data_7X4W # _model_server_result.job_id mNjC6vICDOrbjBhayDUrrA _model_server_result.datetime_utc '2024-12-02 18:54:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x4w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 7X4W # _exptl.entry_id 7X4W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 146.141 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Dimethyl fumarate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7X4W _cell.length_a 84.538 _cell.length_b 99.105 _cell.length_c 143.136 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X4W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G,H 1 1 B,F,I 2 1 D 3 1 E 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_575 x+1/2,-y+5/2,-z 1 0 0 0 -1 0 0 0 -1 42.269 247.7625 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 110 A CYS 151 1_555 G C05 9HB . A 9HB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? covale ? covale2 C SG CYS 110 D CYS 151 1_555 H C06 9HB . D 9HB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? covale ? covale3 F SG CYS 110 B CYS 151 1_555 I C05 9HB . B 9HB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? # _chem_comp.formula 'C6 H10 O4' _chem_comp.formula_weight 146.141 _chem_comp.id 9HB _chem_comp.mon_nstd_flag . _chem_comp.name 'Dimethyl fumarate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 O09 9HB sing 1 n n O08 C07 9HB doub 2 n n O09 C07 9HB sing 3 n n C07 C06 9HB sing 4 n n C06 C05 9HB sing 5 n n C05 C03 9HB sing 6 n n C03 O02 9HB sing 7 n n C03 O04 9HB doub 8 n n O02 C01 9HB sing 9 n n C10 H1 9HB sing 10 n n C10 H2 9HB sing 11 n n C10 H3 9HB sing 12 n n C01 H4 9HB sing 13 n n C01 H5 9HB sing 14 n n C01 H6 9HB sing 15 n n C05 H7 9HB sing 16 n n C05 H8 9HB sing 17 n n C06 H9 9HB sing 18 n n C06 H10 9HB sing 19 n n # _atom_sites.entry_id 7X4W _atom_sites.fract_transf_matrix[1][1] 0.011829 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 9HB A 1 201 201 9HB LIG . H 2 9HB D 1 201 201 9HB LIG . I 2 9HB B 1 201 201 9HB LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 9HB . . . I 2 101.611 116.466 33.066 1 70.48 ? C10 9HB 201 B 1 HETATM 2 C C01 9HB . . . I 2 107.911 121.113 30.279 1 84.45 ? C01 9HB 201 B 1 HETATM 3 O O02 9HB . . . I 2 107.185 120.704 31.404 1 94.34 ? O02 9HB 201 B 1 HETATM 4 C C03 9HB . . . I 2 106.824 119.352 31.39 1 102.17 ? C03 9HB 201 B 1 HETATM 5 O O04 9HB . . . I 2 107.4 118.589 30.69 1 94.29 ? O04 9HB 201 B 1 HETATM 6 C C05 9HB . . . I 2 105.684 118.86 32.281 1 98.02 ? C05 9HB 201 B 1 HETATM 7 C C06 9HB . . . I 2 104.612 118.11 31.492 1 86.52 ? C06 9HB 201 B 1 HETATM 8 C C07 9HB . . . I 2 103.356 117.849 32.321 1 79.15 ? C07 9HB 201 B 1 HETATM 9 O O08 9HB . . . I 2 102.788 118.754 32.834 1 85.78 ? O08 9HB 201 B 1 HETATM 10 O O09 9HB . . . I 2 102.876 116.543 32.474 1 73.34 ? O09 9HB 201 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 10 #