data_7X8H # _model_server_result.job_id MEGJFjI8ZCFg8gUvYFZ9Vw _model_server_result.datetime_utc '2024-10-22 07:39:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7X8H # _exptl.entry_id 7X8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.99 _cell.angle_gamma 90 _cell.entry_id 7X8H _cell.length_a 76.608 _cell.length_b 83.973 _cell.length_c 61.543 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7X8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 373 A CYS 401 1_555 A SG CYS 388 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 A NE2 HIS 198 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc2 A NE2 HIS 280 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc3 A OE1 GLU 366 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O17 AIY . A AIY 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O14 AIY . A AIY 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc6 B CO CO . A CO 501 1_555 D O HOH . A HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7X8H _atom_sites.fract_transf_matrix[1][1] 0.013053 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002772 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011909 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 1 CO CO . C 3 AIY A 1 502 501 AIY LIG . D 4 HOH A 1 601 99 HOH HOH . D 4 HOH A 2 602 32 HOH HOH . D 4 HOH A 3 603 64 HOH HOH . D 4 HOH A 4 604 103 HOH HOH . D 4 HOH A 5 605 98 HOH HOH . D 4 HOH A 6 606 123 HOH HOH . D 4 HOH A 7 607 43 HOH HOH . D 4 HOH A 8 608 57 HOH HOH . D 4 HOH A 9 609 44 HOH HOH . D 4 HOH A 10 610 27 HOH HOH . D 4 HOH A 11 611 55 HOH HOH . D 4 HOH A 12 612 16 HOH HOH . D 4 HOH A 13 613 25 HOH HOH . D 4 HOH A 14 614 83 HOH HOH . D 4 HOH A 15 615 38 HOH HOH . D 4 HOH A 16 616 33 HOH HOH . D 4 HOH A 17 617 92 HOH HOH . D 4 HOH A 18 618 29 HOH HOH . D 4 HOH A 19 619 8 HOH HOH . D 4 HOH A 20 620 96 HOH HOH . D 4 HOH A 21 621 21 HOH HOH . D 4 HOH A 22 622 67 HOH HOH . D 4 HOH A 23 623 86 HOH HOH . D 4 HOH A 24 624 90 HOH HOH . D 4 HOH A 25 625 56 HOH HOH . D 4 HOH A 26 626 87 HOH HOH . D 4 HOH A 27 627 28 HOH HOH . D 4 HOH A 28 628 13 HOH HOH . D 4 HOH A 29 629 11 HOH HOH . D 4 HOH A 30 630 49 HOH HOH . D 4 HOH A 31 631 36 HOH HOH . D 4 HOH A 32 632 5 HOH HOH . D 4 HOH A 33 633 23 HOH HOH . D 4 HOH A 34 634 60 HOH HOH . D 4 HOH A 35 635 1 HOH HOH . D 4 HOH A 36 636 89 HOH HOH . D 4 HOH A 37 637 12 HOH HOH . D 4 HOH A 38 638 114 HOH HOH . D 4 HOH A 39 639 48 HOH HOH . D 4 HOH A 40 640 58 HOH HOH . D 4 HOH A 41 641 31 HOH HOH . D 4 HOH A 42 642 69 HOH HOH . D 4 HOH A 43 643 4 HOH HOH . D 4 HOH A 44 644 115 HOH HOH . D 4 HOH A 45 645 46 HOH HOH . D 4 HOH A 46 646 93 HOH HOH . D 4 HOH A 47 647 30 HOH HOH . D 4 HOH A 48 648 53 HOH HOH . D 4 HOH A 49 649 15 HOH HOH . D 4 HOH A 50 650 72 HOH HOH . D 4 HOH A 51 651 19 HOH HOH . D 4 HOH A 52 652 118 HOH HOH . D 4 HOH A 53 653 17 HOH HOH . D 4 HOH A 54 654 105 HOH HOH . D 4 HOH A 55 655 124 HOH HOH . D 4 HOH A 56 656 37 HOH HOH . D 4 HOH A 57 657 97 HOH HOH . D 4 HOH A 58 658 88 HOH HOH . D 4 HOH A 59 659 73 HOH HOH . D 4 HOH A 60 660 41 HOH HOH . D 4 HOH A 61 661 76 HOH HOH . D 4 HOH A 62 662 77 HOH HOH . D 4 HOH A 63 663 84 HOH HOH . D 4 HOH A 64 664 34 HOH HOH . D 4 HOH A 65 665 59 HOH HOH . D 4 HOH A 66 666 6 HOH HOH . D 4 HOH A 67 667 110 HOH HOH . D 4 HOH A 68 668 18 HOH HOH . D 4 HOH A 69 669 101 HOH HOH . D 4 HOH A 70 670 109 HOH HOH . D 4 HOH A 71 671 22 HOH HOH . D 4 HOH A 72 672 62 HOH HOH . D 4 HOH A 73 673 51 HOH HOH . D 4 HOH A 74 674 91 HOH HOH . D 4 HOH A 75 675 39 HOH HOH . D 4 HOH A 76 676 122 HOH HOH . D 4 HOH A 77 677 126 HOH HOH . D 4 HOH A 78 678 80 HOH HOH . D 4 HOH A 79 679 94 HOH HOH . D 4 HOH A 80 680 45 HOH HOH . D 4 HOH A 81 681 52 HOH HOH . D 4 HOH A 82 682 112 HOH HOH . D 4 HOH A 83 683 50 HOH HOH . D 4 HOH A 84 684 54 HOH HOH . D 4 HOH A 85 685 63 HOH HOH . D 4 HOH A 86 686 9 HOH HOH . D 4 HOH A 87 687 14 HOH HOH . D 4 HOH A 88 688 61 HOH HOH . D 4 HOH A 89 689 100 HOH HOH . D 4 HOH A 90 690 65 HOH HOH . D 4 HOH A 91 691 3 HOH HOH . D 4 HOH A 92 692 107 HOH HOH . D 4 HOH A 93 693 104 HOH HOH . D 4 HOH A 94 694 70 HOH HOH . D 4 HOH A 95 695 24 HOH HOH . D 4 HOH A 96 696 78 HOH HOH . D 4 HOH A 97 697 125 HOH HOH . D 4 HOH A 98 698 81 HOH HOH . D 4 HOH A 99 699 106 HOH HOH . D 4 HOH A 100 700 82 HOH HOH . D 4 HOH A 101 701 40 HOH HOH . D 4 HOH A 102 702 68 HOH HOH . D 4 HOH A 103 703 7 HOH HOH . D 4 HOH A 104 704 10 HOH HOH . D 4 HOH A 105 705 95 HOH HOH . D 4 HOH A 106 706 74 HOH HOH . D 4 HOH A 107 707 20 HOH HOH . D 4 HOH A 108 708 119 HOH HOH . D 4 HOH A 109 709 129 HOH HOH . D 4 HOH A 110 710 35 HOH HOH . D 4 HOH A 111 711 42 HOH HOH . D 4 HOH A 112 712 85 HOH HOH . D 4 HOH A 113 713 47 HOH HOH . D 4 HOH A 114 714 2 HOH HOH . D 4 HOH A 115 715 26 HOH HOH . D 4 HOH A 116 716 71 HOH HOH . D 4 HOH A 117 717 66 HOH HOH . D 4 HOH A 118 718 75 HOH HOH . D 4 HOH A 119 719 108 HOH HOH . D 4 HOH A 120 720 127 HOH HOH . D 4 HOH A 121 721 111 HOH HOH . D 4 HOH A 122 722 113 HOH HOH . D 4 HOH A 123 723 116 HOH HOH . D 4 HOH A 124 724 120 HOH HOH . D 4 HOH A 125 725 102 HOH HOH . D 4 HOH A 126 726 128 HOH HOH . D 4 HOH A 127 727 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.703 _atom_site.Cartn_y 0.465 _atom_site.Cartn_z 18.651 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 94 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #