data_7X5Z # _model_server_result.job_id eC_dU-VfH3VIk2PAwo_j6g _model_server_result.datetime_utc '2024-10-22 08:37:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7X5Z # _exptl.entry_id 7X5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 390.389 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazoline-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.2 _cell.angle_gamma 90 _cell.entry_id 7X5Z _cell.length_a 77.041 _cell.length_b 84.021 _cell.length_c 62.346 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -22.08105 0 122.721319 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 373 A CYS 401 1_555 A SG CYS 388 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A NE2 HIS 198 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc2 A NE2 HIS 280 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc3 A OE1 GLU 366 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O7 9WC . A 9WC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O23 9WC . A 9WC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc6 B CO CO . A CO 501 1_555 D O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'C22 H18 N2 O5' _chem_comp.formula_weight 390.389 _chem_comp.id 9WC _chem_comp.mon_nstd_flag . _chem_comp.name 1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazoline-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C6 9WC sing 1 n n O23 C9 9WC doub 2 n n C26 C25 9WC doub 3 n y C26 C27 9WC sing 4 n y C6 C1 9WC sing 5 n n C6 C5 9WC doub 6 n n C25 C24 9WC sing 7 n y C1 C2 9WC sing 8 n n O20 C16 9WC doub 9 n n C9 C5 9WC sing 10 n n C9 C10 9WC sing 11 n n C27 C28 9WC doub 12 n y C5 C4 9WC sing 13 n n C15 C10 9WC doub 14 n y C15 C14 9WC sing 15 n y C16 C14 9WC sing 16 n n C16 N18 9WC sing 17 n n C10 C11 9WC sing 18 n y C24 N18 9WC sing 19 n n C24 C29 9WC doub 20 n y C14 C13 9WC doub 21 n y C2 C3 9WC sing 22 n n N18 C19 9WC sing 23 n n C28 C29 9WC sing 24 n y C4 C3 9WC sing 25 n n C4 O8 9WC doub 26 n n C11 C12 9WC doub 27 n y C13 C12 9WC sing 28 n y C13 N17 9WC sing 29 n n C19 N17 9WC sing 30 n n C19 O21 9WC doub 31 n n N17 C22 9WC sing 32 n n C15 H1 9WC sing 33 n n C22 H2 9WC sing 34 n n C22 H3 9WC sing 35 n n C22 H4 9WC sing 36 n n C26 H5 9WC sing 37 n n C28 H6 9WC sing 38 n n C1 H7 9WC sing 39 n n C1 H8 9WC sing 40 n n C2 H9 9WC sing 41 n n C2 H10 9WC sing 42 n n C3 H11 9WC sing 43 n n C3 H12 9WC sing 44 n n C11 H13 9WC sing 45 n n C12 H14 9WC sing 46 n n C25 H15 9WC sing 47 n n C27 H16 9WC sing 48 n n C29 H17 9WC sing 49 n n O7 H18 9WC sing 50 n n # _atom_sites.entry_id 7X5Z _atom_sites.fract_transf_matrix[1][1] 0.01298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002335 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 1 CO CO . C 3 9WC A 1 502 501 9WC LIG . D 4 HOH A 1 601 143 HOH HOH . D 4 HOH A 2 602 56 HOH HOH . D 4 HOH A 3 603 73 HOH HOH . D 4 HOH A 4 604 139 HOH HOH . D 4 HOH A 5 605 87 HOH HOH . D 4 HOH A 6 606 166 HOH HOH . D 4 HOH A 7 607 156 HOH HOH . D 4 HOH A 8 608 65 HOH HOH . D 4 HOH A 9 609 155 HOH HOH . D 4 HOH A 10 610 132 HOH HOH . D 4 HOH A 11 611 128 HOH HOH . D 4 HOH A 12 612 185 HOH HOH . D 4 HOH A 13 613 31 HOH HOH . D 4 HOH A 14 614 55 HOH HOH . D 4 HOH A 15 615 90 HOH HOH . D 4 HOH A 16 616 168 HOH HOH . D 4 HOH A 17 617 120 HOH HOH . D 4 HOH A 18 618 118 HOH HOH . D 4 HOH A 19 619 130 HOH HOH . D 4 HOH A 20 620 28 HOH HOH . D 4 HOH A 21 621 79 HOH HOH . D 4 HOH A 22 622 46 HOH HOH . D 4 HOH A 23 623 154 HOH HOH . D 4 HOH A 24 624 82 HOH HOH . D 4 HOH A 25 625 127 HOH HOH . D 4 HOH A 26 626 45 HOH HOH . D 4 HOH A 27 627 122 HOH HOH . D 4 HOH A 28 628 91 HOH HOH . D 4 HOH A 29 629 140 HOH HOH . D 4 HOH A 30 630 16 HOH HOH . D 4 HOH A 31 631 124 HOH HOH . D 4 HOH A 32 632 77 HOH HOH . D 4 HOH A 33 633 108 HOH HOH . D 4 HOH A 34 634 142 HOH HOH . D 4 HOH A 35 635 176 HOH HOH . D 4 HOH A 36 636 100 HOH HOH . D 4 HOH A 37 637 58 HOH HOH . D 4 HOH A 38 638 29 HOH HOH . D 4 HOH A 39 639 15 HOH HOH . D 4 HOH A 40 640 7 HOH HOH . D 4 HOH A 41 641 41 HOH HOH . D 4 HOH A 42 644 119 HOH HOH . D 4 HOH A 43 645 43 HOH HOH . D 4 HOH A 44 646 105 HOH HOH . D 4 HOH A 45 647 17 HOH HOH . D 4 HOH A 46 648 14 HOH HOH . D 4 HOH A 47 649 25 HOH HOH . D 4 HOH A 48 650 169 HOH HOH . D 4 HOH A 49 651 76 HOH HOH . D 4 HOH A 50 652 1 HOH HOH . D 4 HOH A 51 653 109 HOH HOH . D 4 HOH A 52 654 53 HOH HOH . D 4 HOH A 53 655 80 HOH HOH . D 4 HOH A 54 656 81 HOH HOH . D 4 HOH A 55 657 131 HOH HOH . D 4 HOH A 56 658 88 HOH HOH . D 4 HOH A 57 659 50 HOH HOH . D 4 HOH A 58 660 62 HOH HOH . D 4 HOH A 59 661 37 HOH HOH . D 4 HOH A 60 662 179 HOH HOH . D 4 HOH A 61 663 44 HOH HOH . D 4 HOH A 62 664 103 HOH HOH . D 4 HOH A 63 665 102 HOH HOH . D 4 HOH A 64 666 137 HOH HOH . D 4 HOH A 65 667 110 HOH HOH . D 4 HOH A 66 668 52 HOH HOH . D 4 HOH A 67 669 85 HOH HOH . D 4 HOH A 68 670 147 HOH HOH . D 4 HOH A 69 671 9 HOH HOH . D 4 HOH A 70 672 4 HOH HOH . D 4 HOH A 71 673 157 HOH HOH . D 4 HOH A 72 674 59 HOH HOH . D 4 HOH A 73 675 74 HOH HOH . D 4 HOH A 74 676 72 HOH HOH . D 4 HOH A 75 677 126 HOH HOH . D 4 HOH A 76 678 123 HOH HOH . D 4 HOH A 77 679 54 HOH HOH . D 4 HOH A 78 