.3 -16.218 1 68.36 ? CMA HEM 501 B 1 
HETATM 10 C CAA HEM . . . D 2 -77.153 -0.985 -15.253 1 70.5 ? CAA HEM 501 B 1 
HETATM 11 C CBA HEM . . . D 2 -76.669 -1.072 -13.812 1 69.8 ? CBA HEM 501 B 1 
HETATM 12 C CGA HEM . . . D 2 -76.603 0.307 -13.218 1 57.01 ? CGA HEM 501 B 1 
HETATM 13 O O1A HEM . . . D 2 -76.108 0.433 -12.07 1 58.39 ? O1A HEM 501 B 1 
HETATM 14 O O2A HEM . . . D 2 -77.045 1.277 -13.889 1 52.1 ? O2A HEM 501 B 1 
HETATM 15 C C1B HEM . . . D 2 -75.435 -6.447 -17.582 1 61.18 ? C1B HEM 501 B 1 
HETATM 16 C C2B HEM . . . D 2 -74.399 -7.438 -17.758 1 57.48 ? C2B HEM 501 B 1 
HETATM 17 C C3B HEM . . . D 2 -74.974 -8.636 -17.867 1 51.81 ? C3B HEM 501 B 1 
HETATM 18 C C4B HEM . . . D 2 -76.417 -8.453 -17.755 1 58.31 ? C4B HEM 501 B 1 
HETATM 19 C CMB HEM . . . D 2 -72.886 -7.156 -17.816 1 60.59 ? CMB HEM 501 B 1 
HETATM 20 C CAB HEM . . . D 2 -74.177 -9.946 -18.063 1 45.23 ? CAB HEM 501 B 1 
HETATM 21 C CBB HEM . . . D 2 -74.756 -11.074 -18.487 1 58.16 ? CBB HEM 501 B 1 
HETATM 22 C C1C HEM . . . D 2 -78.772 -9.185 -17.701 1 63.91 ? C1C HEM 501 B 1 
HETATM 23 C C2C HEM . . . D 2 -79.81 -10.197 -17.636 1 42.62 ? C2C HEM 501 B 1 
HETATM 24 C C3C HEM . . . D 2 -80.998 -9.566 -17.539 1 46.89 ? C3C HEM 501 B 1 
HETATM 25 C C4C HEM . . . D 2 -80.744 -8.138 -17.547 1 62.24 ? C4C HEM 501 B 1 
HETATM 26 C CMC HEM . . . D 2 -79.515 -11.716 -17.671 1 38.53 ? CMC HEM 501 B 1 
HETATM 27 C CAC HEM . . . D 2 -82.432 -10.149 -17.448 1 55.45 ? CAC HEM 501 B 1 
HETATM 28 C CBC HEM . . . D 2 -82.713 -11.434 -17.208 1 59.63 ? CBC HEM 501 B 1 
HETATM 29 C C1D HEM . . . D 2 -81.472 -5.856 -17 1 54.4 ? C1D HEM 501 B 1 
HETATM 30 C C2D HEM . . . D 2 -82.482 -4.876 -16.662 1 50.07 ? C2D HEM 501 B 1 
HETATM 31 C C3D HEM . . . D 2 -81.867 -3.761 -16.24 1 50.66 ? C3D HEM 501 B 1 
HETATM 32 C C4D HEM . . . D 2 -80.433 -3.992 -16.305 1 55.14 ? C4D HEM 501 B 1 
HETATM 33 C CMD HEM . . . D 2 -84.004 -5.102 -16.766 1 44.79 ? CMD HEM 501 B 1 
HETATM 34 C CAD HEM . . . D 2 -82.571 -2.46 -15.778 1 52.76 ? CAD HEM 501 B 1 
HETATM 35 C CBD HEM . . . D 2 -82.366 -2.263 -14.275 1 54.13 ? CBD HEM 501 B 1 
HETATM 36 C CGD HEM . . . D 2 -82.933 -0.942 -13.818 1 48.21 ? CGD HEM 501 B 1 
HETATM 37 O O1D HEM . . . D 2 -83.285 -0.827 -12.617 1 52.41 ? O1D HEM 501 B 1 
HETATM 38 O O2D HEM . . . D 2 -83.041 -0.006 -14.649 1 47.56 ? O2D HEM 501 B 1 
HETATM 39 N NA HEM . . . D 2 -77.522 -4.4 -16.817 1 74.77 ? NA HEM 501 B 1 
HETATM 40 N NB HEM . . . D 2 -76.649 -7.101 -17.585 1 56.6 ? NB HEM 501 B 1 
HETATM 41 N NC HEM . . . D 2 -79.38 -7.945 -17.644 1 73.78 ? NC HEM 501 B 1 
HETATM 42 N ND HEM . . . D 2 -80.236 -5.282 -16.771 1 54.56 ? ND HEM 501 B 1 
HETATM 43 FE FE HEM . . . D 2 -78.439 -6.175 -17.2 1 63.66 ? FE HEM 501 B 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#