data_7X3Z # _model_server_result.job_id XSylbckf6GeNAgqPQlsdZA _model_server_result.datetime_utc '2025-03-04 22:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":402}' # _entry.id 7X3Z # _exptl.entry_id 7X3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.366 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7X3Z _cell.length_a 43.05 _cell.length_b 108.15 _cell.length_c 117.04 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H22 O2' _chem_comp.formula_weight 270.366 _chem_comp.id J3Z _chem_comp.mon_nstd_flag . _chem_comp.name (9beta,13alpha)-3-hydroxyestra-1,3,5(10)-trien-17-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Estrone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C9 J3Z sing 173 n n C8 C7 J3Z sing 174 n n O1 C7 J3Z doub 175 n n C9 C10 J3Z sing 176 n n C7 C5 J3Z sing 177 n n C6 C5 J3Z sing 178 n n C5 C10 J3Z sing 179 n n C5 C4 J3Z sing 180 n n C10 C12 J3Z sing 181 n n C14 C12 J3Z sing 182 n n C14 C15 J3Z sing 183 n n C12 C2 J3Z sing 184 n n C4 C3 J3Z sing 185 n n C15 C16 J3Z sing 186 n n C2 C3 J3Z sing 187 n n C2 C21 J3Z sing 188 n n C16 C21 J3Z doub 189 n y C16 C17 J3Z sing 190 n y C21 C20 J3Z sing 191 n y C17 C18 J3Z doub 192 n y C20 C19 J3Z doub 193 n y C18 C19 J3Z sing 194 n y C18 O3 J3Z sing 195 n n C2 H2 J3Z sing 196 n n C4 H14 J3Z sing 197 n n C4 H24 J3Z sing 198 n n C6 H16 J3Z sing 199 n n C6 H26 J3Z sing 200 n n C6 H36 J3Z sing 201 n n O3 HO3 J3Z sing 202 n n C8 H18 J3Z sing 203 n n C8 H28 J3Z sing 204 n n C9 H19 J3Z sing 205 n n C9 H29 J3Z sing 206 n n C10 H10 J3Z sing 207 n n C12 H12 J3Z sing 208 n n C3 H13 J3Z sing 209 n n C3 H23 J3Z sing 210 n n C14 H114 J3Z sing 211 n n C14 H214 J3Z sing 212 n n C15 H115 J3Z sing 213 n n C15 H215 J3Z sing 214 n n C17 H17 J3Z sing 215 n n C19 H19A J3Z sing 216 n n C20 H20 J3Z sing 217 n n # _atom_sites.entry_id 7X3Z _atom_sites.fract_transf_matrix[1][1] 0.023229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 401 2 NAD NAD . D 2 NAD B 1 401 1 NAD NAD . E 3 J3Z B 1 402 1 J3Z J3Z . F 4 HOH A 1 501 69 HOH HOH . F 4 HOH A 2 502 68 HOH HOH . F 4 HOH A 3 503 74 HOH HOH . F 4 HOH A 4 504 14 HOH HOH . F 4 HOH A 5 505 31 HOH HOH . F 4 HOH A 6 506 45 HOH HOH . F 4 HOH A 7 507 20 HOH HOH . F 4 HOH A 8 508 22 HOH HOH . F 4 HOH A 9 509 64 HOH HOH . F 4 HOH A 10 510 34 HOH HOH . F 4 HOH A 11 511 36 HOH HOH . F 4 HOH A 12 512 62 HOH HOH . F 4 HOH A 13 513 37 HOH HOH . F 4 HOH A 14 514 42 HOH HOH . F 4 HOH A 15 515 19 HOH HOH . F 4 HOH A 16 516 54 HOH HOH . F 4 HOH A 17 517 60 HOH HOH . F 4 HOH A 18 518 9 HOH HOH . F 4 HOH A 19 519 12 HOH HOH . F 4 HOH A 20 520 15 HOH HOH . F 4 HOH A 21 521 18 HOH HOH . F 4 HOH A 22 522 23 HOH HOH . F 4 HOH A 23 523 51 HOH HOH . F 4 HOH A 24 524 6 HOH HOH . F 4 HOH A 25 525 46 HOH HOH . F 4 HOH A 26 526 21 HOH HOH . F 4 HOH A 27 527 72 HOH HOH . F 4 HOH A 28 528 30 HOH HOH . F 4 HOH A 29 529 11 HOH HOH . F 4 HOH A 30 530 53 HOH HOH . F 4 HOH A 31 531 1 HOH HOH . F 4 HOH A 32 