680 34 HOH HOH . D 4 HOH A 79 681 11 HOH HOH . D 4 HOH A 80 682 149 HOH HOH . D 4 HOH A 81 683 51 HOH HOH . D 4 HOH A 82 684 69 HOH HOH . D 4 HOH A 83 685 42 HOH HOH . D 4 HOH A 84 686 138 HOH HOH . D 4 HOH A 85 687 21 HOH HOH . D 4 HOH A 86 688 71 HOH HOH . D 4 HOH A 87 689 8 HOH HOH . D 4 HOH A 88 690 66 HOH HOH . D 4 HOH A 89 691 112 HOH HOH . D 4 HOH A 90 692 160 HOH HOH . D 4 HOH A 91 693 95 HOH HOH . D 4 HOH A 92 694 150 HOH HOH . D 4 HOH A 93 695 60 HOH HOH . D 4 HOH A 94 696 26 HOH HOH . D 4 HOH A 95 697 39 HOH HOH . D 4 HOH A 96 698 20 HOH HOH . D 4 HOH A 97 699 67 HOH HOH . D 4 HOH A 98 700 64 HOH HOH . D 4 HOH A 99 701 6 HOH HOH . D 4 HOH A 100 702 5 HOH HOH . D 4 HOH A 101 703 12 HOH HOH . D 4 HOH A 102 704 27 HOH HOH . D 4 HOH A 103 705 97 HOH HOH . D 4 HOH A 104 706 13 HOH HOH . D 4 HOH A 105 707 10 HOH HOH . D 4 HOH A 106 708 19 HOH HOH . D 4 HOH A 107 709 121 HOH HOH . D 4 HOH A 108 710 24 HOH HOH . D 4 HOH A 109 711 22 HOH HOH . D 4 HOH A 110 712 113 HOH HOH . D 4 HOH A 111 713 145 HOH HOH . D 4 HOH A 112 714 136 HOH HOH . D 4 HOH A 113 715 33 HOH HOH . D 4 HOH A 114 716 30 HOH HOH . D 4 HOH A 115 717 92 HOH HOH . D 4 HOH A 116 718 57 HOH HOH . D 4 HOH A 117 719 48 HOH HOH . D 4 HOH A 118 720 68 HOH HOH . D 4 HOH A 119 721 49 HOH HOH . D 4 HOH A 120 722 36 HOH HOH . D 4 HOH A 121 723 101 HOH HOH . D 4 HOH A 122 724 38 HOH HOH . D 4 HOH A 123 725 116 HOH HOH . D 4 HOH A 124 726 86 HOH HOH . D 4 HOH A 125 727 18 HOH HOH . D 4 HOH A 126 728 3 HOH HOH . D 4 HOH A 127 729 61 HOH HOH . D 4 HOH A 128 730 170 HOH HOH . D 4 HOH A 129 731 47 HOH HOH . D 4 HOH A 130 732 32 HOH HOH . D 4 HOH A 131 733 183 HOH HOH . D 4 HOH A 132 734 151 HOH HOH . D 4 HOH A 133 735 23 HOH HOH . D 4 HOH A 134 736 115 HOH HOH . D 4 HOH A 135 737 78 HOH HOH . D 4 HOH A 136 738 133 HOH HOH . D 4 HOH A 137 739 153 HOH HOH . D 4 HOH A 138 740 125 HOH HOH . D 4 HOH A 139 741 165 HOH HOH . D 4 HOH A 140 742 117 HOH HOH . D 4 HOH A 141 743 134 HOH HOH . D 4 HOH A 142 744 182 HOH HOH . D 4 HOH A 143 745 159 HOH HOH . D 4 HOH A 144 746 146 HOH HOH . D 4 HOH A 145 747 163 HOH HOH . D 4 HOH A 146 748 93 HOH HOH . D 4 HOH A 147 749 98 HOH HOH . D 4 HOH A 148 750 70 HOH HOH . D 4 HOH A 149 751 178 HOH HOH . D 4 HOH A 150 752 75 HOH HOH . D 4 HOH A 151 753 171 HOH HOH . D 4 HOH A 152 754 107 HOH HOH . D 4 HOH A 153 755 167 HOH HOH . D 4 HOH A 154 756 141 HOH HOH . D 4 HOH A 155 757 83 HOH HOH . D 4 HOH A 156 758 173 HOH HOH . D 4 HOH A 157 759 177 HOH HOH . D 4 HOH A 158 760 174 HOH HOH . D 4 HOH A 159 761 135 HOH HOH . D 4 HOH A 160 762 99 HOH HOH . D 4 HOH A 161 763 164 HOH HOH . D 4 HOH A 162 764 96 HOH HOH . D 4 HOH A 163 765 161 HOH HOH . D 4 HOH A 164 766 35 HOH HOH . D 4 HOH A 165 767 111 HOH HOH . D 4 HOH A 166 768 106 HOH HOH . D 4 HOH A 167 769 104 HOH HOH . D 4 HOH A 168 770 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 9WC . . . C 3 2.442 -2.863 83.597 1 41.14 ? C10 9WC 502 A 1 HETATM 2 C C13 9WC . . . C 3 0.261 -1.794 84.908 1 44.66 ? C13 9WC 502 A 1 HETATM 3 C C15 9WC . . . C 3 1.164 -3.248 83.247 1 42.61 ? C15 9WC 502 A 1 HETATM 4 C C22 9WC . . . C 3 -0.6 -0.31 86.603 1 49.54 ? C22 9WC 502 A 1 HETATM 5 C C24 9WC . . . C 3 -3.585 -2.999 83.835 1 44.61 ? C24 9WC 502 A 1 HETATM 6 C C26 9WC . . . C 3 -5.236 -3.103 82.071 1 43.7 ? C26 9WC 502 A 1 HETATM 7 C C28 9WC . . . C 3 -5.76 -3.917 84.267 1 50.95 ? C28 9WC 502 A 1 HETATM 8 C C1 9WC . . . C 3 6.648 -5.785 82.656 1 40.97 ? C1 9WC 502 A 1 HETATM 9 C C2 9WC . . . C 3 6.806 -6.048 84.15 1 47.95 ? C2 9WC 502 A 1 HETATM 10 C C3 9WC . . . C 3 5.447 -6.362 84.766 1 47.51 ? C3 9WC 502 A 1 HETATM 11 C C4 9WC . . . C 3 4.532 -5.171 84.528 1 46.6 ? C4 9WC 502 A 1 HETATM 12 C C5 9WC . . . C 3 4.638 -4.435 83.194 1 39.71 ? C5 9WC 502 A 1 HETATM 13 C C6 9WC . . . C 3 5.651 -4.669 82.37 1 42.38 ? C6 9WC 502 A 1 HETATM 14 C C9 9WC . . . C 3 3.606 -3.405 82.784 1 42.76 ? C9 9WC 502 A 1 HETATM 15 C C11 9WC . . . C 3 2.644 -1.924 84.585 1 40.96 ? C11 9WC 502 A 1 HETATM 16 C C12 9WC . . . C 3 1.554 -1.393 85.249 1 44.21 ? C12 9WC 502 A 1 HETATM 17 C C14 9WC . . . C 3 0.07 -2.715 83.915 1 43.71 ? C14 9WC 502 A 1 HETATM 18 C C16 9WC . . . C 3 -1.183 -3.108 83.57 1 46.31 ? C16 9WC 502 A 1 HETATM 19 C C19 9WC . . . C 3 -2.042 -1.678 85.202 1 49.8 ? C19 9WC 502 A 1 HETATM 20 C C25 9WC . . . C 3 -3.972 -2.753 82.523 1 45.64 ? C25 9WC 502 A 1 HETATM 21 C C27 9WC . . . C 3 -6.132 -3.683 82.952 1 46.58 ? C27 9WC 502 A 1 HETATM 22 C C29 9WC . . . C 3 -4.489 -3.574 84.713 1 49.53 ? C29 9WC 502 A 1 HETATM 23 N N17 9WC . . . C 3 -0.789 -1.291 85.543 1 46.1 ? N17 9WC 502 A 1 HETATM 24 N N18 9WC . . . C 3 -2.235 -2.6 84.216 1 45.88 ? N18 9WC 502 A 1 HETATM 25 O O7 9WC . . . C 3 5.671 -4.087 81.089 1 33.73 ? O7 9WC 502 A 1 HETATM 26 O O8 9WC . . . C 3 3.764 -4.825 85.362 1 48.59 ? O8 9WC 502 A 1 HETATM 27 O O20 9WC . . . C 3 -1.325 -3.928 82.708 1 44.66 ? O20 9WC 502 A 1 HETATM 28 O O21 9WC . . . C 3 -2.976 -1.215 85.778 1 51.64 ? O21 9WC 502 A 1 HETATM 29 O O23 9WC . . . C 3 3.702 -2.898 81.706 1 37.08 ? O23 9WC 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 29 #