data_7X3Z
#
_model_server_result.job_id            DMdfx1U26mbovJz51ZM7hA 
_model_server_result.datetime_utc      '2024-11-18 09:42:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7x3z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    7X3Z 
#
_exptl.entry_id    7X3Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7X3Z 
_cell.length_a            43.05 
_cell.length_b            108.15 
_cell.length_c            117.04 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7X3Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 282 n n 
PA O2A NAD sing 283 n n 
PA O5B NAD sing 284 n n 
PA O3 NAD sing 285 n n 
O2A HOA2 NAD sing 286 n n 
O5B C5B NAD sing 287 n n 
C5B C4B NAD sing 288 n n 
C5B H51A NAD sing 289 n n 
C5B H52A NAD sing 290 n n 
C4B O4B NAD sing 291 n n 
C4B C3B NAD sing 292 n n 
C4B H4B NAD sing 293 n n 
O4B C1B NAD sing 294 n n 
C3B O3B NAD sing 295 n n 
C3B C2B NAD sing 296 n n 
C3B H3B NAD sing 297 n n 
O3B HO3A NAD sing 298 n n 
C2B O2B NAD sing 299 n n 
C2B C1B NAD sing 300 n n 
C2B H2B NAD sing 301 n n 
O2B HO2A NAD sing 302 n n 
C1B N9A NAD sing 303 n n 
C1B H1B NAD sing 304 n n 
N9A C8A NAD sing 305 n y 
N9A C4A NAD sing 306 n y 
C8A N7A NAD doub 307 n y 
C8A H8A NAD sing 308 n n 
N7A C5A NAD sing 309 n y 
C5A C6A NAD sing 310 n y 
C5A C4A NAD doub 311 n y 
C6A N6A NAD sing 312 n n 
C6A N1A NAD doub 313 n y 
N6A H61A NAD sing 314 n n 
N6A H62A NAD sing 315 n n 
N1A C2A NAD sing 316 n y 
C2A N3A NAD doub 317 n y 
C2A H2A NAD sing 318 n n 
N3A C4A NAD sing 319 n y 
O3 PN NAD sing 320 n n 
PN O1N NAD doub 321 n n 
PN O2N NAD sing 322 n n 
PN O5D NAD sing 323 n n 
O5D C5D NAD sing 324 n n 
C5D C4D NAD sing 325 n n 
C5D H51N NAD sing 326 n n 
C5D H52N NAD sing 327 n n 
C4D O4D NAD sing 328 n n 
C4D C3D NAD sing 329 n n 
C4D H4D NAD sing 330 n n 
O4D C1D NAD sing 331 n n 
C3D O3D NAD sing 332 n n 
C3D C2D NAD sing 333 n n 
C3D H3D NAD sing 334 n n 
O3D HO3N NAD sing 335 n n 
C2D O2D NAD sing 336 n n 
C2D C1D NAD sing 337 n n 
C2D H2D NAD sing 338 n n 
O2D HO2N NAD sing 339 n n 
C1D N1N NAD sing 340 n n 
C1D H1D NAD sing 341 n n 
N1N C2N NAD sing 342 n y 
N1N C6N NAD doub 343 n y 
C2N C3N NAD doub 344 n y 
C2N H2N NAD sing 345 n n 
C3N C7N NAD sing 346 n n 
C3N C4N NAD sing 347 n y 
C7N O7N NAD doub 348 n n 
C7N N7N NAD sing 349 n n 
N7N H71N NAD sing 350 n n 
N7N H72N NAD sing 351 n n 
C4N C5N NAD doub 352 n y 
C4N H4N NAD sing 353 n n 
C5N C6N NAD sing 354 n y 
C5N H5N NAD sing 355 n n 
C6N H6N NAD sing 356 n n 
#
_atom_sites.entry_id                     7X3Z 
_atom_sites.fract_transf_matrix[1][1]    0.023229 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009246 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAD A 1 401 2 NAD NAD . 
D 2 NAD B 1 401 1 NAD NAD . 
E 3 J3Z B 1 402 1 J3Z J3Z . 
F 4 HOH A 1 501 69 HOH HOH . 
F 4 HOH A 2 502 68 HOH HOH . 
F 4 HOH A 3 503 74 HOH HOH . 
F 4 HOH A 4 504 14 HOH HOH . 
F 4 HOH A 5 505 31 HOH HOH . 
F 4 HOH A 6 506 45 HOH HOH . 
F 4 HOH A 7 507 20 HOH HOH . 
F 4 HOH A 8 508 22 HOH HOH . 
F 4 HOH A 9 509 64 HOH HOH . 
F 4 HOH A 10 510 34 HOH HOH . 
F 4 HOH A 11 511 36 HOH HOH . 
F 4 HOH A 12 512 62 HOH HOH . 
F 4 HOH A 13 513 37 HOH HOH . 
F 4 HOH A 14 514 42 HOH HOH . 
F 4 HOH A 15 515 19 HOH HOH . 
F 4 HOH A 16 516 54 HOH HOH . 
F 4 HOH A 17 517 60 HOH HOH . 
F 4 HOH A 18 518 9 HOH HOH . 
F 4 HOH A 19 519 12 HOH HOH . 
F 4 HOH A 20 520 15 HOH HOH . 
F 4 HOH A 21 521 18 HOH HOH . 
F 4 HOH A 22 522 23 HOH HOH . 
F 4 HOH A 23 523 51 HOH HOH . 
F 4 HOH A 24 524 6 HOH HOH . 
F 4 HOH A 25 525 46 HOH HOH . 
F 4 HOH A 26 526 21 HOH HOH . 
F 4 HOH A 27 527 72 HOH HOH . 