532 55 HOH HOH . F 4 HOH A 33 533 25 HOH HOH . F 4 HOH A 34 534 57 HOH HOH . F 4 HOH A 35 535 3 HOH HOH . F 4 HOH A 36 536 67 HOH HOH . F 4 HOH A 37 537 4 HOH HOH . F 4 HOH A 38 538 43 HOH HOH . F 4 HOH A 39 539 8 HOH HOH . F 4 HOH A 40 540 49 HOH HOH . F 4 HOH A 41 541 58 HOH HOH . F 4 HOH A 42 542 41 HOH HOH . F 4 HOH A 43 543 47 HOH HOH . F 4 HOH A 44 544 78 HOH HOH . F 4 HOH A 45 545 76 HOH HOH . F 4 HOH A 46 546 39 HOH HOH . F 4 HOH A 47 547 48 HOH HOH . F 4 HOH A 48 548 77 HOH HOH . G 4 HOH B 1 501 50 HOH HOH . G 4 HOH B 2 502 32 HOH HOH . G 4 HOH B 3 503 61 HOH HOH . G 4 HOH B 4 504 71 HOH HOH . G 4 HOH B 5 505 26 HOH HOH . G 4 HOH B 6 506 52 HOH HOH . G 4 HOH B 7 507 66 HOH HOH . G 4 HOH B 8 508 13 HOH HOH . G 4 HOH B 9 509 28 HOH HOH . G 4 HOH B 10 510 5 HOH HOH . G 4 HOH B 11 511 17 HOH HOH . G 4 HOH B 12 512 27 HOH HOH . G 4 HOH B 13 513 75 HOH HOH . G 4 HOH B 14 514 56 HOH HOH . G 4 HOH B 15 515 65 HOH HOH . G 4 HOH B 16 516 2 HOH HOH . G 4 HOH B 17 517 7 HOH HOH . G 4 HOH B 18 518 38 HOH HOH . G 4 HOH B 19 519 59 HOH HOH . G 4 HOH B 20 520 24 HOH HOH . G 4 HOH B 21 521 16 HOH HOH . G 4 HOH B 22 522 40 HOH HOH . G 4 HOH B 23 523 63 HOH HOH . G 4 HOH B 24 524 44 HOH HOH . G 4 HOH B 25 525 70 HOH HOH . G 4 HOH B 26 526 29 HOH HOH . G 4 HOH B 27 527 79 HOH HOH . G 4 HOH B 28 528 35 HOH HOH . G 4 HOH B 29 529 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 J3Z . . . E 3 -1.332 -5.659 28.947 1 62.73 ? C2 J3Z 402 B 1 HETATM 2 C C4 J3Z . . . E 3 -1.714 -3.987 30.882 1 63.16 ? C4 J3Z 402 B 1 HETATM 3 C C5 J3Z . . . E 3 -2.723 -3.241 30.009 1 64.43 ? C5 J3Z 402 B 1 HETATM 4 C C6 J3Z . . . E 3 -2.074 -2.013 29.323 1 62.58 ? C6 J3Z 402 B 1 HETATM 5 O O1 J3Z . . . E 3 -3.984 -2.124 31.769 1 63.49 ? O1 J3Z 402 B 1 HETATM 6 O O3 J3Z . . . E 3 2.414 -8.347 25.536 1 63.52 ? O3 J3Z 402 B 1 HETATM 7 C C7 J3Z . . . E 3 -3.962 -2.685 30.699 1 63.6 ? C7 J3Z 402 B 1 HETATM 8 C C8 J3Z . . . E 3 -5.169 -2.909 29.803 1 67.97 ? C8 J3Z 402 B 1 HETATM 9 C C9 J3Z . . . E 3 -4.612 -3.525 28.508 1 67.83 ? C9 J3Z 402 B 1 HETATM 10 C C10 J3Z . . . E 3 -3.37 -4.249 29.046 1 63.42 ? C10 J3Z 402 B 1 HETATM 11 C C12 J3Z . . . E 3 -2.377 -4.902 28.106 1 58.74 ? C12 J3Z 402 B 1 HETATM 12 C C3 J3Z . . . E 3 -0.701 -4.761 30.034 1 63.48 ? C3 J3Z 402 B 1 HETATM 13 C C14 J3Z . . . E 3 -3.04 -5.867 27.138 1 62.56 ? C14 J3Z 402 B 1 HETATM 14 C C15 J3Z . . . E 3 -2.032 -6.442 26.154 1 59.08 ? C15 J3Z 402 B 1 HETATM 15 C C16 J3Z . . . E 3 -0.674 -6.75 26.732 1 61.68 ? C16 J3Z 402 B 1 HETATM 16 C C21 J3Z . . . E 3 -0.326 -6.378 28.037 1 66.56 ? C21 J3Z 402 B 1 HETATM 17 C C17 J3Z . . . E 3 0.243 -7.408 25.905 1 57.58 ? C17 J3Z 402 B 1 HETATM 18 C C18 J3Z . . . E 3 1.52 -7.696 26.341 1 61.54 ? C18 J3Z 402 B 1 HETATM 19 C C19 J3Z . . . E 3 1.896 -7.341 27.626 1 67.5 ? C19 J3Z 402 B 1 HETATM 20 C C20 J3Z . . . E 3 0.977 -6.687 28.457 1 67.57 ? C20 J3Z 402 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 20 #