data_7X8O # _model_server_result.job_id oDGFUcZ9mymUJAhdntU-SQ _model_server_result.datetime_utc '2024-10-19 17:24:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7x8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 7X8O # _exptl.entry_id 7X8O _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 320.319 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' THM 1 X THM 1 1_555 A P DG 2 X DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.614 ? hydrog TYPE_6_PAIR hydrog1 A N1 DG 4 X DG 4 1_555 A O6 DG 8 X DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog2 A N2 DG 4 X DG 4 1_555 A N7 DG 8 X DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog3 A N7 DG 4 X DG 4 1_555 A N2 DG 20 X DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog4 A O6 DG 4 X DG 4 1_555 A N1 DG 20 X DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog5 A N1 DG 5 X DG 5 1_555 A O6 DG 9 X DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog6 A N2 DG 5 X DG 5 1_555 A N7 DG 9 X DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog7 A N7 DG 5 X DG 5 1_555 A N2 DG 21 X DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog8 A O6 DG 5 X DG 5 1_555 A N1 DG 21 X DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog9 A N1 DG 6 X DG 6 1_555 A O6 DG 11 X DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog10 A N2 DG 6 X DG 6 1_555 A N7 DG 11 X DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog11 A N7 DG 6 X DG 6 1_555 A N2 DG 22 X DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog12 A O6 DG 6 X DG 6 1_555 A N1 DG 22 X DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog13 A N1 DG 8 X DG 8 1_555 A O6 DG 13 X DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog14 A N2 DG 8 X DG 8 1_555 A N7 DG 13 X DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog15 A N1 DG 9 X DG 9 1_555 A O6 DG 14 X DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog16 A N2 DG 9 X DG 9 1_555 A N7 DG 14 X DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog17 A N1 DG 11 X DG 11 1_555 A O6 DG 15 X DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog18 A N2 DG 11 X DG 11 1_555 A N7 DG 15 X DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog19 A N1 DG 13 X DG 13 1_555 A O6 DG 20 X DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog20 A N2 DG 13 X DG 13 1_555 A N7 DG 20 X DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog21 A N1 DG 14 X DG 14 1_555 A O6 DG 21 X DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog22 A N2 DG 14 X DG 14 1_555 A N7 DG 21 X DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog23 A N1 DG 15 X DG 15 1_555 A O6 DG 22 X DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog24 A N2 DG 15 X DG 15 1_555 A N7 DG 22 X DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DA-DA MISPAIR' hydrog25 A N7 DA 17 X DA 17 1_555 A N6 DA 19 X DA 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C19 H14 N O4 1' _chem_comp.formula_weight 320.319 _chem_comp.id KPT _chem_comp.mon_nstd_flag . _chem_comp.name 6,7-dihydro[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquino[3,2-a]isoquinolin-5-ium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Coptisine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C36 KPT sing 150 n n O3 C36 KPT sing 151 n n C18 O3 KPT sing 152 n n C13 C14 KPT sing 153 n y C13 C18 KPT sing 154 n y C17 C18 KPT doub 155 n y C17 O4 KPT sing 156 n n C16 C17 KPT sing 157 n y C15 C12 KPT sing 158 n y C15 C16 KPT doub 159 n y C12 C13 KPT doub 160 n y C11 C10 KPT doub 161 n y C11 C12 KPT sing 162 n y C10 N KPT sing 163 n y N C9 KPT sing 164 n n N C14 KPT doub 165 n y C8 C9 KPT sing 166 n n C6 C5 KPT sing 167 n y C6 C10 KPT sing 168 n n C5 C8 KPT sing 169 n n C4 C5 KPT doub 170 n y C7 C6 KPT doub 171 n y C3 C2 KPT doub 172 n y C3 C7 KPT sing 173 n y C2 C4 KPT sing 174 n y O2 C2 KPT sing 175 n n O1 C3 KPT sing 176 n n C1 O1 KPT sing 177 n n C1 O2 KPT sing 178 n n C36 H1 KPT sing 179 n n C36 H21 KPT sing 180 n n C14 H2 KPT sing 181 n n C16 H3 KPT sing 182 n n C15 H4 KPT sing 183 n n C11 H5 KPT sing 184 n n C9 H6 KPT sing 185 n n C9 H7 KPT sing 186 n n C8 H8 KPT sing 187 n n C8 H9 KPT sing 188 n n C4 H10 KPT sing 189 n n C7 H11 KPT sing 190 n n C1 H12 KPT sing 191 n n C1 H14 KPT sing 192 n n # _atom_sites.entry_id 7X8O _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KPT X 1 101 25 KPT LIG . C 2 KPT X 1 102 26 KPT LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C36 KPT . . . C 2 23.65 21.476 30.84 1 0 ? C36 KPT 102 X 1 HETATM 2 O O4 KPT . . . C 2 24.279 21.031 32.078 1 0 ? O4 KPT 102 X 1 HETATM 3 O O3 KPT . . . C 2 24.73 21.546 29.863 1 0 ? O3 KPT 102 X 1 HETATM 4 C C18 KPT . . . C 2 25.883 21.216 30.513 1 0 ? C18 KPT 102 X 1 HETATM 5 C C13 KPT . . . C 2 27.191 21.201 30.008 1 0 ? C13 KPT 102 X 1 HETATM 6 C C14 KPT . . . C 2 27.478 21.519 28.674 1 0 ? C14 KPT 102 X 1 HETATM 7 C C17 KPT . . . C 2 25.612 20.914 31.832 1 0 ? C17 KPT 102 X 1 HETATM 8 C C16 KPT . . . C 2 26.631 20.59 32.733 1 0 ? C16 KPT 102 X 1 HETATM 9 C C15 KPT . . . C 2 27.958 20.583 32.246 1 0 ? C15 KPT 102 X 1 HETATM 10 C C12 KPT . . . C 2 28.234 20.867 30.891 1 0 ? C12 KPT 102 X 1 HETATM 11 C C11 KPT . . . C 2 29.546 20.794 30.406 1 0 ? C11 KPT 102 X 1 HETATM 12 C C10 KPT . . . C 2 29.839 21.091 29.054 1 0 ? C10 KPT 102 X 1 HETATM 13 N N KPT . . . C 2 28.804 21.611 28.247 1 0 ? N KPT 102 X 1 HETATM 14 C C9 KPT . . . C 2 29.127 22.394 27.05 1 0 ? C9 KPT 102 X 1 HETATM 15 C C8 KPT . . . C 2 30.216 21.693 26.229 1 0 ? C8 KPT 102 X 1 HETATM 16 C C6 KPT . . . C 2 31.147 20.932 28.499 1 0 ? C6 KPT 102 X 1 HETATM 17 C C5 KPT . . . C 2 31.366 21.256 27.12 1 0 ? C5 KPT 102 X 1 HETATM 18 C C4 KPT . . . C 2 32.642 21.147 26.535 1 0 ? C4 KPT 102 X 1 HETATM 19 C C7 KPT . . . C 2 32.248 20.449 29.27 1 0 ? C7 KPT 102 X 1 HETATM 20 C C3 KPT . . . C 2 33.496 20.333 28.648 1 0 ? C3 KPT 102 X 1 HETATM 21 C C2 KPT . . . C 2 33.688 20.688 27.33 1 0 ? C2 KPT 102 X 1 HETATM 22 O O2 KPT . . . C 2 34.976 20.461 26.962 1 0 ? O2 KPT 102 X 1 HETATM 23 O O1 KPT . . . C 2 34.659 19.874 29.184 1 0 ? O1 KPT 102 X 1 HETATM 24 C C1 KPT . . . C 2 35.627 19.818 28.094 1 0 ? C1 KPT 102 X 1 HETATM 25 H H1 KPT . . . C 2 23.203 22.469 30.98 1 0 ? H1 KPT 102 X 1 HETATM 26 H H21 KPT . . . C 2 22.885 20.758 30.517 1 0 ? H21 KPT 102 X 1 HETATM 27 H H2 KPT . . . C 2 26.692 21.784 27.966 1 0 ? H2 KPT 102 X 1 HETATM 28 H H3 KPT . . . C 2 26.396 20.364 33.772 1 0 ? H3 KPT 102 X 1 HETATM 29 H H4 KPT . . . C 2 28.783 20.386 32.923 1 0 ? H4 KPT 102 X 1 HETATM 30 H H5 KPT . . . C 2 30.321 20.486 31.094 1 0 ? H5 KPT 102 X 1 HETATM 31 H H6 KPT . . . C 2 28.235 22.55 26.431 1 0 ? H6 KPT 102 X 1 HETATM 32 H H7 KPT . . . C 2 29.491 23.375 27.385 1 0 ? H7 KPT 102 X 1 HETATM 33 H H8 KPT . . . C 2 29.789 20.811 25.734 1 0 ? H8 KPT 102 X 1 HETATM 34 H H9 KPT . . . C 2 30.57 22.36 25.434 1 0 ? H9 KPT 102 X 1 HETATM 35 H H10 KPT . . . C 2 32.818 21.385 25.493 1 0 ? H10 KPT 102 X 1 HETATM 36 H H11 KPT . . . C 2 32.185 20.159 30.312 1 0 ? H11 KPT 102 X 1 HETATM 37 H H12 KPT . . . C 2 35.847 18.77 27.848 1 0 ? H12 KPT 102 X 1 HETATM 38 H H14 KPT . . . C 2 36.55 20.347 28.363 1 0 ? H14 KPT 102 X 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 2643 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 38 #