F 4 HOH A 28 528 30 HOH HOH . 
F 4 HOH A 29 529 11 HOH HOH . 
F 4 HOH A 30 530 53 HOH HOH . 
F 4 HOH A 31 531 1 HOH HOH . 
F 4 HOH A 32 532 55 HOH HOH . 
F 4 HOH A 33 533 25 HOH HOH . 
F 4 HOH A 34 534 57 HOH HOH . 
F 4 HOH A 35 535 3 HOH HOH . 
F 4 HOH A 36 536 67 HOH HOH . 
F 4 HOH A 37 537 4 HOH HOH . 
F 4 HOH A 38 538 43 HOH HOH . 
F 4 HOH A 39 539 8 HOH HOH . 
F 4 HOH A 40 540 49 HOH HOH . 
F 4 HOH A 41 541 58 HOH HOH . 
F 4 HOH A 42 542 41 HOH HOH . 
F 4 HOH A 43 543 47 HOH HOH . 
F 4 HOH A 44 544 78 HOH HOH . 
F 4 HOH A 45 545 76 HOH HOH . 
F 4 HOH A 46 546 39 HOH HOH . 
F 4 HOH A 47 547 48 HOH HOH . 
F 4 HOH A 48 548 77 HOH HOH . 
G 4 HOH B 1 501 50 HOH HOH . 
G 4 HOH B 2 502 32 HOH HOH . 
G 4 HOH B 3 503 61 HOH HOH . 
G 4 HOH B 4 504 71 HOH HOH . 
G 4 HOH B 5 505 26 HOH HOH . 
G 4 HOH B 6 506 52 HOH HOH . 
G 4 HOH B 7 507 66 HOH HOH . 
G 4 HOH B 8 508 13 HOH HOH . 
G 4 HOH B 9 509 28 HOH HOH . 
G 4 HOH B 10 510 5 HOH HOH . 
G 4 HOH B 11 511 17 HOH HOH . 
G 4 HOH B 12 512 27 HOH HOH . 
G 4 HOH B 13 513 75 HOH HOH . 
G 4 HOH B 14 514 56 HOH HOH . 
G 4 HOH B 15 515 65 HOH HOH . 
G 4 HOH B 16 516 2 HOH HOH . 
G 4 HOH B 17 517 7 HOH HOH . 
G 4 HOH B 18 518 38 HOH HOH . 
G 4 HOH B 19 519 59 HOH HOH . 
G 4 HOH B 20 520 24 HOH HOH . 
G 4 HOH B 21 521 16 HOH HOH . 
G 4 HOH B 22 522 40 HOH HOH . 
G 4 HOH B 23 523 63 HOH HOH . 
G 4 HOH B 24 524 44 HOH HOH . 
G 4 HOH B 25 525 70 HOH HOH . 
G 4 HOH B 26 526 29 HOH HOH . 
G 4 HOH B 27 527 79 HOH HOH . 
G 4 HOH B 28 528 35 HOH HOH . 
G 4 HOH B 29 529 33 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O5B NAD . . . D 2 9.566 -15.816 23.871 1 84.38 ? O5B NAD 401 B 1 
HETATM 2 C C5B NAD . . . D 2 10.535 -15.127 23.031 1 81.15 ? C5B NAD 401 B 1 
HETATM 3 C C4B NAD . . . D 2 11.218 -16.106 22.104 1 72.99 ? C4B NAD 401 B 1 
HETATM 4 O O4B NAD . . . D 2 11.812 -15.357 21.006 1 76.1 ? O4B NAD 401 B 1 
HETATM 5 C C3B NAD . . . D 2 12.369 -16.939 22.708 1 71.73 ? C3B NAD 401 B 1 
HETATM 6 O O3B NAD . . . D 2 12.267 -18.337 22.436 1 67.89 ? O3B NAD 401 B 1 
HETATM 7 C C2B NAD . . . D 2 13.615 -16.363 22.024 1 70.5 ? C2B NAD 401 B 1 
HETATM 8 O O2B NAD . . . D 2 14.694 -17.267 21.888 1 68.25 ? O2B NAD 401 B 1 
HETATM 9 C C1B NAD . . . D 2 13.028 -15.975 20.671 1 64.45 ? C1B NAD 401 B 1 
HETATM 10 N N9A NAD . . . D 2 13.919 -15.101 19.91 1 59.42 ? N9A NAD 401 B 1 
HETATM 11 C C8A NAD . . . D 2 14.479 -13.917 20.337 1 53.24 ? C8A NAD 401 B 1 
HETATM 12 N N7A NAD . . . D 2 15.352 -13.423 19.49 1 48.61 ? N7A NAD 401 B 1 
HETATM 13 C C5A NAD . . . D 2 15.38 -14.335 18.434 1 50 ? C5A NAD 401 B 1 
HETATM 14 C C6A NAD . . . D 2 16.112 -14.381 17.216 1 44.98 ? C6A NAD 401 B 1 
HETATM 15 N N6A NAD . . . D 2 16.993 -13.449 16.839 1 38.44 ? N6A NAD 401 B 1 
HETATM 16 N N1A NAD . . . D 2 15.91 -15.448 16.397 1 38.88 ? N1A NAD 401 B 1 
HETATM 17 C C2A NAD . . . D 2 15.031 -16.388 16.774 1 47.08 ? C2A NAD 401 B 1 
HETATM 18 N N3A NAD . . . D 2 14.31 -16.461 17.892 1 51.48 ? N3A NAD 401 B 1 
HETATM 19 C C4A NAD . . . D 2 14.522 -15.392 18.696 1 52.88 ? C4A NAD 401 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           19 
#